5 homologs were found in PanDaTox collection
for query gene Francci3_1202 on replicon NC_007777
Organism: Frankia sp. CcI3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007777  Francci3_1202  excisionase/Xis, DNA-binding  100 
 
 
108 aa  211  2.9999999999999995e-54  Frankia sp. CcI3  Bacteria  hitchhiker  0.00214116  normal  0.689393 
 
 
-
 
NC_009380  Strop_0059  DNA binding domain-containing protein  59.42 
 
 
85 aa  89  2e-17  Salinispora tropica CNB-440  Bacteria  normal  0.189641  normal 
 
 
-
 
NC_013131  Caci_8559  DNA binding domain protein, excisionase family  48.08 
 
 
69 aa  55.1  0.0000003  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.13355  hitchhiker  0.000467423 
 
 
-
 
NC_012791  Vapar_4598  DNA binding domain protein, excisionase family  37.74 
 
 
76 aa  40.8  0.007  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_0040  hypothetical protein  58.33 
 
 
49 aa  40.8  0.007  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
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