16 homologs were found in PanDaTox collection
for query gene Francci3_1200 on replicon NC_007777
Organism: Frankia sp. CcI3



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007777  Francci3_1200  excisionase/Xis, DNA-binding  100 
 
 		 98 aa  195  2.0000000000000003e-49  Frankia sp. CcI3  Bacteria  decreased coverage  0.00000791415  normal  0.674457 
 
 
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NC_014212  Mesil_0057  DNA binding domain protein, excisionase family  32.84 
 
 		 126 aa  47.8  0.00005  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  1 
 
 
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NC_010507  Mrad2831_6523  prophage CP4-57 regulatory  39.68 
 
 		 69 aa  46.2  0.0001  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  n/a   
 
 
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NC_013946  Mrub_1410  DNA binding domain-containing protein, excisionase family  42 
 
 		 73 aa  46.6  0.0001  Meiothermus ruber DSM 1279  Bacteria  normal  0.251698  normal  0.111999 
 
 
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NC_013159  Svir_02760  DNA-binding protein, excisionase family  38.3 
 
 		 71 aa  44.7  0.0005  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  1 
 
 
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NC_002936  DET0882  excisionase family DNA-binding protein  42.86 
 
 		 74 aa  44.3  0.0006  Dehalococcoides ethenogenes 195  Bacteria  hitchhiker  0.000814624  n/a   
 
 
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NC_014212  Mesil_1745  DNA binding domain protein, excisionase family  37.25 
 
 		 68 aa  44.3  0.0006  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  0.453337 
 
 
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NC_012034  Athe_1985  DNA binding domain protein, excisionase family  37.74 
 
 		 71 aa  43.5  0.001  Anaerocellum thermophilum DSM 6725  Bacteria  unclonable  0.000000000030807  n/a   
 
 
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NC_013385  Adeg_0025  DNA binding domain protein, excisionase family  38.78 
 
 		 63 aa  43.5  0.001  Ammonifex degensii KC4  Bacteria  normal  0.917253  n/a   
 
 
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NC_014148  Plim_0991  DNA binding domain protein, excisionase family  41.86 
 
 		 70 aa  41.2  0.004  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.153101  n/a   
 
 
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NC_009664  Krad_0612  phage transcriptional regulator, AlpA  40 
 
 		 66 aa  41.2  0.005  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.274045  normal  0.0916726 
 
 
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NC_014212  Mesil_1579  DNA binding domain protein, excisionase family  35.59 
 
 		 68 aa  41.2  0.005  Meiothermus silvanus DSM 9946  Bacteria  normal  0.963252  normal  0.220961 
 
 
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NC_013411  GYMC61_0812  DNA binding domain protein, excisionase family  38.3 
 
 		 308 aa  40.8  0.006  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
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NC_013235  Namu_0912  DNA binding domain protein, excisionase family  34.38 
 
 		 78 aa  40.8  0.007  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
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NC_014158  Tpau_0661  DNA binding domain protein, excisionase family  30.3 
 
 		 80 aa  40.8  0.007  Tsukamurella paurometabola DSM 20162  Bacteria  normal  1  n/a   
 
 
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NC_013235  Namu_1373  DNA binding domain protein, excisionase family  34.69 
 
 		 76 aa  40.4  0.009  Nakamurella multipartita DSM 44233  Bacteria  normal  0.150452  normal  0.608201 
 
 
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