More than 300 homologs were found in PanDaTox collection
for query gene Francci3_0053 on replicon NC_007777
Organism: Frankia sp. CcI3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009338  Mflv_0430  acyl-CoA dehydrogenase domain-containing protein  60.71 
 
 
611 aa  746  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.377352 
 
 
-
 
NC_008146  Mmcs_0242  acyl-CoA dehydrogenase-like protein  63.15 
 
 
611 aa  774  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_1531  acyl-CoA dehydrogenase domain-containing protein  57.58 
 
 
615 aa  707  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_008705  Mkms_2662  acyl-CoA dehydrogenase domain-containing protein  55.59 
 
 
611 aa  660  Mycobacterium sp. KMS  Bacteria  normal  0.139362  normal 
 
 
-
 
NC_008146  Mmcs_1508  acyl-CoA dehydrogenase-like protein  57.58 
 
 
615 aa  707  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_0210  putative acyl-CoA dehydrogenase  66.94 
 
 
607 aa  819  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_0265  acyl-CoA dehydrogenase domain-containing protein  63.64 
 
 
611 aa  781  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.746207  normal  0.13974 
 
 
-
 
NC_009338  Mflv_0409  acyl-CoA dehydrogenase domain-containing protein  62.34 
 
 
611 aa  772  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.0268074 
 
 
-
 
NC_008146  Mmcs_2618  acyl-CoA dehydrogenase-like protein  55.59 
 
 
611 aa  660  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_8827  acyl-CoA dehydrogenase domain protein  59.51 
 
 
609 aa  736  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_6963  acyl-CoA dehydrogenase domain protein  65.65 
 
 
612 aa  831  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_0089  acyl-CoA dehydrogenase domain-containing protein  60.74 
 
 
617 aa  743  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_2647  acyl-CoA dehydrogenase domain-containing protein  55.43 
 
 
611 aa  656  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_0238  acyl-CoA dehydrogenase domain-containing protein  60.39 
 
 
611 aa  744  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.138949 
 
 
-
 
NC_007777  Francci3_0053  acyl-CoA dehydrogenase-like  100 
 
 
614 aa  1244  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_4429  acyl-CoA dehydrogenase domain-containing protein  63.62 
 
 
621 aa  787  Nocardioides sp. JS614  Bacteria  decreased coverage  0.00413349  n/a   
 
 
-
 
NC_009077  Mjls_0232  acyl-CoA dehydrogenase domain-containing protein  62.99 
 
 
611 aa  772  Mycobacterium sp. JLS  Bacteria  normal  normal  0.235095 
 
 
-
 
NC_009953  Sare_0086  acyl-CoA dehydrogenase domain-containing protein  61.06 
 
 
617 aa  745  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0567626 
 
 
-
 
NC_008705  Mkms_0252  acyl-CoA dehydrogenase domain-containing protein  63.15 
 
 
611 aa  774  Mycobacterium sp. KMS  Bacteria  normal  normal  0.104888 
 
 
-
 
NC_013159  Svir_38750  acyl-CoA dehydrogenase  65.91 
 
 
614 aa  832  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.802749  normal 
 
 
-
 
NC_014211  Ndas_5441  acyl-CoA dehydrogenase domain protein  63.36 
 
 
605 aa  794  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_11495  acyl-CoA dehydrogenase fadE15  56.82 
 
 
609 aa  691  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  4.43492e-12  normal  0.167351 
 
 
-
 
NC_014165  Tbis_3327  acyl-CoA dehydrogenase domain-containing protein  67.75 
 
 
610 aa  862  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.429773 
 
 
-
 
NC_009565  TBFG_10247  acyl-CoA dehydrogenase fadE5  62.5 
 
 
611 aa  760  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_3018  acyl-CoA dehydrogenase domain-containing protein  80.13 
 
 
619 aa  1033  Frankia sp. EAN1pec  Bacteria  normal  0.238191  normal 
 
 
-
 
NC_014158  Tpau_0434  acyl-CoA dehydrogenase domain protein  56.56 
 
 
610 aa  679  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_5917  acyl-CoA dehydrogenase domain-containing protein  59.71 
 
 
616 aa  705  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_4833  acyl-CoA dehydrogenase domain protein  63.06 
 
 
614 aa  765  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_0271  acyl-CoA dehydrogenase domain protein  65.53 
 
 
610 aa  840  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_5295  acyl-CoA dehydrogenase domain protein  65.59 
 
 
621 aa  821  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_7271  acyl-CoA dehydrogenase domain-containing protein  80.13 
 
 
609 aa  1034  Frankia sp. EAN1pec  Bacteria  normal  normal  0.319436 
 
 
-
 
NC_013595  Sros_8960  acyl-CoA dehydrogenase  64.5 
 
 
607 aa  811  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_4420  acyl-CoA dehydrogenase domain protein  61.69 
 
 
611 aa  777  Gordonia bronchialis DSM 43247  Bacteria  normal  0.921318  n/a   
 
 
-
 
NC_013169  Ksed_26500  acyl-CoA dehydrogenase  63.3 
 
 
617 aa  773  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal  0.348729 
 
 
-
 
NC_009077  Mjls_1508  acyl-CoA dehydrogenase domain-containing protein  58.6 
 
 
633 aa  621  1e-176  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_1305  acyl-CoA dehydrogenase domain-containing protein  37.06 
 
 
604 aa  393  1e-108  Desulfococcus oleovorans Hxd3  Bacteria  decreased coverage  7.12718e-07  n/a   
 
 
-
 
NC_013440  Hoch_5060  acyl-CoA dehydrogenase domain protein  36.94 
 
 
609 aa  367  1e-100  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_2366  acyl-CoA dehydrogenase domain-containing protein  36.16 
 
 
601 aa  367  1e-100  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  7.27045e-07  n/a   
 
 
-
 
NC_009943  Dole_2164  acyl-CoA dehydrogenase domain-containing protein  34.42 
 
 
605 aa  345  1e-93  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  5.83422e-07  n/a   
 
 
-
 
NC_007517  Gmet_2270  Acyl-CoA dehydrogenase-like  34.81 
 
 
615 aa  342  8e-93  Geobacter metallireducens GS-15  Bacteria  hitchhiker  2.47308e-07  hitchhiker  0.000246655 
 
 
-
 
NC_007517  Gmet_2211  Acyl-CoA dehydrogenase-like  35.64 
 
 
615 aa  328  2e-88  Geobacter metallireducens GS-15  Bacteria  normal  0.0172956  normal  0.0102784 
 
 
-
 
NC_011004  Rpal_0885  acyl-CoA dehydrogenase domain protein  35.54 
 
 
596 aa  327  5e-88  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.894915  n/a   
 
 
-
 
NC_012856  Rpic12D_0363  acyl-CoA dehydrogenase domain protein  34.79 
 
 
595 aa  326  7e-88  Ralstonia pickettii 12D  Bacteria  normal  0.84094  normal 
 
 
-
 
NC_008836  BMA10229_A2330  acyl-CoA dehydrogenase domain-containing protein  35.54 
 
 
595 aa  325  1e-87  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_2410  acyl-CoA dehydrogenase domain-containing protein  35.54 
 
 
595 aa  325  1e-87  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA0197  acyl-CoA dehydrogenase domain-containing protein  35.54 
 
 
595 aa  325  1e-87  Burkholderia mallei ATCC 23344  Bacteria  normal  0.908056  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2748  acyl-CoA dehydrogenase domain-containing protein  35.54 
 
 
595 aa  325  1e-87  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A0446  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  34.99 
 
 
595 aa  325  1e-87  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_2393  acyl-CoA dehydrogenase domain-containing protein  36.45 
 
 
596 aa  325  2e-87  Delftia acidovorans SPH-1  Bacteria  normal  0.687624  normal 
 
 
-
 
NC_010682  Rpic_0348  acyl-CoA dehydrogenase domain protein  34.89 
 
 
595 aa  325  2e-87  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A0419  putative acyl-CoA dehydrogenase oxidoreductase protein  36.98 
 
 
596 aa  323  4e-87  Methylibium petroleiphilum PM1  Bacteria  normal  0.232992  normal 
 
 
-
 
NC_003295  RSc0473  putative acyl-CoA dehydrogenase oxidoreductase protein  34.57 
 
 
595 aa  323  6e-87  Ralstonia solanacearum GMI1000  Bacteria  normal  0.390432  normal 
 
 
-
 
NC_007973  Rmet_0385  acyl-CoA dehydrogenase-like protein  35.1 
 
 
595 aa  322  1e-86  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.13259 
 
 
-
 
NC_009076  BURPS1106A_0695  acyl-CoA dehydrogenase domain-containing protein  35.38 
 
 
595 aa  321  2e-86  Burkholderia pseudomallei 1106a  Bacteria  normal  0.832914  n/a   
 
 
-
 
NC_009074  BURPS668_0680  acyl-CoA dehydrogenase domain-containing protein  35.38 
 
 
595 aa  321  2e-86  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_0857  acyl-CoA dehydrogenase domain-containing protein  35.38 
 
 
595 aa  321  2e-86  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_0385  acyl-CoA dehydrogenase domain-containing protein  34.89 
 
 
595 aa  321  3e-86  Burkholderia phymatum STM815  Bacteria  normal  0.840786  normal  0.461604 
 
 
-
 
NC_008740  Maqu_0515  acyl-CoA dehydrogenase domain-containing protein  35.12 
 
 
591 aa  321  3e-86  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I0564  acyl-CoA dehydrogenase domain-containing protein  35.22 
 
 
595 aa  320  5e-86  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_4606  Acyl-CoA dehydrogenase-like  35.1 
 
 
596 aa  320  7e-86  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.504166  normal 
 
 
-
 
NC_007958  RPD_0804  acyl-CoA dehydrogenase-like  34.52 
 
 
596 aa  319  1e-85  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_010551  BamMC406_2639  acyl-CoA dehydrogenase domain-containing protein  34.95 
 
 
595 aa  318  1e-85  Burkholderia ambifaria MC40-6  Bacteria  normal  0.0601004  normal  0.257028 
 
 
-
 
NC_007510  Bcep18194_A6048  Acyl-CoA dehydrogenase-like  34.57 
 
 
599 aa  319  1e-85  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_010508  Bcenmc03_2748  acyl-CoA dehydrogenase domain-containing protein  34.89 
 
 
595 aa  318  3e-85  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.139086  normal 
 
 
-
 
NC_008060  Bcen_2109  acyl-CoA dehydrogenase-like  34.89 
 
 
595 aa  318  3e-85  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_2721  acyl-CoA dehydrogenase domain-containing protein  34.89 
 
 
595 aa  318  3e-85  Burkholderia cenocepacia HI2424  Bacteria  normal  0.440911  n/a   
 
 
-
 
NC_012850  Rleg_0241  acyl-CoA dehydrogenase domain protein  34.31 
 
 
598 aa  317  4e-85  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.471224  normal 
 
 
-
 
NC_009484  Acry_0007  acyl-CoA dehydrogenase domain-containing protein  33.93 
 
 
596 aa  317  5e-85  Acidiphilium cryptum JF-5  Bacteria  normal  0.419421  n/a   
 
 
-
 
NC_011989  Avi_0599  acyl-CoA dehydrogenase  33.98 
 
 
597 aa  316  7e-85  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_010084  Bmul_0578  acyl-CoA dehydrogenase domain-containing protein  34.89 
 
 
595 aa  316  7e-85  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_3569  acyl-CoA dehydrogenase domain protein  35.06 
 
 
596 aa  316  8e-85  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.452125 
 
 
-
 
NC_010172  Mext_3245  acyl-CoA dehydrogenase domain-containing protein  35.06 
 
 
596 aa  316  8e-85  Methylobacterium extorquens PA1  Bacteria  normal  0.532993  normal  0.0328142 
 
 
-
 
NC_004311  BRA0795  acyl-CoA dehydrogenase family protein  33.44 
 
 
597 aa  316  8e-85  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009504  BOV_A0746  acyl-CoA dehydrogenase family protein  33.44 
 
 
597 aa  316  8e-85  Brucella ovis ATCC 25840  Bacteria  normal  0.398029  n/a   
 
 
-
 
NC_010511  M446_3278  acyl-CoA dehydrogenase domain-containing protein  34.25 
 
 
597 aa  316  9e-85  Methylobacterium sp. 4-46  Bacteria  normal  0.556327  normal  0.981132 
 
 
-
 
NC_012792  Vapar_5356  acyl-CoA dehydrogenase domain protein  35.88 
 
 
592 aa  315  1e-84  Variovorax paradoxus S110  Bacteria  normal  0.253086  n/a   
 
 
-
 
NC_008782  Ajs_2808  acyl-CoA dehydrogenase domain-containing protein  35.76 
 
 
596 aa  315  1e-84  Acidovorax sp. JS42  Bacteria  normal  0.612856  normal  0.525867 
 
 
-
 
NC_009485  BBta_0815  putative acyl-CoA dehydrogenase  33.76 
 
 
596 aa  315  1e-84  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.809407 
 
 
-
 
NC_011992  Dtpsy_2297  acyl-CoA dehydrogenase domain protein  35.76 
 
 
596 aa  315  1e-84  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_0146  acyl-CoA dehydrogenase domain-containing protein  33.71 
 
 
598 aa  315  2e-84  Sinorhizobium medicae WSM419  Bacteria  normal  0.986474  normal  0.238183 
 
 
-
 
NC_010681  Bphyt_0661  acyl-CoA dehydrogenase domain protein  35.62 
 
 
595 aa  315  2e-84  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_1402  acyl-CoA dehydrogenase domain-containing protein  35.15 
 
 
619 aa  314  3e-84  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.55208 
 
 
-
 
NC_009668  Oant_4033  acyl-CoA dehydrogenase domain-containing protein  32.95 
 
 
597 aa  314  3e-84  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.795877  n/a   
 
 
-
 
NC_010725  Mpop_3441  acyl-CoA dehydrogenase domain protein  35.21 
 
 
596 aa  314  3e-84  Methylobacterium populi BJ001  Bacteria  normal  0.189286  normal 
 
 
-
 
NC_007336  Reut_C6066  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  34.15 
 
 
598 aa  313  8e-84  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A4038  putative acyl-CoA dehydrogenase oxidoreductase  35.46 
 
 
595 aa  313  8e-84  Burkholderia xenovorans LB400  Bacteria  normal  0.922091  normal  0.0585748 
 
 
-
 
NC_008044  TM1040_1557  acyl-CoA dehydrogenase-like  32.63 
 
 
593 aa  312  9e-84  Ruegeria sp. TM1040  Bacteria  normal  normal  0.538695 
 
 
-
 
NC_009439  Pmen_3101  acyl-CoA dehydrogenase domain-containing protein  35.32 
 
 
592 aa  311  2e-83  Pseudomonas mendocina ymp  Bacteria  normal  0.165418  normal 
 
 
-
 
NC_007925  RPC_0737  acyl-CoA dehydrogenase-like  35 
 
 
596 aa  311  3e-83  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.67515 
 
 
-
 
NC_010524  Lcho_2538  acyl-CoA dehydrogenase domain-containing protein  35.97 
 
 
596 aa  310  4e-83  Leptothrix cholodnii SP-6  Bacteria  n/a    decreased coverage  0.000216055 
 
 
-
 
NC_010676  Bphyt_5032  acyl-CoA dehydrogenase domain protein  36.8 
 
 
601 aa  310  5e-83  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.690717 
 
 
-
 
NC_008789  Hhal_1493  acyl-CoA dehydrogenase domain-containing protein  37.13 
 
 
593 aa  310  7e-83  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_011666  Msil_1741  acyl-CoA dehydrogenase domain protein  33.12 
 
 
594 aa  309  9e-83  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_009511  Swit_3797  acyl-CoA dehydrogenase domain-containing protein  34.14 
 
 
596 aa  309  1e-82  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.163707 
 
 
-
 
NC_011369  Rleg2_0213  acyl-CoA dehydrogenase domain protein  33.77 
 
 
598 aa  309  1e-82  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_4089  acyl-CoA dehydrogenase domain-containing protein  35.82 
 
 
601 aa  309  1e-82  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_1555  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  34.66 
 
 
597 aa  308  2e-82  Dechloromonas aromatica RCB  Bacteria  hitchhiker  0.000406482  normal  0.0195693 
 
 
-
 
NC_008782  Ajs_0592  acyl-CoA dehydrogenase domain-containing protein  34.67 
 
 
598 aa  308  2e-82  Acidovorax sp. JS42  Bacteria  normal  normal  0.559108 
 
 
-
 
NC_012791  Vapar_3372  acyl-CoA dehydrogenase domain protein  34.31 
 
 
596 aa  308  2e-82  Variovorax paradoxus S110  Bacteria  normal  0.272289  n/a   
 
 
-
 
NC_007948  Bpro_3957  acyl-CoA dehydrogenase-like  34.09 
 
 
598 aa  307  5e-82  Polaromonas sp. JS666  Bacteria  normal  0.574903  normal 
 
 
-
 
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