16 homologs were found in PanDaTox collection
for query gene Francci3_0019 on replicon NC_007777
Organism: Frankia sp. CcI3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007777  Francci3_0019  hypothetical protein  100 
 
 
206 aa  415  1e-115  Frankia sp. CcI3  Bacteria  normal  0.570283  normal 
 
 
-
 
NC_013124  Afer_0987  CRISPR-associated protein, Cse2 family  39.75 
 
 
190 aa  101  7e-21  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_1534  Cse2 family CRISPR-associated protein  36.84 
 
 
220 aa  92.8  3e-18  Thermobispora bispora DSM 43833  Bacteria  normal  0.347836  normal 
 
 
-
 
NC_013159  Svir_17340  CRISPR-associated protein, Cse2 family  44.74 
 
 
193 aa  92.4  4e-18  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_2574  CRISPR-associated Cse2 family protein  43.11 
 
 
226 aa  89  4e-17  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00326994 
 
 
-
 
NC_013131  Caci_3908  CRISPR-associated protein, Cse2 family  38.92 
 
 
223 aa  87.4  1e-16  Catenulispora acidiphila DSM 44928  Bacteria  hitchhiker  2.11783e-05  normal  0.232688 
 
 
-
 
NC_013510  Tcur_2681  CRISPR-associated protein, Cse2 family  35.39 
 
 
212 aa  83.6  2e-15  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.000660236  n/a   
 
 
-
 
NC_013235  Namu_3053  CRISPR-associated protein, Cse2 family  39.87 
 
 
215 aa  80.5  2e-14  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00308691  hitchhiker  0.00180541 
 
 
-
 
NC_007333  Tfu_1599  CRISPR-associated Cse2 family protein  36.88 
 
 
214 aa  79  5e-14  Thermobifida fusca YX  Bacteria  normal  0.0275986  n/a   
 
 
-
 
NC_013526  Tter_1897  CRISPR-associated protein, Cse2 family  28.3 
 
 
186 aa  57.8  1e-07  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_1282  CRISPR-associated protein, Cse2 family  37.97 
 
 
233 aa  54.7  9e-07  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013721  HMPREF0424_0761  CRISPR system CASCADE complex protein CasB  28.16 
 
 
204 aa  49.7  3e-05  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.0427302 
 
 
-
 
NC_008554  Sfum_2826  CRISPR-associated Cse2 family protein  31.61 
 
 
159 aa  48.9  5e-05  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_3759  CRISPR-associated Cse2 family protein  31.98 
 
 
180 aa  47.4  0.0001  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.428361 
 
 
-
 
NC_012560  Avin_17190  CRISPR-associated Cse2 family protein  29.68 
 
 
182 aa  45.1  0.0008  Azotobacter vinelandii DJ  Bacteria  normal  0.895123  n/a   
 
 
-
 
NC_011883  Ddes_0924  CRISPR-associated protein, Cse2 family  28.57 
 
 
183 aa  44.3  0.001  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
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