More than 300 homologs were found in PanDaTox collection
for query gene Fnod_0188 on replicon NC_009718
Organism: Fervidobacterium nodosum Rt17-B1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009718  Fnod_0188  extracellular solute-binding protein  100 
 
 
420 aa  862    Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_0322  extracellular solute-binding protein  69.93 
 
 
419 aa  627  1e-179  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_0340  extracellular solute-binding protein  69.45 
 
 
419 aa  615  1e-175  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_0270  extracellular solute-binding protein  68.74 
 
 
419 aa  609  1e-173  Thermosipho melanesiensis BI429  Bacteria  normal  0.562219  n/a   
 
 
-
 
NC_010003  Pmob_1068  extracellular solute-binding protein  42.48 
 
 
429 aa  336  3.9999999999999995e-91  Petrotoga mobilis SJ95  Bacteria  normal  0.501776  n/a   
 
 
-
 
NC_013205  Aaci_2049  extracellular solute-binding protein family 1  30.34 
 
 
438 aa  177  4e-43  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.266449  n/a   
 
 
-
 
NC_013171  Apre_0255  extracellular solute-binding protein family 1  31.12 
 
 
439 aa  166  5e-40  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_1392  extracellular solute-binding protein family 1  30.34 
 
 
445 aa  166  6.9999999999999995e-40  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_008530  LGAS_1638  ABC-type sugar transport system, periplasmic component  28.91 
 
 
434 aa  162  7e-39  Lactobacillus gasseri ATCC 33323  Bacteria  hitchhiker  0.0000325816  normal 
 
 
-
 
NC_014212  Mesil_0475  extracellular solute-binding protein family 1  27.56 
 
 
397 aa  149  6e-35  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_013205  Aaci_0075  extracellular solute-binding protein family 1  27.54 
 
 
441 aa  149  8e-35  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_2535  extracellular solute-binding protein family 1  28.25 
 
 
418 aa  148  2.0000000000000003e-34  Meiothermus ruber DSM 1279  Bacteria  normal  0.105932  normal 
 
 
-
 
NC_013946  Mrub_2730  extracellular solute-binding protein family 1  24.4 
 
 
399 aa  147  4.0000000000000006e-34  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_008530  LGAS_1846  ABC-type sugar transport system, periplasmic component  29 
 
 
442 aa  146  5e-34  Lactobacillus gasseri ATCC 33323  Bacteria  hitchhiker  0.00000328949  hitchhiker  0.000299807 
 
 
-
 
NC_013946  Mrub_0791  extracellular solute-binding protein family 1  26.04 
 
 
399 aa  144  3e-33  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.418273 
 
 
-
 
NC_013411  GYMC61_2845  extracellular solute-binding protein family 1  28.96 
 
 
439 aa  144  3e-33  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009616  Tmel_0753  extracellular solute-binding protein  26.94 
 
 
437 aa  144  4e-33  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_1696  extracellular solute-binding protein  25.91 
 
 
436 aa  144  4e-33  Thermotoga sp. RQ2  Bacteria  hitchhiker  0.00506774  n/a   
 
 
-
 
NC_014212  Mesil_2057  extracellular solute-binding protein family 1  28.43 
 
 
421 aa  144  4e-33  Meiothermus silvanus DSM 9946  Bacteria  normal  0.112802  normal  0.296802 
 
 
-
 
NC_014212  Mesil_0955  extracellular solute-binding protein family 1  27.5 
 
 
437 aa  143  5e-33  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.152307 
 
 
-
 
NC_013171  Apre_0061  extracellular solute-binding protein family 1  26.92 
 
 
462 aa  143  6e-33  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_0721  extracellular solute-binding protein  25.63 
 
 
437 aa  141  3e-32  Petrotoga mobilis SJ95  Bacteria  normal  0.540981  n/a   
 
 
-
 
NC_010003  Pmob_0289  extracellular solute-binding protein  25.8 
 
 
437 aa  140  4.999999999999999e-32  Petrotoga mobilis SJ95  Bacteria  unclonable  0.00000019091  n/a   
 
 
-
 
NC_012912  Dd1591_3386  extracellular solute-binding protein family 1  28.28 
 
 
440 aa  133  6.999999999999999e-30  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_3270  extracellular solute-binding protein family 1  29.6 
 
 
435 aa  133  7.999999999999999e-30  Dickeya dadantii Ech703  Bacteria  normal  0.543416  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0483  extracellular solute-binding protein  27.59 
 
 
458 aa  132  9e-30  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_0632  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein, putative  27.83 
 
 
458 aa  132  1.0000000000000001e-29  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0480  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  27.83 
 
 
458 aa  132  2.0000000000000002e-29  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0482  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  27.83 
 
 
458 aa  131  2.0000000000000002e-29  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0625  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  27.83 
 
 
458 aa  131  2.0000000000000002e-29  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_011725  BCB4264_A0606  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  27.83 
 
 
458 aa  131  2.0000000000000002e-29  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS0538  glycerol-3-phosphate ABC transporter glycerol-3-phosphate-binding protein  27.98 
 
 
458 aa  131  3e-29  Bacillus anthracis str. Sterne  Bacteria  normal  0.406699  n/a   
 
 
-
 
NC_007530  GBAA_0569  glycerol-3-phosphate ABC transporter glycerol-3-phosphate-binding protein  27.98 
 
 
458 aa  131  3e-29  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4733  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  27.59 
 
 
458 aa  129  1.0000000000000001e-28  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_0476  extracellular solute-binding protein family 1  24.69 
 
 
401 aa  127  4.0000000000000003e-28  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_011658  BCAH187_A0700  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  27.34 
 
 
458 aa  126  7e-28  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_0322  extracellular solute-binding protein family 1  25.79 
 
 
435 aa  125  1e-27  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_0631  extracellular solute-binding protein family 1  28.95 
 
 
435 aa  121  3e-26  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2294  extracellular solute-binding protein family 1  27.55 
 
 
448 aa  120  3.9999999999999996e-26  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_1484  extracellular solute-binding protein  30.52 
 
 
444 aa  120  6e-26  Moorella thermoacetica ATCC 39073  Bacteria  unclonable  0.00000000000980441  normal 
 
 
-
 
NC_009654  Mmwyl1_0604  extracellular solute-binding protein  24.89 
 
 
433 aa  119  9e-26  Marinomonas sp. MWYL1  Bacteria  normal  hitchhiker  0.00010036 
 
 
-
 
NC_011894  Mnod_6751  extracellular solute-binding protein family 1  25.55 
 
 
441 aa  119  9.999999999999999e-26  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_008043  TM1040_3216  extracellular solute-binding protein  26.54 
 
 
425 aa  119  9.999999999999999e-26  Ruegeria sp. TM1040  Bacteria  normal  normal  0.949389 
 
 
-
 
NC_007413  Ava_1229  extracellular solute-binding protein  25.35 
 
 
461 aa  117  3.9999999999999997e-25  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0257979  normal  0.868479 
 
 
-
 
NC_010511  M446_6664  extracellular solute-binding protein  25.43 
 
 
452 aa  116  6.9999999999999995e-25  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0689323 
 
 
-
 
NC_011884  Cyan7425_3276  extracellular solute-binding protein family 1  24.29 
 
 
420 aa  115  1.0000000000000001e-24  Cyanothece sp. PCC 7425  Bacteria  normal  0.147153  normal  0.336546 
 
 
-
 
NC_013131  Caci_2418  extracellular solute-binding protein family 1  26.55 
 
 
447 aa  114  2.0000000000000002e-24  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_0845  extracellular solute-binding protein family 1  27.43 
 
 
435 aa  114  3e-24  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_5306  extracellular solute-binding protein  24.39 
 
 
431 aa  112  1.0000000000000001e-23  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.457023 
 
 
-
 
NC_013739  Cwoe_5802  extracellular solute-binding protein family 1  24.5 
 
 
444 aa  112  1.0000000000000001e-23  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.0809589 
 
 
-
 
NC_011992  Dtpsy_2659  extracellular solute-binding protein family 1  24.81 
 
 
431 aa  110  3e-23  Acidovorax ebreus TPSY  Bacteria  decreased coverage  0.00136924  n/a   
 
 
-
 
NC_011899  Hore_20630  extracellular solute-binding protein family 1  25.94 
 
 
414 aa  110  6e-23  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_4133  extracellular solute-binding protein family 1  27.27 
 
 
426 aa  109  9.000000000000001e-23  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_0656  extracellular solute-binding protein family 1  25.06 
 
 
431 aa  108  1e-22  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.31335 
 
 
-
 
NC_007413  Ava_4289  extracellular solute-binding protein  24.55 
 
 
466 aa  108  2e-22  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_008751  Dvul_0224  extracellular solute-binding protein  25.29 
 
 
431 aa  107  3e-22  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_2791  extracellular solute-binding protein family 1  24.11 
 
 
402 aa  107  3e-22  Meiothermus ruber DSM 1279  Bacteria  normal  0.448693  normal 
 
 
-
 
NC_008782  Ajs_3306  extracellular solute-binding protein  24.56 
 
 
431 aa  107  4e-22  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_2738  extracellular solute-binding protein  24.72 
 
 
438 aa  106  6e-22  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.345118  n/a   
 
 
-
 
NC_013202  Hmuk_0332  extracellular solute-binding protein family 1  22.09 
 
 
468 aa  106  9e-22  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal 
 
 
-
 
NC_009832  Spro_0234  glycerol-3-phosphate transporter periplasmic binding protein  22.79 
 
 
439 aa  106  1e-21  Serratia proteamaculans 568  Bacteria  normal  normal  0.500336 
 
 
-
 
NC_009457  VC0395_A1155  glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein  24.37 
 
 
434 aa  105  1e-21  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_008044  TM1040_0849  extracellular solute-binding protein  22.49 
 
 
434 aa  105  2e-21  Ruegeria sp. TM1040  Bacteria  normal  0.0177782  normal 
 
 
-
 
NC_010465  YPK_3962  glycerol-3-phosphate transporter periplasmic binding protein  23.41 
 
 
439 aa  105  2e-21  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_0954  extracellular solute-binding protein  24.7 
 
 
399 aa  105  2e-21  Petrotoga mobilis SJ95  Bacteria  normal  0.0450213  n/a   
 
 
-
 
NC_013421  Pecwa_0117  glycerol-3-phosphate transporter periplasmic binding protein  25.05 
 
 
444 aa  105  2e-21  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_1017  extracellular solute-binding protein  25.29 
 
 
417 aa  105  2e-21  Thermosipho melanesiensis BI429  Bacteria  normal  0.0416471  n/a   
 
 
-
 
NC_009708  YpsIP31758_0256  glycerol-3-phosphate transporter periplasmic binding protein  23.41 
 
 
439 aa  105  2e-21  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1508  extracellular solute-binding protein family 1  27.9 
 
 
451 aa  104  3e-21  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.55774  normal 
 
 
-
 
NC_012791  Vapar_4001  extracellular solute-binding protein family 1  23.98 
 
 
442 aa  104  3e-21  Variovorax paradoxus S110  Bacteria  normal  0.131149  n/a   
 
 
-
 
NC_012917  PC1_0125  glycerol-3-phosphate transporter periplasmic binding protein  24.95 
 
 
444 aa  103  6e-21  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_3149  extracellular solute-binding protein  24.26 
 
 
427 aa  103  6e-21  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_010159  YpAngola_A3655  glycerol-3-phosphate transporter periplasmic binding protein  23.18 
 
 
439 aa  102  9e-21  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_012848  Rleg_5204  extracellular solute-binding protein family 1  26.68 
 
 
440 aa  102  1e-20  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.306263 
 
 
-
 
NC_011988  Avi_5507  ABC transporter substrate binding protein (glycerol 3-phosphate)  23.8 
 
 
447 aa  101  2e-20  Agrobacterium vitis S4  Bacteria  normal  0.0724145  n/a   
 
 
-
 
NC_007802  Jann_2075  extracellular solute-binding protein  21.63 
 
 
433 aa  98.6  2e-19  Jannaschia sp. CCS1  Bacteria  normal  0.114781  normal  0.235936 
 
 
-
 
NC_009939  Dgeo_2919  ABC-type sugar transport system, periplasmic component  22.51 
 
 
407 aa  99  2e-19  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_009436  Ent638_3856  glycerol-3-phosphate transporter periplasmic binding protein  21.83 
 
 
440 aa  98.2  3e-19  Enterobacter sp. 638  Bacteria  normal  normal  0.64819 
 
 
-
 
NC_006369  lpl2199  hypothetical protein  24.76 
 
 
437 aa  96.3  8e-19  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_014213  Mesil_3226  Transcriptional regulator  21.63 
 
 
410 aa  96.7  8e-19  Meiothermus silvanus DSM 9946  Bacteria  normal  0.101031  normal 
 
 
-
 
NC_014213  Mesil_3422  ABC-type sugar transport systems permease component  21.63 
 
 
410 aa  96.7  8e-19  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_4045  glycerol-3-phosphate transporter periplasmic binding protein  22.43 
 
 
439 aa  96.3  8e-19  Dickeya zeae Ech1591  Bacteria  normal  0.661181  n/a   
 
 
-
 
NC_012880  Dd703_3861  glycerol-3-phosphate transporter periplasmic binding protein  24.01 
 
 
439 aa  95.9  1e-18  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_006368  lpp2227  hypothetical protein  24.82 
 
 
437 aa  95.9  1e-18  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_013739  Cwoe_4883  extracellular solute-binding protein family 1  24.32 
 
 
436 aa  95.9  1e-18  Conexibacter woesei DSM 14684  Bacteria  normal  0.504344  normal 
 
 
-
 
NC_013205  Aaci_0770  extracellular solute-binding protein family 1  25.6 
 
 
444 aa  94  4e-18  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_2799  extracellular solute-binding protein  24.2 
 
 
453 aa  93.6  7e-18  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.357786  n/a   
 
 
-
 
NC_013172  Bfae_30840  ABC-type sugar transport system, periplasmic component  24.68 
 
 
463 aa  92.8  1e-17  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_0374  glycerol-3-phosphate transporter periplasmic binding protein  23.23 
 
 
444 aa  91.7  2e-17  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_18880  carbohydrate-binding protein  22.38 
 
 
460 aa  92  2e-17  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.141989  normal  0.173455 
 
 
-
 
NC_008060  Bcen_2712  glycerol-3-phosphate transporter periplasmic binding protein  23.56 
 
 
443 aa  91.7  2e-17  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.290307  n/a   
 
 
-
 
NC_008542  Bcen2424_0395  glycerol-3-phosphate transporter periplasmic binding protein  23.56 
 
 
443 aa  91.7  2e-17  Burkholderia cenocepacia HI2424  Bacteria  normal  0.954301  n/a   
 
 
-
 
NC_011080  SNSL254_A3826  glycerol-3-phosphate transporter periplasmic binding protein  22.75 
 
 
438 aa  91.3  3e-17  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B3759  glycerol-3-phosphate transporter periplasmic binding protein  22.75 
 
 
438 aa  91.3  3e-17  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011083  SeHA_C3869  glycerol-3-phosphate transporter periplasmic binding protein  22.75 
 
 
438 aa  91.3  3e-17  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_011071  Smal_2683  extracellular solute-binding protein family 1  24.04 
 
 
446 aa  90.9  4e-17  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.50155  normal 
 
 
-
 
NC_008709  Ping_2093  glycerol-3-phosphate ABC transporter extracellular solute-binding family 1 protein  25.06 
 
 
435 aa  90.5  4e-17  Psychromonas ingrahamii 37  Bacteria  normal  0.107678  normal  0.487826 
 
 
-
 
NC_011205  SeD_A3928  glycerol-3-phosphate transporter periplasmic binding protein  22.75 
 
 
438 aa  90.9  4e-17  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_3650  extracellular solute-binding protein  23.97 
 
 
436 aa  90.5  5e-17  Acidovorax citrulli AAC00-1  Bacteria  normal  0.144474  normal 
 
 
-
 
NC_007958  RPD_4373  extracellular solute-binding protein  23.3 
 
 
437 aa  89.7  8e-17  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.104197  normal 
 
 
-
 
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