More than 300 homologs were found in PanDaTox collection
for query gene EcolC_2423 on replicon NC_010468
Organism: Escherichia coli ATCC 8739



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
CP001509  ECD_01178  translation-associated GTPase  99.72 
 
 
363 aa  739  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
NC_011080  SNSL254_A1917  GTP-dependent nucleic acid-binding protein EngD  95.04 
 
 
363 aa  712  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.188872  normal 
 
 
-
 
NC_012912  Dd1591_2063  GTP-dependent nucleic acid-binding protein EngD  95.59 
 
 
363 aa  719  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_011083  SeHA_C1981  GTP-dependent nucleic acid-binding protein EngD  95.04 
 
 
363 aa  712  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.262835  normal 
 
 
-
 
NC_011094  SeSA_A1923  GTP-dependent nucleic acid-binding protein EngD  95.04 
 
 
363 aa  712  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_2414  GTP-dependent nucleic acid-binding protein EngD  92.56 
 
 
363 aa  679  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_2121  GTP-dependent nucleic acid-binding protein EngD  93.11 
 
 
363 aa  682  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.0490059  n/a   
 
 
-
 
NC_011149  SeAg_B1353  GTP-dependent nucleic acid-binding protein EngD  95.04 
 
 
363 aa  712  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.0280261  n/a   
 
 
-
 
NC_011205  SeD_A1537  GTP-dependent nucleic acid-binding protein EngD  95.04 
 
 
363 aa  712  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal  0.0518912 
 
 
-
 
NC_011353  ECH74115_1684  GTP-dependent nucleic acid-binding protein EngD  100 
 
 
363 aa  742  Escherichia coli O157:H7 str. EC4115  Bacteria  hitchhiker  0.000467912  normal  0.464774 
 
 
-
 
NC_012880  Dd703_1849  GTP-dependent nucleic acid-binding protein EngD  93.11 
 
 
363 aa  701  Dickeya dadantii Ech703  Bacteria  normal  0.476561  n/a   
 
 
-
 
NC_012892  B21_01188  hypothetical protein  99.72 
 
 
363 aa  739  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_1939  GTP-dependent nucleic acid-binding protein EngD  100 
 
 
363 aa  742  Escherichia coli SMS-3-5  Bacteria  normal  0.256808  normal  0.0918473 
 
 
-
 
NC_010658  SbBS512_E1367  GTP-dependent nucleic acid-binding protein EngD  100 
 
 
363 aa  742  Shigella boydii CDC 3083-94  Bacteria  normal  0.37474  n/a   
 
 
-
 
NC_009800  EcHS_A1308  GTP-dependent nucleic acid-binding protein EngD  100 
 
 
363 aa  742  Escherichia coli HS  Bacteria  normal  0.253077  n/a   
 
 
-
 
NC_010159  YpAngola_A2468  GTP-dependent nucleic acid-binding protein EngD  92.29 
 
 
363 aa  677  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_010465  YPK_2187  GTP-dependent nucleic acid-binding protein EngD  92.56 
 
 
363 aa  679  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_2423  GTP-dependent nucleic acid-binding protein EngD  100 
 
 
363 aa  742  Escherichia coli ATCC 8739  Bacteria  normal  normal  0.0847638 
 
 
-
 
NC_009708  YpsIP31758_2075  GTP-dependent nucleic acid-binding protein EngD  92.56 
 
 
363 aa  679  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.0577109  n/a   
 
 
-
 
NC_009832  Spro_1982  GTP-dependent nucleic acid-binding protein EngD  93.94 
 
 
363 aa  685  Serratia proteamaculans 568  Bacteria  normal  normal  0.0132051 
 
 
-
 
CP001637  EcDH1_2444  GTP-binding protein YchF  100 
 
 
363 aa  742  Escherichia coli DH1  Bacteria  normal  0.0781916  n/a   
 
 
-
 
NC_009436  Ent638_2345  GTP-dependent nucleic acid-binding protein EngD  92.84 
 
 
363 aa  679  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_009801  EcE24377A_1350  GTP-dependent nucleic acid-binding protein EngD  100 
 
 
363 aa  742  Escherichia coli E24377A  Bacteria  normal  0.0630481  n/a   
 
 
-
 
NC_008309  HS_0503  GTP-dependent nucleic acid-binding protein EngD  81.54 
 
 
363 aa  624  1e-178  Haemophilus somnus 129PT  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_2571  GTP-dependent nucleic acid-binding protein EngD  81.27 
 
 
363 aa  615  1e-175  Shewanella amazonensis SB2B  Bacteria  hitchhiker  6.9275e-07  normal  0.128339 
 
 
-
 
NC_009438  Sputcn32_2852  GTP-dependent nucleic acid-binding protein EngD  80.72 
 
 
363 aa  609  1e-173  Shewanella putrefaciens CN-32  Bacteria  hitchhiker  9.59871e-08  n/a   
 
 
-
 
NC_004347  SO_1185  GTP-dependent nucleic acid-binding protein EngD  79.34 
 
 
363 aa  602  1e-171  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009783  VIBHAR_01244  GTP-dependent nucleic acid-binding protein EngD  79.06 
 
 
363 aa  597  1e-170  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009665  Shew185_3299  GTP-dependent nucleic acid-binding protein EngD  78.79 
 
 
363 aa  600  1e-170  Shewanella baltica OS185  Bacteria  unclonable  4.59769e-11  n/a   
 
 
-
 
NC_008322  Shewmr7_1073  GTP-dependent nucleic acid-binding protein EngD  79.06 
 
 
363 aa  599  1e-170  Shewanella sp. MR-7  Bacteria  unclonable  5.96539e-06  normal  0.137935 
 
 
-
 
NC_008321  Shewmr4_1008  GTP-dependent nucleic acid-binding protein EngD  79.06 
 
 
363 aa  599  1e-170  Shewanella sp. MR-4  Bacteria  hitchhiker  2.08433e-07  normal  0.179939 
 
 
-
 
NC_008577  Shewana3_1012  GTP-dependent nucleic acid-binding protein EngD  79.06 
 
 
363 aa  599  1e-170  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.00042531  normal  0.0638456 
 
 
-
 
NC_011663  Sbal223_1110  GTP-dependent nucleic acid-binding protein EngD  78.79 
 
 
363 aa  600  1e-170  Shewanella baltica OS223  Bacteria  hitchhiker  1.14321e-07  hitchhiker  1.31179e-09 
 
 
-
 
NC_009997  Sbal195_3435  GTP-dependent nucleic acid-binding protein EngD  78.79 
 
 
363 aa  600  1e-170  Shewanella baltica OS195  Bacteria  unclonable  3.60155e-07  hitchhiker  0.00065537 
 
 
-
 
NC_009092  Shew_2919  GTP-dependent nucleic acid-binding protein EngD  80.17 
 
 
363 aa  595  1e-169  Shewanella loihica PV-4  Bacteria  unclonable  2.56677e-07  normal  0.0926054 
 
 
-
 
NC_011138  MADE_02583  GTP-dependent nucleic acid-binding protein EngD  77.13 
 
 
363 aa  595  1e-169  Alteromonas macleodii 'Deep ecotype'  Bacteria  hitchhiker  8.98424e-05  n/a   
 
 
-
 
NC_009052  Sbal_3257  GTP-dependent nucleic acid-binding protein EngD  78.51 
 
 
363 aa  597  1e-169  Shewanella baltica OS155  Bacteria  hitchhiker  7.20126e-08  n/a   
 
 
-
 
NC_008345  Sfri_0717  GTP-dependent nucleic acid-binding protein EngD  77.41 
 
 
363 aa  590  1e-167  Shewanella frigidimarina NCIMB 400  Bacteria  decreased coverage  0.000164209  n/a   
 
 
-
 
NC_013456  VEA_004209  GTP-binding and nucleic acid-binding protein YchF  79.34 
 
 
363 aa  585  1e-166  Vibrio sp. Ex25  Bacteria  unclonable  2.09033e-07  n/a   
 
 
-
 
NC_010506  Swoo_3692  GTP-dependent nucleic acid-binding protein EngD  79.06 
 
 
363 aa  586  1e-166  Shewanella woodyi ATCC 51908  Bacteria  hitchhiker  4.68142e-06  normal  0.149729 
 
 
-
 
NC_009831  Ssed_3467  GTP-dependent nucleic acid-binding protein EngD  78.24 
 
 
363 aa  584  1e-166  Shewanella sediminis HAW-EB3  Bacteria  unclonable  1.06228e-07  normal  0.317822 
 
 
-
 
NC_003910  CPS_3560  GTP-dependent nucleic acid-binding protein EngD  76.86 
 
 
363 aa  585  1e-166  Colwellia psychrerythraea 34H  Bacteria  normal  0.0853075  n/a   
 
 
-
 
NC_011312  VSAL_I0784  GTP-dependent nucleic acid-binding protein EngD  76.86 
 
 
363 aa  585  1e-166  Aliivibrio salmonicida LFI1238  Bacteria  unclonable  0.000100332  n/a   
 
 
-
 
NC_007954  Sden_0819  GTP-dependent nucleic acid-binding protein EngD  78.79 
 
 
363 aa  585  1e-166  Shewanella denitrificans OS217  Bacteria  hitchhiker  6.42371e-07  n/a   
 
 
-
 
NC_008228  Patl_2571  GTP-dependent nucleic acid-binding protein EngD  76.03 
 
 
363 aa  582  1e-165  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_3133  GTP-dependent nucleic acid-binding protein EngD  77.41 
 
 
363 aa  573  1e-162  Shewanella pealeana ATCC 700345  Bacteria  hitchhiker  5.05872e-08  n/a   
 
 
-
 
NC_008709  Ping_0908  GTP-binding protein YchF  75.21 
 
 
363 aa  558  1e-158  Psychromonas ingrahamii 37  Bacteria  normal  normal  0.390538 
 
 
-
 
NC_009457  VC0395_A1762  GTP-dependent nucleic acid-binding protein EngD  77.69 
 
 
363 aa  557  1e-158  Vibrio cholerae O395  Bacteria  unclonable  6.06508e-14  n/a   
 
 
-
 
NC_008740  Maqu_2368  GTP-dependent nucleic acid-binding protein EngD  73.55 
 
 
363 aa  559  1e-158  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_013422  Hneap_1171  GTP-binding protein YchF  74.18 
 
 
364 aa  551  1e-156  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_1521  GTP-dependent nucleic acid-binding protein EngD  71.35 
 
 
363 aa  548  1e-155  Chromohalobacter salexigens DSM 3043  Bacteria  hitchhiker  0.00078802  n/a   
 
 
-
 
NC_009656  PSPA7_5323  GTP-dependent nucleic acid-binding protein EngD  72.13 
 
 
366 aa  545  1e-154  Pseudomonas aeruginosa PA7  Bacteria  normal  0.207284  n/a   
 
 
-
 
NC_008463  PA14_61820  GTP-dependent nucleic acid-binding protein EngD  72.13 
 
 
366 aa  544  1e-154  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  hitchhiker  4.90412e-05  hitchhiker  0.00796401 
 
 
-
 
NC_007973  Rmet_3193  GTP-dependent nucleic acid-binding protein EngD  73 
 
 
363 aa  545  1e-154  Cupriavidus metallidurans CH34  Bacteria  normal  0.36162  normal 
 
 
-
 
NC_007492  Pfl01_4756  GTP-dependent nucleic acid-binding protein EngD  71.31 
 
 
366 aa  541  1e-153  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.586629  normal  0.439463 
 
 
-
 
NC_009512  Pput_0753  GTP-dependent nucleic acid-binding protein EngD  71.86 
 
 
366 aa  542  1e-153  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_4464  GTP-dependent nucleic acid-binding protein EngD  71.31 
 
 
366 aa  538  1e-152  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_3733  GTP-dependent nucleic acid-binding protein EngD  71.35 
 
 
363 aa  539  1e-152  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.316822 
 
 
-
 
NC_002947  PP_0719  GTP-dependent nucleic acid-binding protein EngD  71.31 
 
 
366 aa  538  1e-152  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_3607  GTP-dependent nucleic acid-binding protein EngD  71.63 
 
 
363 aa  538  1e-152  Marinomonas sp. MWYL1  Bacteria  hitchhiker  0.000140673  normal  0.0364167 
 
 
-
 
NC_009439  Pmen_1052  GTP-dependent nucleic acid-binding protein EngD  70.49 
 
 
366 aa  537  1e-152  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.133345 
 
 
-
 
NC_010322  PputGB1_0763  GTP-dependent nucleic acid-binding protein EngD  71.04 
 
 
366 aa  537  1e-152  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_41550  GTP-dependent nucleic acid-binding protein EngD  70.77 
 
 
366 aa  541  1e-152  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_008390  Bamb_0429  GTP-dependent nucleic acid-binding protein EngD  70.88 
 
 
364 aa  536  1e-151  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_008060  Bcen_2581  GTP-dependent nucleic acid-binding protein EngD  70.6 
 
 
364 aa  534  1e-151  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_0496  GTP-dependent nucleic acid-binding protein EngD  70.6 
 
 
364 aa  534  1e-151  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008542  Bcen2424_0524  GTP-dependent nucleic acid-binding protein EngD  70.6 
 
 
364 aa  534  1e-151  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_0453  GTP-dependent nucleic acid-binding protein EngD  70.88 
 
 
364 aa  536  1e-151  Burkholderia ambifaria MC40-6  Bacteria  normal  0.660955  normal  0.0338644 
 
 
-
 
NC_007347  Reut_A3037  GTP-dependent nucleic acid-binding protein EngD  71.9 
 
 
387 aa  537  1e-151  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_3507  GTP-dependent nucleic acid-binding protein EngD  71.7 
 
 
364 aa  536  1e-151  Burkholderia phytofirmans PsJN  Bacteria  normal  0.125034  normal  0.0137315 
 
 
-
 
NC_007651  BTH_I2920  GTP-dependent nucleic acid-binding protein EngD  70.88 
 
 
364 aa  535  1e-151  Burkholderia thailandensis E264  Bacteria  normal  0.657058  n/a   
 
 
-
 
NC_007951  Bxe_A0450  GTP-dependent nucleic acid-binding protein EngD  71.98 
 
 
364 aa  536  1e-151  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007912  Sde_3259  GTP-dependent nucleic acid-binding protein EngD  73.83 
 
 
363 aa  536  1e-151  Saccharophagus degradans 2-40  Bacteria  normal  hitchhiker  0.00267729 
 
 
-
 
NC_008784  BMASAVP1_0657  GTP-dependent nucleic acid-binding protein EngD  70.33 
 
 
364 aa  533  1e-150  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc2898  GTP-dependent nucleic acid-binding protein EngD  70.6 
 
 
364 aa  531  1e-150  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_006349  BMAA0519  GTP-dependent nucleic acid-binding protein EngD  70.33 
 
 
364 aa  533  1e-150  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A1923  GTP-dependent nucleic acid-binding protein EngD  70.33 
 
 
364 aa  533  1e-150  Burkholderia mallei NCTC 10247  Bacteria  normal  0.264442  n/a   
 
 
-
 
NC_009074  BURPS668_3569  GTP-dependent nucleic acid-binding protein EngD  70.6 
 
 
364 aa  533  1e-150  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_3596  GTP-dependent nucleic acid-binding protein EngD  70.33 
 
 
364 aa  533  1e-150  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_0952  GTP-dependent nucleic acid-binding protein EngD  70.33 
 
 
364 aa  533  1e-150  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_3587  GTP-dependent nucleic acid-binding protein EngD  70.6 
 
 
364 aa  533  1e-150  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0941  GTP-dependent nucleic acid-binding protein EngD  69.67 
 
 
366 aa  529  1e-149  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.510815 
 
 
-
 
NC_010682  Rpic_3140  GTP-dependent nucleic acid-binding protein EngD  70.88 
 
 
364 aa  529  1e-149  Ralstonia pickettii 12J  Bacteria  normal  0.48249  normal  0.369877 
 
 
-
 
NC_010084  Bmul_2871  GTP-dependent nucleic acid-binding protein EngD  70.05 
 
 
364 aa  530  1e-149  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.103234  normal  0.491395 
 
 
-
 
NC_004578  PSPTO_1101  GTP-binding protein YchF  69.67 
 
 
366 aa  529  1e-149  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A3611  GTP-dependent nucleic acid-binding protein EngD  69.78 
 
 
364 aa  531  1e-149  Burkholderia sp. 383  Bacteria  normal  normal  0.850292 
 
 
-
 
NC_007484  Noc_0517  GTP-dependent nucleic acid-binding protein EngD  69.7 
 
 
362 aa  528  1e-149  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_2708  GTP-dependent nucleic acid-binding protein EngD  71.15 
 
 
364 aa  530  1e-149  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007204  Psyc_0894  GTP-dependent nucleic acid-binding protein EngD  68.04 
 
 
363 aa  525  1e-148  Psychrobacter arcticus 273-4  Bacteria  normal  normal  0.943704 
 
 
-
 
NC_012856  Rpic12D_2774  GTP-dependent nucleic acid-binding protein EngD  70.52 
 
 
363 aa  526  1e-148  Ralstonia pickettii 12D  Bacteria  normal  normal  0.97205 
 
 
-
 
NC_011662  Tmz1t_3631  GTP-dependent nucleic acid-binding protein EngD  71.07 
 
 
363 aa  526  1e-148  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_007969  Pcryo_1524  GTP-dependent nucleic acid-binding protein EngD  67.77 
 
 
363 aa  521  1e-147  Psychrobacter cryohalolentis K5  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_0530  GTP-dependent nucleic acid-binding protein EngD  68.32 
 
 
363 aa  521  1e-147  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_4635  GTP-dependent nucleic acid-binding protein EngD  67.4 
 
 
363 aa  522  1e-147  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_009379  Pnuc_0142  GTP-binding protein YchF  69.23 
 
 
364 aa  519  1e-146  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  0.400282  n/a   
 
 
-
 
NC_010717  PXO_04539  GTP-dependent nucleic acid-binding protein EngD  68.6 
 
 
363 aa  518  1e-146  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.910533  n/a   
 
 
-
 
NC_011071  Smal_0729  GTP-dependent nucleic acid-binding protein EngD  68.04 
 
 
363 aa  516  1e-145  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.195825 
 
 
-
 
NC_010524  Lcho_0271  GTP-binding protein YchF  67.31 
 
 
364 aa  515  1e-145  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.198016 
 
 
-
 
NC_006368  lpp2707  GTP-dependent nucleic acid-binding protein EngD  67.49 
 
 
363 aa  514  1e-145  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_006369  lpl2579  GTP-dependent nucleic acid-binding protein EngD  67.77 
 
 
363 aa  517  1e-145  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
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