13 homologs were found in PanDaTox collection
for query gene EcolC_0047 on replicon NC_010468
Organism: Escherichia coli ATCC 8739



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010468  EcolC_0047  putative bacteriophage protein  100 
 
 
196 aa  399  1e-110  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_010468  EcolC_1057  putative bacteriophage protein  100 
 
 
196 aa  399  1e-110  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_010498  EcSMS35_4007  phage protein  99.25 
 
 
134 aa  270  8e-72  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_3107  putative CI repressor  57.95 
 
 
183 aa  198  4e-50  Enterobacter sp. 638  Bacteria  normal  0.505611  normal  0.201687 
 
 
-
 
NC_011353  ECH74115_0317  protein ash  65.14 
 
 
110 aa  139  3e-32  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal  0.387224 
 
 
-
 
NC_011080  SNSL254_A2961  phage immunity repressor protein  85.25 
 
 
64 aa  106  3e-22  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.576414  hitchhiker  2.87502e-06 
 
 
-
 
NC_011083  SeHA_C2645  phage immunity repressor protein  47.66 
 
 
131 aa  105  5e-22  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  hitchhiker  1.08991e-11 
 
 
-
 
NC_011080  SNSL254_A4844  phage immunity repressor protein  72.58 
 
 
63 aa  90.1  2e-17  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal  0.369525 
 
 
-
 
NC_010658  SbBS512_E4078  hypothetical protein  38.69 
 
 
262 aa  75.1  7e-13  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_1419  Rha family phage regulatory protein  28.8 
 
 
284 aa  50.8  1e-05  Escherichia coli E24377A  Bacteria  unclonable  1.00347e-12  n/a   
 
 
-
 
NC_011094  SeSA_A0377  phage immunity repressor protein  54.35 
 
 
58 aa  50.8  1e-05  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.114796  normal  0.345309 
 
 
-
 
NC_011149  SeAg_B4779  phage immunity repressor protein  54.35 
 
 
58 aa  50.8  1e-05  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_3883  hypothetical protein  43.64 
 
 
243 aa  45.1  0.0007  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
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