9 homologs were found in PanDaTox collection
for query gene EcE24377A_1985 on replicon NC_009801
Organism: Escherichia coli E24377A



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
CP001509  ECD_01731  predicted inner membrane protein  98.27 
 
 
346 aa  709    Escherichia coli BL21(DE3)  Bacteria  decreased coverage  0.000484302  n/a   
 
 
-
 
CP001637  EcDH1_1880  conserved hypothetical protein  98.27 
 
 
346 aa  709    Escherichia coli DH1  Bacteria  hitchhiker  0.00182412  n/a   
 
 
-
 
NC_009800  EcHS_A1846  hypothetical protein  98.27 
 
 
346 aa  709    Escherichia coli HS  Bacteria  hitchhiker  0.000163018  n/a   
 
 
-
 
NC_009801  EcE24377A_1985  hypothetical protein  100 
 
 
346 aa  724    Escherichia coli E24377A  Bacteria  decreased coverage  0.00000208242  n/a   
 
 
-
 
NC_010468  EcolC_1870  hypothetical protein  98.27 
 
 
346 aa  709    Escherichia coli ATCC 8739  Bacteria  hitchhiker  0.00999711  hitchhiker  0.000115044 
 
 
-
 
NC_011353  ECH74115_2482  hypothetical protein  97.98 
 
 
346 aa  708    Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.0976568  normal  0.614179 
 
 
-
 
NC_012892  B21_01719  hypothetical protein  98.27 
 
 
346 aa  709    Escherichia coli BL21  Bacteria  decreased coverage  0.000724895  n/a   
 
 
-
 
NC_010658  SbBS512_E2015  putative IS1 encoded protein  98.04 
 
 
108 aa  114  2.0000000000000002e-24  Shigella boydii CDC 3083-94  Bacteria  normal  0.235894  n/a   
 
 
-
 
NC_013440  Hoch_2063  hypothetical protein  26.33 
 
 
357 aa  99.4  8e-20  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
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