30 homologs were found in PanDaTox collection
for query gene ECH74115_2728 on replicon NC_011353
Organism: Escherichia coli O157:H7 str. EC4115



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
CP001637  EcDH1_1697  transcriptional regulator, LuxR family  100 
 
 
207 aa  425  1e-118  Escherichia coli DH1  Bacteria  hitchhiker  1.15016e-10  n/a   
 
 
-
 
NC_011353  ECH74115_2728  colanic acid capsular biosynthesis activation protein A  100 
 
 
207 aa  425  1e-118  Escherichia coli O157:H7 str. EC4115  Bacteria  unclonable  8.30515e-09  normal  0.480733 
 
 
-
 
NC_009800  EcHS_A2051  colanic acid capsular biosynthesis activation protein A  98.55 
 
 
207 aa  418  1e-116  Escherichia coli HS  Bacteria  decreased coverage  4.74459e-16  n/a   
 
 
-
 
NC_010468  EcolC_1691  LuxR family transcriptional regulator  98.55 
 
 
207 aa  417  1e-116  Escherichia coli ATCC 8739  Bacteria  decreased coverage  2.65916e-07  hitchhiker  0.00232643 
 
 
-
 
NC_010498  EcSMS35_1233  colanic acid capsular biosynthesis activation protein A  99.03 
 
 
207 aa  419  1e-116  Escherichia coli SMS-3-5  Bacteria  hitchhiker  1.32181e-08  normal 
 
 
-
 
NC_009801  EcE24377A_2184  colanic acid capsular biosynthesis activation protein A  99.03 
 
 
207 aa  419  1e-116  Escherichia coli E24377A  Bacteria  hitchhiker  9.16169e-12  n/a   
 
 
-
 
NC_010658  SbBS512_E1072  colanic acid capsular biosynthesis activation protein A  96.53 
 
 
203 aa  394  1e-109  Shigella boydii CDC 3083-94  Bacteria  hitchhiker  3.07954e-10  n/a   
 
 
-
 
NC_011080  SNSL254_A2145  colanic acid capsular biosynthesis activation protein A  87.92 
 
 
207 aa  378  1e-104  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  decreased coverage  0.000312117  hitchhiker  0.00586911 
 
 
-
 
NC_011083  SeHA_C2199  colanic acid capsular biosynthesis activation protein A  87.92 
 
 
207 aa  378  1e-104  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.283228  normal  0.62751 
 
 
-
 
NC_011094  SeSA_A2141  colanic acid capsular biosynthesis activation protein A  87.92 
 
 
207 aa  378  1e-104  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  hitchhiker  0.000944438  normal  0.224442 
 
 
-
 
NC_011149  SeAg_B1137  colanic acid capsular biosynthesis activation protein A  88.41 
 
 
207 aa  379  1e-104  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  hitchhiker  1.92642e-09  n/a   
 
 
-
 
NC_011205  SeD_A1259  colanic acid capsular biosynthesis activation protein A  87.92 
 
 
207 aa  378  1e-104  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.0272351  normal  0.751941 
 
 
-
 
NC_009436  Ent638_2542  response regulator receiver protein  85.99 
 
 
207 aa  372  1e-102  Enterobacter sp. 638  Bacteria  decreased coverage  5.37034e-05  normal 
 
 
-
 
NC_009832  Spro_3050  LuxR family transcriptional regulator  68.1 
 
 
209 aa  293  1e-78  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_0336  two component LuxR family transcriptional regulator  25.56 
 
 
199 aa  66.2  3e-10  Enterobacter sp. 638  Bacteria  normal  unclonable  2.45981e-06 
 
 
-
 
NC_009708  YpsIP31758_1563  LuxR family transcriptional regulator  23.24 
 
 
194 aa  53.1  3e-06  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.241768  n/a   
 
 
-
 
NC_010465  YPK_1671  LuxR family transcriptional regulator  23.24 
 
 
194 aa  53.1  3e-06  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A1707  LuxR family transcriptional regulator  23.62 
 
 
204 aa  51.2  1e-05  Yersinia pestis Angola  Bacteria  normal  0.0182424  hitchhiker  0.000162083 
 
 
-
 
NC_009832  Spro_1891  LuxR family transcriptional regulator  17.99 
 
 
208 aa  48.5  7e-05  Serratia proteamaculans 568  Bacteria  normal  hitchhiker  0.000479557 
 
 
-
 
NC_013165  Shel_16610  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  38.46 
 
 
491 aa  44.3  0.001  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.0119595  normal  0.714327 
 
 
-
 
NC_007498  Pcar_0664  putative response regulator protein  31.03 
 
 
508 aa  43.9  0.002  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_4296  two component LuxR family transcriptional regulator  37.5 
 
 
214 aa  43.5  0.002  Polaromonas sp. JS666  Bacteria  normal  0.891496  normal 
 
 
-
 
NC_013132  Cpin_3979  two component transcriptional regulator, LuxR family  35 
 
 
220 aa  42.7  0.004  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.487116  normal  0.704163 
 
 
-
 
NC_006349  BMAA1518.1  DNA-binding response regulator  23.76 
 
 
223 aa  42.7  0.004  Burkholderia mallei ATCC 23344  Bacteria  hitchhiker  0.000399536  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0560  DNA-binding response regulator  23.76 
 
 
223 aa  42.7  0.004  Burkholderia pseudomallei 1710b  Bacteria  normal  0.0224831  n/a   
 
 
-
 
NC_009078  BURPS1106A_A2062  LuxR family DNA-binding response regulator  23.76 
 
 
214 aa  42.7  0.004  Burkholderia pseudomallei 1106a  Bacteria  normal  0.0947149  n/a   
 
 
-
 
NC_009079  BMA10247_A0766  DNA-binding response regulator  23.76 
 
 
214 aa  42.7  0.004  Burkholderia mallei NCTC 10247  Bacteria  normal  0.261512  n/a   
 
 
-
 
NC_009075  BURPS668_A2151  DNA-binding response regulator  23.76 
 
 
214 aa  42.7  0.004  Burkholderia pseudomallei 668  Bacteria  normal  0.639034  n/a   
 
 
-
 
NC_008835  BMA10229_2085  DNA-binding response regulator  23.76 
 
 
264 aa  42.4  0.005  Burkholderia mallei NCTC 10229  Bacteria  normal  0.844485  n/a   
 
 
-
 
NC_010682  Rpic_3357  two component transcriptional regulator, LuxR family  21.17 
 
 
222 aa  42  0.006  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
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