More than 300 homologs were found in PanDaTox collection
for query gene Dvul_1364 on replicon NC_008751
Organism: Desulfovibrio vulgaris DP4



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008751  Dvul_1364  histone family protein DNA-binding protein  100 
 
 		 90 aa  177  5.999999999999999e-44  Desulfovibrio vulgaris DP4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011769  DvMF_0500  histone family protein DNA-binding protein  93.33 
 
 		 90 aa  167  4e-41  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    hitchhiker  0.000759527 
 
 
-
 
NC_007519  Dde_2058  histone-like DNA-binding protein  82.22 
 
 		 90 aa  149  1e-35  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.954956  n/a   
 
 
-
 
NC_011883  Ddes_1090  histone family protein DNA-binding protein  73.03 
 
 		 90 aa  135  1e-31  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  1  n/a   
 
 
-
 
NC_013223  Dret_1900  histone family protein DNA-binding protein  72.22 
 
 		 90 aa  135  1e-31  Desulfohalobium retbaense DSM 5692  Bacteria  normal  1  normal  0.0802524 
 
 
-
 
NC_013173  Dbac_2463  histone family protein DNA-binding protein  71.11 
 
 		 90 aa  130  3.9999999999999996e-30  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0228112  n/a   
 
 
-
 
NC_008554  Sfum_2107  histone family protein DNA-binding protein  62.22 
 
 		 90 aa  115  9.999999999999999e-26  Syntrophobacter fumaroxidans MPOB  Bacteria  decreased coverage  0.00000844989  hitchhiker  0.00906741 
 
 
-
 
NC_007517  Gmet_0355  histone-like DNA-binding protein  60.67 
 
 		 94 aa  108  3e-23  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.00204011  normal  0.390975 
 
 
-
 
NC_002939  GSU3132  DNA-binding protein HU  60.67 
 
 		 94 aa  107  4.0000000000000004e-23  Geobacter sulfurreducens PCA  Bacteria  normal  0.246817  n/a   
 
 
-
 
NC_011883  Ddes_0087  histone family protein DNA-binding protein  62.64 
 
 		 91 aa  106  8.000000000000001e-23  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  1  n/a   
 
 
-
 
NC_012856  Rpic12D_1533  histone family protein DNA-binding protein  53.93 
 
 		 90 aa  106  1e-22  Ralstonia pickettii 12D  Bacteria  normal  0.753498  normal  0.353479 
 
 
-
 
NC_003295  RSc1714  DNA-binding protein HU-beta  53.93 
 
 		 90 aa  105  2e-22  Ralstonia solanacearum GMI1000  Bacteria  normal  0.606946  normal  0.0324854 
 
 
-
 
NC_010681  Bphyt_1909  histone family protein DNA-binding protein  58.43 
 
 		 90 aa  105  2e-22  Burkholderia phytofirmans PsJN  Bacteria  normal  0.715849  normal  1 
 
 
-
 
NC_008751  Dvul_2207  histone family protein DNA-binding protein  62.64 
 
 		 91 aa  105  2e-22  Desulfovibrio vulgaris DP4  Bacteria  normal  0.976216  normal  0.483194 
 
 
-
 
NC_010682  Rpic_1866  histone family protein DNA-binding protein  52.81 
 
 		 90 aa  104  4e-22  Ralstonia pickettii 12J  Bacteria  normal  0.0187787  hitchhiker  0.00274705 
 
 
-
 
NC_007512  Plut_1957  histone-like DNA-binding protein  58.43 
 
 		 91 aa  103  6e-22  Chlorobium luteolum DSM 273  Bacteria  hitchhiker  0.000024611  normal  0.388646 
 
 
-
 
NC_010622  Bphy_1014  histone family protein DNA-binding protein  58.43 
 
 		 90 aa  103  7e-22  Burkholderia phymatum STM815  Bacteria  normal  0.385833  normal  1 
 
 
-
 
NC_007519  Dde_2752  histone-like DNA-binding protein  59.34 
 
 		 91 aa  103  7e-22  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  1  n/a   
 
 
-
 
NC_007951  Bxe_A2292  nucleoid protein Hbs  58.43 
 
 		 90 aa  103  7e-22  Burkholderia xenovorans LB400  Bacteria  normal  0.337722  normal  0.315371 
 
 
-
 
NC_011059  Paes_0293  histone family protein DNA-binding protein  57.3 
 
 		 94 aa  103  8e-22  Prosthecochloris aestuarii DSM 271  Bacteria  normal  0.416752  normal  0.0238993 
 
 
-
 
NC_010803  Clim_0201  histone family protein DNA-binding protein  58.43 
 
 		 91 aa  103  1e-21  Chlorobium limicola DSM 245  Bacteria  hitchhiker  0.000000429798  n/a   
 
 
-
 
NC_007517  Gmet_1608  histone-like DNA-binding protein  58.43 
 
 		 96 aa  103  1e-21  Geobacter metallireducens GS-15  Bacteria  unclonable  5.49082e-20  normal  1 
 
 
-
 
NC_009483  Gura_4407  histone family protein DNA-binding protein  57.3 
 
 		 94 aa  102  2e-21  Geobacter uraniireducens Rf4  Bacteria  unclonable  0.0000000000192025  n/a   
 
 
-
 
NC_007514  Cag_0362  histone-like DNA-binding protein  57.3 
 
 		 91 aa  102  2e-21  Chlorobium chlorochromatii CaD3  Bacteria  normal  1  n/a   
 
 
-
 
NC_009943  Dole_2857  histone family protein DNA-binding protein  58.89 
 
 		 90 aa  102  2e-21  Desulfococcus oleovorans Hxd3  Bacteria  decreased coverage  0.000000000465869  n/a   
 
 
-
 
NC_010320  Teth514_0687  histone family protein DNA-binding protein  59.55 
 
 		 91 aa  102  2e-21  Thermoanaerobacter sp. X514  Bacteria  normal  0.105584  n/a   
 
 
-
 
NC_012918  GM21_0170  histone family protein DNA-binding protein  55.06 
 
 		 94 aa  101  3e-21  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00000201093 
 
 
-
 
NC_011146  Gbem_0188  histone family protein DNA-binding protein  55.06 
 
 		 94 aa  101  3e-21  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_011060  Ppha_2673  histone family protein DNA-binding protein  57.3 
 
 		 91 aa  101  3e-21  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.156087  n/a   
 
 
-
 
NC_008346  Swol_0083  DNA-binding protein HU (DNA-binding protein II)  55.06 
 
 		 90 aa  100  5e-21  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  1  n/a   
 
 
-
 
NC_008554  Sfum_1430  histone family protein DNA-binding protein  57.78 
 
 		 90 aa  100  5e-21  Syntrophobacter fumaroxidans MPOB  Bacteria  hitchhiker  0.000153062  normal  0.144736 
 
 
-
 
NC_008700  Sama_1227  HU family DNA-binding protein  53.93 
 
 		 90 aa  100  5e-21  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.0000165625  normal  1 
 
 
-
 
NC_011769  DvMF_2799  histone family protein DNA-binding protein  59.34 
 
 		 91 aa  100  7e-21  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  1 
 
 
-
 
NC_010506  Swoo_3110  histone family protein DNA-binding protein  53.93 
 
 		 90 aa  99.4  1e-20  Shewanella woodyi ATCC 51908  Bacteria  unclonable  0.0000000105676  hitchhiker  0.00000299463 
 
 
-
 
NC_008740  Maqu_1837  histone family protein DNA-binding protein  54.44 
 
 		 90 aa  99  2e-20  Marinobacter aquaeolei VT8  Bacteria  hitchhiker  0.00431989  n/a   
 
 
-
 
NC_008782  Ajs_2621  histone family protein DNA-binding protein  56.18 
 
 		 90 aa  99.4  2e-20  Acidovorax sp. JS42  Bacteria  normal  0.348082  normal  0.0833374 
 
 
-
 
NC_011992  Dtpsy_1187  histone family protein DNA-binding protein  56.18 
 
 		 90 aa  99.4  2e-20  Acidovorax ebreus TPSY  Bacteria  normal  1  n/a   
 
 
-
 
NC_008609  Ppro_1181  histone family protein DNA-binding protein  52.81 
 
 		 92 aa  98.6  2e-20  Pelobacter propionicus DSM 2379  Bacteria  normal  0.42545  n/a   
 
 
-
 
NC_008639  Cpha266_0238  histone family protein DNA-binding protein  54.44 
 
 		 91 aa  99.4  2e-20  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  1  n/a   
 
 
-
 
NC_008752  Aave_1666  histone family protein DNA-binding protein  53.93 
 
 		 90 aa  98.2  4e-20  Acidovorax citrulli AAC00-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010002  Daci_2879  histone family protein DNA-binding protein  55.06 
 
 		 90 aa  97.4  5e-20  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008825  Mpe_A1956  nucleoid protein Hbs  53.93 
 
 		 90 aa  97.1  6e-20  Methylibium petroleiphilum PM1  Bacteria  normal  0.582961  normal  0.45981 
 
 
-
 
NC_007498  Pcar_1686  DNA-binding protein HU-beta, NS1(HU-1)  52.81 
 
 		 90 aa  97.4  6e-20  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  6.460310000000001e-19  n/a   
 
 
-
 
NC_012034  Athe_0648  histone family protein DNA-binding protein  55.06 
 
 		 91 aa  97.4  6e-20  Anaerocellum thermophilum DSM 6725  Bacteria  unclonable  0.0000000000417185  n/a   
 
 
-
 
NC_008530  LGAS_0894  nucleoid DNA-binding protein  55.06 
 
 		 91 aa  97.1  7e-20  Lactobacillus gasseri ATCC 33323  Bacteria  hitchhiker  8.08972e-16  hitchhiker  0.000000000000265027 
 
 
-
 
NC_009654  Mmwyl1_1726  histone family protein DNA-binding protein  56.18 
 
 		 90 aa  97.1  8e-20  Marinomonas sp. MWYL1  Bacteria  unclonable  0.00000000326644  hitchhiker  0.00672024 
 
 
-
 
NC_009092  Shew_2505  histone family protein DNA-binding protein  52.81 
 
 		 90 aa  96.7  9e-20  Shewanella loihica PV-4  Bacteria  hitchhiker  0.0000000791734  normal  0.581146 
 
 
-
 
NC_002977  MCA0532  DNA-binding protein HU-beta  53.93 
 
 		 90 aa  96.3  1e-19  Methylococcus capsulatus str. Bath  Bacteria  decreased coverage  0.00043104  n/a   
 
 
-
 
NC_003910  CPS_2063  HU family DNA-binding protein  53.93 
 
 		 91 aa  96.3  1e-19  Colwellia psychrerythraea 34H  Bacteria  normal  0.832344  n/a   
 
 
-
 
NC_012880  Dd703_2873  transcriptional regulator HU subunit beta  55.06 
 
 		 90 aa  96.3  1e-19  Dickeya dadantii Ech703  Bacteria  normal  1  n/a   
 
 
-
 
NC_013421  Pecwa_3261  transcriptional regulator HU subunit beta  55.06 
 
 		 90 aa  96.3  1e-19  Pectobacterium wasabiae WPP163  Bacteria  normal  1  n/a   
 
 
-
 
NC_009831  Ssed_1544  histone family protein DNA-binding protein  52.81 
 
 		 90 aa  96.3  1e-19  Shewanella sediminis HAW-EB3  Bacteria  unclonable  0.000000007734  hitchhiker  0.000745392 
 
 
-
 
NC_007948  Bpro_3065  nucleoid protein Hbs  55.06 
 
 		 90 aa  96.3  1e-19  Polaromonas sp. JS666  Bacteria  normal  0.135138  normal  0.394857 
 
 
-
 
NC_009943  Dole_1717  histone family protein DNA-binding protein  54.44 
 
 		 90 aa  96.7  1e-19  Desulfococcus oleovorans Hxd3  Bacteria  unclonable  0.0000000000293556  n/a   
 
 
-
 
NC_009708  YpsIP31758_3089  transcriptional regulator HU subunit beta  55.06 
 
 		 90 aa  96.3  1e-19  Yersinia pseudotuberculosis IP 31758  Bacteria  unclonable  1.42002e-19  n/a   
 
 
-
 
NC_012917  PC1_1051  transcriptional regulator HU subunit beta  55.06 
 
 		 90 aa  96.3  1e-19  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.593082  n/a   
 
 
-
 
NC_008781  Pnap_1633  histone family protein DNA-binding protein  55.06 
 
 		 90 aa  96.3  1e-19  Polaromonas naphthalenivorans CJ2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009457  VC0395_A1509  DNA-binding protein HU-beta  53.93 
 
 		 90 aa  96.3  1e-19  Vibrio cholerae O395  Bacteria  hitchhiker  0.0000000000490467  n/a   
 
 
-
 
NC_010159  YpAngola_A3051  transcriptional regulator HU subunit beta  55.06 
 
 		 90 aa  96.3  1e-19  Yersinia pestis Angola  Bacteria  hitchhiker  0.00488463  normal  1 
 
 
-
 
NC_010465  YPK_3231  transcriptional regulator HU subunit beta  55.06 
 
 		 90 aa  96.3  1e-19  Yersinia pseudotuberculosis YPIII  Bacteria  normal  1  n/a   
 
 
-
 
NC_008577  Shewana3_2658  histone family protein DNA-binding protein  52.81 
 
 		 90 aa  96.3  1e-19  Shewanella sp. ANA-3  Bacteria  unclonable  0.00000000180426  normal  0.730265 
 
 
-
 
NC_011146  Gbem_1275  histone family protein DNA-binding protein  55.06 
 
 		 91 aa  96.3  1e-19  Geobacter bemidjiensis Bem  Bacteria  decreased coverage  0.0000000292942  n/a   
 
 
-
 
NC_009438  Sputcn32_1493  histone family protein DNA-binding protein  52.81 
 
 		 90 aa  95.9  2e-19  Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.00000000388309  n/a   
 
 
-
 
NC_009052  Sbal_1607  histone family protein DNA-binding protein  52.81 
 
 		 90 aa  95.9  2e-19  Shewanella baltica OS155  Bacteria  hitchhiker  0.0000000022491  n/a   
 
 
-
 
NC_004347  SO_1797  HU family DNA-binding protein  52.81 
 
 		 90 aa  95.9  2e-19  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011663  Sbal223_2747  histone family protein DNA-binding protein  52.81 
 
 		 90 aa  95.9  2e-19  Shewanella baltica OS223  Bacteria  decreased coverage  0.00000000276504  normal  0.581764 
 
 
-
 
NC_010831  Cphamn1_0324  histone family protein DNA-binding protein  53.93 
 
 		 90 aa  95.1  2e-19  Chlorobium phaeobacteroides BS1  Bacteria  normal  0.064189  normal  0.0110025 
 
 
-
 
NC_009665  Shew185_1596  histone family protein DNA-binding protein  52.81 
 
 		 90 aa  95.9  2e-19  Shewanella baltica OS185  Bacteria  unclonable  0.00000000000169185  n/a   
 
 
-
 
NC_009436  Ent638_0907  transcriptional regulator HU subunit beta  55.06 
 
 		 90 aa  95.5  2e-19  Enterobacter sp. 638  Bacteria  normal  0.0908162  normal  1 
 
 
-
 
NC_009997  Sbal195_1630  histone family protein DNA-binding protein  52.81 
 
 		 90 aa  95.9  2e-19  Shewanella baltica OS195  Bacteria  unclonable  0.0000000159632  normal  1 
 
 
-
 
NC_008321  Shewmr4_2492  histone family protein DNA-binding protein  52.81 
 
 		 90 aa  95.9  2e-19  Shewanella sp. MR-4  Bacteria  unclonable  0.000000000348442  normal  0.0842071 
 
 
-
 
NC_008322  Shewmr7_2560  histone family protein DNA-binding protein  52.81 
 
 		 90 aa  95.9  2e-19  Shewanella sp. MR-7  Bacteria  unclonable  0.000000135506  normal  0.0536414 
 
 
-
 
NC_012918  GM21_3008  histone family protein DNA-binding protein  55.06 
 
 		 91 aa  95.9  2e-19  Geobacter sp. M21  Bacteria  n/a    normal  0.341575 
 
 
-
 
NC_009783  VIBHAR_01420  nucleoid DNA-binding protein  52.81 
 
 		 90 aa  95.1  3e-19  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007954  Sden_2492  histone-like DNA-binding protein  51.69 
 
 		 90 aa  94.7  3e-19  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.00401844  n/a   
 
 
-
 
NC_008009  Acid345_4704  histone-like DNA-binding protein  55.06 
 
 		 93 aa  94.4  4e-19  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  0.833222 
 
 
-
 
NC_013385  Adeg_2069  histone family protein DNA-binding protein  55.06 
 
 		 95 aa  94.4  5e-19  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_009901  Spea_2678  histone family protein DNA-binding protein  51.69 
 
 		 90 aa  94  6e-19  Shewanella pealeana ATCC 700345  Bacteria  unclonable  0.0000000000589622  n/a   
 
 
-
 
NC_012791  Vapar_1789  histone family protein DNA-binding protein  51.69 
 
 		 90 aa  94  6e-19  Variovorax paradoxus S110  Bacteria  normal  0.970942  n/a   
 
 
-
 
NC_008345  Sfri_2593  histone family protein DNA-binding protein  51.69 
 
 		 91 aa  94  6e-19  Shewanella frigidimarina NCIMB 400  Bacteria  hitchhiker  0.0000000173721  n/a   
 
 
-
 
NC_003910  CPS_1873  HU family DNA-binding protein  52.81 
 
 		 91 aa  94  7e-19  Colwellia psychrerythraea 34H  Bacteria  normal  0.972501  n/a   
 
 
-
 
NC_011761  AFE_0914  DNA-binding protein HU  51.69 
 
 		 90 aa  94  7e-19  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.196839  n/a   
 
 
-
 
NC_011206  Lferr_1035  histone family protein DNA-binding protein  51.69 
 
 		 90 aa  94  7e-19  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  decreased coverage  0.00000557803  hitchhiker  0.00000000462139 
 
 
-
 
NC_012912  Dd1591_3065  transcriptional regulator HU subunit beta  52.81 
 
 		 90 aa  93.6  8e-19  Dickeya zeae Ech1591  Bacteria  normal  1  n/a   
 
 
-
 
NC_011898  Ccel_2424  histone family protein DNA-binding protein  52.81 
 
 		 91 aa  93.6  8e-19  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.00000000394497  n/a   
 
 
-
 
NC_008786  Veis_2697  histone family protein DNA-binding protein  52.81 
 
 		 105 aa  93.6  9e-19  Verminephrobacter eiseniae EF01-2  Bacteria  normal  1  normal  0.651283 
 
 
-
 
NC_009801  EcE24377A_0476  transcriptional regulator HU subunit beta  53.93 
 
 		 90 aa  92.8  1e-18  Escherichia coli E24377A  Bacteria  hitchhiker  0.000220916  n/a   
 
 
-
 
CP001637  EcDH1_3169  histone family protein DNA-binding protein  53.93 
 
 		 90 aa  92.8  1e-18  Escherichia coli DH1  Bacteria  hitchhiker  0.000005828  n/a   
 
 
-
 
NC_003295  RSc2521  DNA-binding protein HU-beta  54.55 
 
 		 94 aa  93.2  1e-18  Ralstonia solanacearum GMI1000  Bacteria  normal  0.0944475  normal  0.0105947 
 
 
-
 
NC_010468  EcolC_3192  transcriptional regulator HU subunit beta  53.93 
 
 		 90 aa  92.8  1e-18  Escherichia coli ATCC 8739  Bacteria  normal  0.0216859  hitchhiker  0.00242013 
 
 
-
 
NC_011353  ECH74115_0526  transcriptional regulator HU subunit beta  53.93 
 
 		 90 aa  92.8  1e-18  Escherichia coli O157:H7 str. EC4115  Bacteria  hitchhiker  0.00026983  normal  0.698185 
 
 
-
 
NC_007347  Reut_A3392  HU family DNA-binding protein  54.44 
 
 		 92 aa  92.8  1e-18  Ralstonia eutropha JMP134  Bacteria  hitchhiker  0.0000680811  n/a   
 
 
-
 
NC_007404  Tbd_1674  histone-like DNA-binding protein  56.18 
 
 		 90 aa  93.2  1e-18  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  1  normal  0.171237 
 
 
-
 
NC_007484  Noc_1772  histone-like DNA-binding protein  50.56 
 
 		 90 aa  92.8  1e-18  Nitrosococcus oceani ATCC 19707  Bacteria  decreased coverage  0.000757515  n/a   
 
 
-
 
NC_010658  SbBS512_E0363  transcriptional regulator HU subunit beta  53.93 
 
 		 90 aa  92.8  1e-18  Shigella boydii CDC 3083-94  Bacteria  hitchhiker  0.00017145  n/a   
 
 
-
 
NC_009800  EcHS_A0517  transcriptional regulator HU subunit beta  53.93 
 
 		 90 aa  92.8  1e-18  Escherichia coli HS  Bacteria  hitchhiker  0.0000000000441181  n/a   
 
 
-
 
NC_010682  Rpic_2793  histone family protein DNA-binding protein  54.55 
 
 		 94 aa  93.2  1e-18  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010814  Glov_1926  histone family protein DNA-binding protein  52.81 
 
 		 92 aa  92.8  1e-18  Geobacter lovleyi SZ  Bacteria  unclonable  0.0000000201993  n/a   
 
 
-
 
NC_010003  Pmob_1910  histone family protein DNA-binding protein  54.44 
 
 		 90 aa  92.8  1e-18  Petrotoga mobilis SJ95  Bacteria  unclonable  0.00000000311196  n/a   
 
 
-
 
NC_012856  Rpic12D_2386  histone family protein DNA-binding protein  54.55 
 
 		 94 aa  93.2  1e-18  Ralstonia pickettii 12D  Bacteria  normal  0.405821  normal  1 
 
 
-
 
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