49 homologs were found in PanDaTox collection
for query gene DvMF_2441 on replicon NC_011769
Organism: Desulfovibrio vulgaris str. 'Miyazaki F'



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011769  DvMF_2441  putative anti-sigma regulatory factor, serine/threonine protein kinase  100 
 
 
138 aa  278  1e-74  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_008741  Dvul_2982  putative anti-sigma regulatory factor, serine/threonine protein kinase  74.26 
 
 
138 aa  211  1.9999999999999998e-54  Desulfovibrio vulgaris DP4  Bacteria  normal  n/a   
 
 
-
 
NC_008942  Mlab_1452  hypothetical protein  34.33 
 
 
777 aa  81.6  0.000000000000003  Methanocorpusculum labreanum Z  Archaea  normal  normal 
 
 
-
 
NC_007796  Mhun_0063  putative anti-sigma regulatory factor (serine/threonine protein kinase)  39.22 
 
 
140 aa  79.3  0.00000000000001  Methanospirillum hungatei JF-1  Archaea  normal  normal  0.0713993 
 
 
-
 
NC_013216  Dtox_0933  putative anti-sigma regulatory factor, serine/threonine protein kinase  37.31 
 
 
142 aa  79  0.00000000000002  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.0815302  normal  0.189071 
 
 
-
 
NC_008609  Ppro_1525  putative anti-sigma regulatory factor, serine/threonine protein kinase  36.03 
 
 
141 aa  75.9  0.0000000000002  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_009051  Memar_2469  putative anti-sigma regulatory factor, serine/threonine protein kinase  34.31 
 
 
135 aa  73.2  0.000000000001  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_010814  Glov_0750  putative anti-sigma regulatory factor, serine/threonine protein kinase  36.76 
 
 
141 aa  72.4  0.000000000002  Geobacter lovleyi SZ  Bacteria  normal  0.194451  n/a   
 
 
-
 
NC_013204  Elen_2936  putative anti-sigma regulatory factor, serine/threonine protein kinase  36.36 
 
 
140 aa  70.5  0.000000000007  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_007512  Plut_0863  putative anti-sigma regulatory factor  37 
 
 
143 aa  70.5  0.000000000008  Chlorobium luteolum DSM 273  Bacteria  normal  normal  0.286315 
 
 
-
 
NC_007512  Plut_1040  putative anti-sigma regulatory factor (serine/threonine protein kinase)  37 
 
 
143 aa  70.5  0.000000000008  Chlorobium luteolum DSM 273  Bacteria  normal  0.469899  normal  0.536702 
 
 
-
 
NC_008346  Swol_1794  putative anti-sigma regulatory factor, serine/threonine protein kinase  37.11 
 
 
134 aa  70.5  0.000000000008  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_1195  anti-sigma-factor antagonist  34.59 
 
 
269 aa  69.3  0.00000000001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.123525  normal 
 
 
-
 
NC_011832  Mpal_1929  putative anti-sigma regulatory factor, serine/threonine protein kinase  34.58 
 
 
139 aa  66.6  0.00000000009  Methanosphaerula palustris E1-9c  Archaea  normal  0.0887571  normal  0.148865 
 
 
-
 
NC_009523  RoseRS_2161  anti-sigma-factor antagonist  33.08 
 
 
250 aa  66.6  0.0000000001  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009712  Mboo_1160  putative anti-sigma regulatory factor, serine/threonine protein kinase  32.06 
 
 
138 aa  65.1  0.0000000003  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.620968  normal 
 
 
-
 
NC_011831  Cagg_2555  anti-sigma-factor antagonist  31.75 
 
 
249 aa  61.6  0.000000003  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_1422  anti-sigma-factor antagonist  33.58 
 
 
250 aa  61.6  0.000000004  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_002620  TC0837  RsbW protein, putative  31.01 
 
 
152 aa  61.6  0.000000004  Chlamydia muridarum Nigg  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_2857  putative anti-sigma regulatory factor, serine/threonine protein kinase  33.33 
 
 
136 aa  61.2  0.000000005  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_4032  putative anti-sigma regulatory factor, serine/threonine protein kinase  33.67 
 
 
155 aa  59.3  0.00000001  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_013501  Rmar_2331  putative anti-sigma regulatory factor, serine/threonine protein kinase  28.79 
 
 
151 aa  57  0.00000008  Rhodothermus marinus DSM 4252  Bacteria  normal  0.571842  n/a   
 
 
-
 
NC_008312  Tery_5013  putative anti-sigma regulatory factor, serine/threonine protein kinase  26.87 
 
 
141 aa  56.6  0.0000001  Trichodesmium erythraeum IMS101  Bacteria  normal  normal 
 
 
-
 
NC_002977  MCA1666  sensor histidine kinase  37.76 
 
 
142 aa  56.6  0.0000001  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_4167  cyclic nucleotide-binding protein  33.33 
 
 
570 aa  54.7  0.0000005  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_1874  putative anti-sigma regulatory factor, serine/threonine protein kinase  30.3 
 
 
137 aa  53.5  0.0000009  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.122382  normal 
 
 
-
 
NC_009511  Swit_1493  putative anti-sigma regulatory factor, serine/threonine protein kinase  40.38 
 
 
132 aa  50.8  0.000006  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_03913  hypothetical protein  30.94 
 
 
143 aa  50.8  0.000006  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_2419  cyclic nucleotide-binding protein  28.57 
 
 
563 aa  50.8  0.000006  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.871595  normal 
 
 
-
 
NC_008148  Rxyl_2664  putative anti-sigma regulatory factor, serine/threonine protein kinase  30.53 
 
 
139 aa  49.7  0.00001  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_1990  sensor histidine kinase  31.31 
 
 
132 aa  49.3  0.00002  Dechloromonas aromatica RCB  Bacteria  normal  0.415496  normal  0.485112 
 
 
-
 
NC_013440  Hoch_4441  protein serine phosphatase with GAF(s) sensor(s)  31.96 
 
 
792 aa  48.5  0.00003  Haliangium ochraceum DSM 14365  Bacteria  normal  0.794262  normal 
 
 
-
 
NC_011884  Cyan7425_0700  putative anti-sigma regulatory factor, serine/threonine protein kinase  26.43 
 
 
136 aa  45.4  0.0003  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_009712  Mboo_1022  putative anti-sigma regulatory factor, serine/threonine protein kinase  25.74 
 
 
116 aa  45.1  0.0004  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.126342  normal 
 
 
-
 
NC_007519  Dde_0721  serine phosphatase  30.93 
 
 
885 aa  45.1  0.0004  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_2452  putative anti-sigma regulatory factor, serine/threonine protein kinase  30.25 
 
 
147 aa  44.7  0.0005  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_009718  Fnod_1087  putative anti-sigma regulatory factor, serine/threonine protein kinase  34.15 
 
 
141 aa  44.3  0.0006  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_2527  putative anti-sigma regulatory factor, serine/threonine protein kinase  32.08 
 
 
147 aa  43.9  0.0007  Xanthobacter autotrophicus Py2  Bacteria  normal  0.557848  normal 
 
 
-
 
NC_009486  Tpet_0196  putative anti-sigma regulatory factor, serine/threonine protein kinase  27.55 
 
 
136 aa  43.9  0.0008  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_2065  putative anti-sigma regulatory factor, serine/threonine protein kinase  26.89 
 
 
143 aa  43.5  0.001  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_010483  TRQ2_0194  putative anti-sigma regulatory factor, serine/threonine protein kinase  29.59 
 
 
136 aa  43.5  0.001  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_011060  Ppha_1014  putative anti-sigma regulatory factor, serine/threonine protein kinase  24.74 
 
 
147 aa  42  0.003  Pelodictyon phaeoclathratiforme BU-1  Bacteria  hitchhiker  0.000121242  n/a   
 
 
-
 
NC_013223  Dret_1522  putative anti-sigma regulatory factor, serine/threonine protein kinase  30 
 
 
147 aa  42  0.003  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_008044  TM1040_0065  putative anti-sigma regulatory factor, serine/threonine protein kinase  30.63 
 
 
146 aa  41.6  0.004  Ruegeria sp. TM1040  Bacteria  normal  0.459983  normal 
 
 
-
 
NC_009483  Gura_2043  putative anti-sigma regulatory factor, serine/threonine protein kinase  29.63 
 
 
141 aa  40.8  0.007  Geobacter uraniireducens Rf4  Bacteria  unclonable  0.0000000000388253  n/a   
 
 
-
 
NC_011146  Gbem_2650  putative anti-sigma regulatory factor, serine/threonine protein kinase  27.69 
 
 
141 aa  40.4  0.009  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1584  putative anti-sigma regulatory factor, serine/threonine protein kinase  27.69 
 
 
141 aa  40.4  0.009  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_002939  GSU1426  rsbW protein, putative  29.32 
 
 
149 aa  40  0.009  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_002977  MCA1685  anti-sigma B factor  27.34 
 
 
142 aa  40  0.01  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
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