More than 300 homologs were found in PanDaTox collection
for query gene DvMF_1991 on replicon NC_011769
Organism: Desulfovibrio vulgaris str. 'Miyazaki F'



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011769  DvMF_1991  response regulator receiver protein  100 
 
 
153 aa  305  2.0000000000000002e-82  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_008751  Dvul_0150  response regulator receiver protein  74.4 
 
 
134 aa  160  5.0000000000000005e-39  Desulfovibrio vulgaris DP4  Bacteria  normal  0.89872  normal  0.680282 
 
 
-
 
NC_011883  Ddes_0018  response regulator receiver protein  59.35 
 
 
135 aa  150  5e-36  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  decreased coverage  0.00000218096  n/a   
 
 
-
 
NC_008554  Sfum_0648  response regulator receiver protein  56.8 
 
 
151 aa  146  9e-35  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_1807  response regulator receiver protein  55.28 
 
 
139 aa  135  2e-31  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2042  response regulator receiver protein  52.99 
 
 
147 aa  125  2.0000000000000002e-28  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_0314  response regulator receiver protein  52.34 
 
 
131 aa  125  2.0000000000000002e-28  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0234873  n/a   
 
 
-
 
NC_009943  Dole_1357  response regulator receiver protein  55.17 
 
 
144 aa  125  3e-28  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.48275  n/a   
 
 
-
 
NC_009943  Dole_1352  response regulator receiver protein  49.19 
 
 
139 aa  114  3.9999999999999997e-25  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00001959  n/a   
 
 
-
 
NC_008554  Sfum_0618  response regulator receiver protein  50 
 
 
157 aa  110  5e-24  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_0313  response regulator receiver protein  50 
 
 
143 aa  110  5e-24  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0254543  n/a   
 
 
-
 
NC_009943  Dole_1350  response regulator receiver protein  47.01 
 
 
147 aa  110  7.000000000000001e-24  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00189482  n/a   
 
 
-
 
NC_009943  Dole_1351  response regulator receiver protein  48.09 
 
 
141 aa  109  1.0000000000000001e-23  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000171187  n/a   
 
 
-
 
NC_009943  Dole_1361  response regulator receiver protein  44.93 
 
 
147 aa  105  2e-22  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1360  response regulator receiver sensor signal transduction histidine kinase  48.21 
 
 
403 aa  105  2e-22  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0620  response regulator receiver protein  46.15 
 
 
142 aa  105  3e-22  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_008751  Dvul_0173  response regulator receiver protein  46.49 
 
 
121 aa  105  3e-22  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_013223  Dret_0097  two component, sigma54 specific, transcriptional regulator, Fis family  37.5 
 
 
448 aa  104  4e-22  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_011883  Ddes_1566  response regulator receiver protein  46.67 
 
 
126 aa  101  3e-21  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_1843  two component, sigma54 specific, transcriptional regulator, Fis family  38.93 
 
 
465 aa  101  4e-21  Thauera sp. MZ1T  Bacteria  normal  0.798265  n/a   
 
 
-
 
NC_009523  RoseRS_3770  response regulator receiver protein  40.31 
 
 
391 aa  100  8e-21  Roseiflexus sp. RS-1  Bacteria  normal  unclonable  0.0000112062 
 
 
-
 
NC_008554  Sfum_0654  response regulator receiver protein  43.9 
 
 
413 aa  100  8e-21  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.113697  normal 
 
 
-
 
NC_007517  Gmet_0010  PAS/PAC sensor hybrid histidine kinase  39.23 
 
 
508 aa  100  1e-20  Geobacter metallireducens GS-15  Bacteria  normal  0.0502065  normal 
 
 
-
 
NC_011769  DvMF_1988  response regulator receiver protein  42.98 
 
 
119 aa  100  1e-20  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_007519  Dde_0321  response regulator receiver domain-containing protein  47.41 
 
 
122 aa  100  1e-20  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_1769  response regulator receiver protein  47.37 
 
 
129 aa  99  2e-20  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_008751  Dvul_0407  response regulator receiver protein  46.49 
 
 
128 aa  99.4  2e-20  Desulfovibrio vulgaris DP4  Bacteria  normal  0.627834  normal  0.12665 
 
 
-
 
NC_008554  Sfum_0657  response regulator receiver protein  51.28 
 
 
143 aa  99  2e-20  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.771795  normal 
 
 
-
 
NC_009483  Gura_0009  multi-sensor signal transduction histidine kinase  41.23 
 
 
508 aa  98.6  3e-20  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2037  response regulator receiver protein  41.53 
 
 
120 aa  98.2  4e-20  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_2331  response regulator receiver protein  37.98 
 
 
142 aa  97.8  5e-20  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00000000425244  n/a   
 
 
-
 
NC_007519  Dde_0695  response regulator receiver domain-containing protein  45.97 
 
 
141 aa  97.8  5e-20  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.396926  n/a   
 
 
-
 
NC_008609  Ppro_0710  two component, sigma54 specific, Fis family transcriptional regulator  41.59 
 
 
456 aa  97.1  8e-20  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_2217  two component transcriptional regulator, winged helix family  38.93 
 
 
276 aa  96.7  1e-19  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00294817  normal 
 
 
-
 
NC_007517  Gmet_0812  two component, sigma54 specific, Fis family transcriptional regulator  40.83 
 
 
453 aa  96.7  1e-19  Geobacter metallireducens GS-15  Bacteria  normal  0.0257022  hitchhiker  0.00000328811 
 
 
-
 
NC_008751  Dvul_0403  response regulator receiver sensor signal transduction histidine kinase  45.67 
 
 
374 aa  96.3  1e-19  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.150899 
 
 
-
 
NC_013173  Dbac_2269  response regulator receiver protein  42.74 
 
 
130 aa  95.5  2e-19  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.740525  n/a   
 
 
-
 
NC_011769  DvMF_2334  response regulator receiver protein  45.04 
 
 
151 aa  95.9  2e-19  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_011769  DvMF_0215  two component, sigma54 specific, transcriptional regulator, Fis family  41.88 
 
 
528 aa  95.1  3e-19  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.0571306 
 
 
-
 
NC_008554  Sfum_1934  two component, sigma54 specific, Fis family transcriptional regulator  40.16 
 
 
476 aa  95.1  3e-19  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.808753  normal  0.132653 
 
 
-
 
NC_008554  Sfum_3765  two component, sigma54 specific, Fis family transcriptional regulator  40.34 
 
 
463 aa  95.1  3e-19  Syntrophobacter fumaroxidans MPOB  Bacteria  decreased coverage  0.000821276  normal 
 
 
-
 
NC_009675  Anae109_2205  two component Fis family transcriptional regulator  42.15 
 
 
182 aa  95.1  3e-19  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.143694 
 
 
-
 
NC_008609  Ppro_1655  two component, sigma54 specific, Fis family transcriptional regulator  39.06 
 
 
462 aa  95.1  3e-19  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.000025661  n/a   
 
 
-
 
NC_011769  DvMF_1773  response regulator receiver sensor signal transduction histidine kinase  47.41 
 
 
408 aa  94.7  4e-19  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_008554  Sfum_0656  response regulator receiver protein  44.74 
 
 
129 aa  94.7  4e-19  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.663964  normal 
 
 
-
 
NC_002939  GSU0008  sensory box histidine kinase/response regulator  38.76 
 
 
516 aa  94  6e-19  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011060  Ppha_1800  two component, sigma54 specific, transcriptional regulator, Fis family  34.4 
 
 
464 aa  94.4  6e-19  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.458412  n/a   
 
 
-
 
NC_009943  Dole_1358  response regulator receiver protein  42.98 
 
 
144 aa  94  6e-19  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.107991  n/a   
 
 
-
 
NC_008751  Dvul_2720  multi-sensor signal transduction histidine kinase  40.16 
 
 
657 aa  93.6  9e-19  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.312815 
 
 
-
 
NC_009483  Gura_2678  two component, sigma-54 specific, Fis family transcriptional regulator  38.52 
 
 
457 aa  93.2  1e-18  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1129  sigma-54 dependent DNA-binding response regulator  39.17 
 
 
453 aa  92.8  1e-18  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_1114  response regulator receiver modulated serine phosphatase  38.93 
 
 
391 aa  93.2  1e-18  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_013385  Adeg_0532  two component, sigma54 specific, transcriptional regulator, Fis family  40 
 
 
470 aa  93.6  1e-18  Ammonifex degensii KC4  Bacteria  hitchhiker  0.00706375  n/a   
 
 
-
 
NC_011769  DvMF_2550  multi-sensor signal transduction histidine kinase  40.16 
 
 
685 aa  93.2  1e-18  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_013173  Dbac_2713  two component, sigma54 specific, transcriptional regulator, Fis family  40.5 
 
 
454 aa  92.4  2e-18  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0632  response regulator receiver protein  40 
 
 
135 aa  92.4  2e-18  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_2346  response regulator receiver protein  46.88 
 
 
136 aa  92.8  2e-18  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_009483  Gura_3744  putative GAF sensor protein  35.71 
 
 
323 aa  92.4  2e-18  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
CP001509  ECD_02147  fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein  39.66 
 
 
461 aa  91.7  3e-18  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_1438  two component, sigma54 specific, transcriptional regulator, Fis family  39.66 
 
 
461 aa  91.7  3e-18  Escherichia coli DH1  Bacteria  normal  0.445705  n/a   
 
 
-
 
NC_010468  EcolC_1430  acetoacetate metabolism regulatory protein AtoC  39.66 
 
 
461 aa  91.7  3e-18  Escherichia coli ATCC 8739  Bacteria  normal  0.324678  hitchhiker  0.00137179 
 
 
-
 
NC_008751  Dvul_2822  response regulator receiver protein  43.55 
 
 
135 aa  92  3e-18  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_008789  Hhal_1340  two component, sigma54 specific, Fis family transcriptional regulator  39.32 
 
 
457 aa  91.7  3e-18  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A2361  acetoacetate metabolism regulatory protein AtoC  39.66 
 
 
461 aa  91.7  3e-18  Escherichia coli HS  Bacteria  normal  0.18992  n/a   
 
 
-
 
NC_012892  B21_02106  hypothetical protein  39.66 
 
 
461 aa  91.7  3e-18  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0495  two component, sigma-54 specific, Fis family transcriptional regulator  37.7 
 
 
456 aa  91.7  3e-18  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0633  response regulator receiver protein  44.35 
 
 
133 aa  91.7  3e-18  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.546392  normal 
 
 
-
 
NC_011830  Dhaf_4779  two component, sigma54 specific, transcriptional regulator, Fis family  36.67 
 
 
494 aa  91.7  3e-18  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_3572  two component, sigma-54 specific, Fis family transcriptional regulator  37.5 
 
 
457 aa  92  3e-18  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_2739  two component, sigma54 specific, Fis family transcriptional regulator  34.96 
 
 
451 aa  91.7  3e-18  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.693002  n/a   
 
 
-
 
NC_007517  Gmet_0555  two component, sigma54 specific, Fis family transcriptional regulator  36.43 
 
 
457 aa  91.3  4e-18  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_009675  Anae109_1951  two component, sigma54 specific, Fis family transcriptional regulator  41.6 
 
 
470 aa  91.3  4e-18  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.516267  normal 
 
 
-
 
NC_008751  Dvul_2709  response regulator receiver sensor signal transduction histidine kinase  45.22 
 
 
501 aa  91.3  4e-18  Desulfovibrio vulgaris DP4  Bacteria  normal  0.710197  normal  0.745824 
 
 
-
 
NC_007912  Sde_0499  response regulator receiver domain-containing protein  38.02 
 
 
473 aa  91.3  4e-18  Saccharophagus degradans 2-40  Bacteria  normal  0.021061  normal 
 
 
-
 
NC_008609  Ppro_1179  two component, sigma54 specific, Fis family transcriptional regulator  40 
 
 
457 aa  91.3  4e-18  Pelobacter propionicus DSM 2379  Bacteria  normal  0.655382  n/a   
 
 
-
 
NC_010814  Glov_1377  two component, sigma54 specific, transcriptional regulator, Fis family  37.21 
 
 
462 aa  91.7  4e-18  Geobacter lovleyi SZ  Bacteria  normal  0.244526  n/a   
 
 
-
 
NC_010498  EcSMS35_2369  acetoacetate metabolism regulatory protein AtoC  41.28 
 
 
461 aa  91.3  5e-18  Escherichia coli SMS-3-5  Bacteria  normal  0.0790211  normal 
 
 
-
 
NC_013223  Dret_2392  two component, sigma54 specific, transcriptional regulator, Fis family  37.9 
 
 
458 aa  91.3  5e-18  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0321511  normal 
 
 
-
 
NC_009943  Dole_2335  response regulator receiver protein  41.73 
 
 
411 aa  90.9  5e-18  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.0000388714  n/a   
 
 
-
 
NC_013173  Dbac_0976  anti-sigma-factor antagonist  40.59 
 
 
237 aa  91.3  5e-18  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU2915  sigma-54 dependent DNA-binding response regulator  37.7 
 
 
457 aa  90.5  7e-18  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_1797  two component, sigma54 specific, transcriptional regulator, Fis family  40.83 
 
 
461 aa  90.5  7e-18  Rhodothermus marinus DSM 4252  Bacteria  normal  0.774224  n/a   
 
 
-
 
NC_007519  Dde_3715  multi-sensor signal transduction histidine kinase  35.25 
 
 
653 aa  90.5  8e-18  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1777  two component, sigma54 specific, Fis family transcriptional regulator  37.21 
 
 
465 aa  90.5  8e-18  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_3819  two component, sigma54 specific, transcriptional regulator, Fis family  36.43 
 
 
455 aa  90.1  9e-18  Geobacter bemidjiensis Bem  Bacteria  normal  0.785821  n/a   
 
 
-
 
NC_011883  Ddes_0816  response regulator receiver protein  43.48 
 
 
157 aa  90.1  9e-18  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_2255  two component transcriptional regulator, Fis family  39.83 
 
 
185 aa  89.7  1e-17  Anaeromyxobacter sp. K  Bacteria  normal  0.0449716  n/a   
 
 
-
 
NC_011891  A2cp1_2343  two component transcriptional regulator, Fis family  39.83 
 
 
185 aa  89.7  1e-17  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.888574  n/a   
 
 
-
 
NC_009972  Haur_2366  two component, sigma54 specific, Fis family transcriptional regulator  38.6 
 
 
385 aa  89.7  1e-17  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.0000342445  n/a   
 
 
-
 
NC_007498  Pcar_1960  response regulator transcription factor  34.4 
 
 
471 aa  90.1  1e-17  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_2345  two component signal transduction response regulator  40.71 
 
 
455 aa  89.7  1e-17  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00459366  n/a   
 
 
-
 
NC_011145  AnaeK_1886  two component, sigma54 specific, transcriptional regulator, Fis family  38.4 
 
 
461 aa  89.7  1e-17  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_1607  two component Fis family transcriptional regulator  39.83 
 
 
185 aa  89.7  1e-17  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.016434  n/a   
 
 
-
 
NC_007760  Adeh_1992  two component, sigma54 specific, Fis family transcriptional regulator  38.4 
 
 
460 aa  90.1  1e-17  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_2795  two component transcriptional regulator  36.59 
 
 
266 aa  89.7  1e-17  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_008751  Dvul_0017  two component, sigma54 specific, Fis family transcriptional regulator  41.18 
 
 
459 aa  90.1  1e-17  Desulfovibrio vulgaris DP4  Bacteria  normal  0.120309  normal 
 
 
-
 
NC_011769  DvMF_1772  response regulator receiver protein  44.07 
 
 
151 aa  89  2e-17  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_007519  Dde_0328  response regulator receiver domain-containing protein  38.73 
 
 
406 aa  89  2e-17  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.918345  n/a   
 
 
-
 
NC_007760  Adeh_1908  two component, sigma54 specific, Fis family transcriptional regulator  41.8 
 
 
473 aa  89.4  2e-17  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2271  response regulator receiver protein  43.8 
 
 
127 aa  89.4  2e-17  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.420434  n/a   
 
 
-
 
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