4 homologs were found in PanDaTox collection
for query gene Dshi_1950 on replicon NC_009952
Organism: Dinoroseobacter shibae DFL 12



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009952  Dshi_1950  hypothetical protein  100 
 
 
199 aa  408  1e-113  Dinoroseobacter shibae DFL 12  Bacteria  decreased coverage  0.000104979  hitchhiker  0.0000770868 
 
 
-
 
NC_008554  Sfum_0219  type I phosphodiesterase/nucleotide pyrophosphatase  40.32 
 
 
964 aa  141  6e-33  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.205054 
 
 
-
 
NC_013440  Hoch_2295  type I phosphodiesterase/nucleotide pyrophosphatase  41.18 
 
 
192 aa  140  1.9999999999999998e-32  Haliangium ochraceum DSM 14365  Bacteria  normal  0.176874  normal 
 
 
-
 
NC_013926  Aboo_0233  type I phosphodiesterase/nucleotide pyrophosphatase  33.69 
 
 
186 aa  93.6  2e-18  Aciduliprofundum boonei T469  Archaea  unclonable  3.9384e-16  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>