9 homologs were found in PanDaTox collection
for query gene Dshi_0056 on replicon NC_009952
Organism: Dinoroseobacter shibae DFL 12



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009952  Dshi_0056  hypothetical protein  100 
 
 		 164 aa  318  1.9999999999999998e-86  Dinoroseobacter shibae DFL 12  Bacteria  normal  1  hitchhiker  0.0000000000644124 
 
 
-
 
NC_007493  RSP_0839  secreted periplasmic protein  45.28 
 
 		 162 aa  132  1.9999999999999998e-30  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009049  Rsph17029_2497  secreted periplasmic protein  45.28 
 
 		 162 aa  132  1.9999999999999998e-30  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  1  normal  0.72457 
 
 
-
 
NC_009428  Rsph17025_3136  hypothetical protein  43.4 
 
 		 162 aa  124  6e-28  Rhodobacter sphaeroides ATCC 17025  Bacteria  hitchhiker  0.00952291  hitchhiker  0.00000280076 
 
 
-
 
NC_008044  TM1040_0044  putative lipoprotein  43.56 
 
 		 177 aa  119  1.9999999999999998e-26  Ruegeria sp. TM1040  Bacteria  normal  1  normal  0.288317 
 
 
-
 
NC_008686  Pden_2766  secreted periplasmic protein  42.6 
 
 		 161 aa  108  3e-23  Paracoccus denitrificans PD1222  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007802  Jann_0410  putative lipoprotein  40.74 
 
 		 160 aa  98.2  4e-20  Jannaschia sp. CCS1  Bacteria  normal  0.936059  normal  1 
 
 
-
 
NC_007643  Rru_A3630  twin-arginine translocation pathway signal  29.05 
 
 		 187 aa  48.9  0.00003  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  1  n/a   
 
 
-
 
NC_008347  Mmar10_2958  hypothetical protein  26.45 
 
 		 167 aa  46.2  0.0002  Maricaulis maris MCS10  Bacteria  normal  1  normal  1 
 
 
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