12 homologs were found in PanDaTox collection
for query gene Dshi_0052 on replicon NC_009952
Organism: Dinoroseobacter shibae DFL 12



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009952  Dshi_0052  hypothetical protein  100 
 
 		 70 aa  137  4.999999999999999e-32  Dinoroseobacter shibae DFL 12  Bacteria  normal  1  hitchhiker  0.00000000000489669 
 
 
-
 
NC_010511  M446_3207  hypothetical protein  56.25 
 
 		 122 aa  67.8  0.00000000005  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  0.215578 
 
 
-
 
NC_010172  Mext_1252  hypothetical protein  52.24 
 
 		 125 aa  66.6  0.0000000001  Methylobacterium extorquens PA1  Bacteria  normal  0.439706  normal  0.500104 
 
 
-
 
NC_011757  Mchl_1413  hypothetical protein  52.24 
 
 		 125 aa  66.6  0.0000000001  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.738507  normal  0.303527 
 
 
-
 
NC_011894  Mnod_4529  hypothetical protein  54.69 
 
 		 124 aa  66.6  0.0000000001  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.100084  n/a   
 
 
-
 
NC_010725  Mpop_1199  hypothetical protein  52.24 
 
 		 124 aa  65.1  0.0000000003  Methylobacterium populi BJ001  Bacteria  normal  0.309987  normal  0.710825 
 
 
-
 
NC_010505  Mrad2831_3183  hypothetical protein  48 
 
 		 124 aa  60.5  0.000000008  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.706752  normal  1 
 
 
-
 
NC_010531  Pnec_1267  hypothetical protein  49.02 
 
 		 113 aa  46.2  0.0002  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  1  normal  0.224169 
 
 
-
 
NC_010676  Bphyt_6905  hypothetical protein  52.27 
 
 		 107 aa  44.3  0.0005  Burkholderia phytofirmans PsJN  Bacteria  normal  0.187347  normal  0.419367 
 
 
-
 
NC_011989  Avi_9910  hypothetical protein  50 
 
 		 114 aa  44.3  0.0006  Agrobacterium vitis S4  Bacteria  normal  1  n/a   
 
 
-
 
NC_010623  Bphy_3106  hypothetical protein  44.07 
 
 		 106 aa  42.7  0.002  Burkholderia phymatum STM815  Bacteria  normal  0.053259  normal  0.167409 
 
 
-
 
NC_009379  Pnuc_1610  hypothetical protein  46.81 
 
 		 115 aa  42  0.003  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  1  n/a   
 
 
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