More than 300 homologs were found in PanDaTox collection
for query gene Dred_1078 on replicon NC_009253
Organism: Desulfotomaculum reducens MI-1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009674  Bcer98_2870  1-deoxy-D-xylulose-5-phosphate synthase  56.24 
 
 		 630 aa  714    Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.016121  n/a   
 
 
-
 
NC_010320  Teth514_1540  1-deoxy-D-xylulose-5-phosphate synthase  58.23 
 
 		 620 aa  739    Thermoanaerobacter sp. X514  Bacteria  hitchhiker  0.00810208  n/a   
 
 
-
 
NC_002936  DET0745  1-deoxy-D-xylulose-5-phosphate synthase  51.77 
 
 		 647 aa  661    Dehalococcoides ethenogenes 195  Bacteria  normal  1  n/a   
 
 
-
 
NC_002939  GSU0686  1-deoxy-D-xylulose-5-phosphate synthase  61.55 
 
 		 637 aa  793    Geobacter sulfurreducens PCA  Bacteria  normal  0.351489  n/a   
 
 
-
 
NC_002939  GSU1764  1-deoxy-D-xylulose-5-phosphate synthase  56.94 
 
 		 626 aa  738    Geobacter sulfurreducens PCA  Bacteria  normal  0.0479282  n/a   
 
 
-
 
NC_009976  P9211_08521  1-deoxy-D-xylulose-5-phosphate synthase  52.56 
 
 		 643 aa  651    Prochlorococcus marinus str. MIT 9211  Bacteria  normal  0.68369  hitchhiker  0.000952628 
 
 
-
 
NC_008783  BARBAKC583_0400  1-deoxy-D-xylulose-5-phosphate synthase  50.95 
 
 		 638 aa  636    Bartonella bacilliformis KC583  Bacteria  normal  1  n/a   
 
 
-
 
NC_008817  P9515_09901  1-deoxy-D-xylulose-5-phosphate synthase  49.92 
 
 		 631 aa  638    Prochlorococcus marinus str. MIT 9515  Bacteria  normal  1  n/a   
 
 
-
 
NC_009675  Anae109_1136  deoxyxylulose-5-phosphate synthase  53.57 
 
 		 635 aa  654    Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  hitchhiker  0.00423359 
 
 
-
 
NC_003909  BCE_4249  1-deoxy-D-xylulose-5-phosphate synthase  56.73 
 
 		 630 aa  719    Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.0000543695  n/a   
 
 
-
 
NC_011146  Gbem_3362  1-deoxy-D-xylulose-5-phosphate synthase  58.86 
 
 		 635 aa  741    Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_011769  DvMF_0126  1-deoxy-D-xylulose-5-phosphate synthase  54.02 
 
 		 646 aa  679    Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.410155 
 
 
-
 
NC_012918  GM21_3025  1-deoxy-D-xylulose-5-phosphate synthase  58.16 
 
 		 646 aa  743    Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_011992  Dtpsy_0956  1-deoxy-D-xylulose-5-phosphate synthase  51.14 
 
 		 629 aa  636    Acidovorax ebreus TPSY  Bacteria  normal  0.922207  n/a   
 
 
-
 
NC_005945  BAS4081  1-deoxy-D-xylulose-5-phosphate synthase  56.73 
 
 		 630 aa  719    Bacillus anthracis str. Sterne  Bacteria  normal  0.491332  n/a   
 
 
-
 
NC_005957  BT9727_3919  1-deoxy-D-xylulose-5-phosphate synthase  56.73 
 
 		 630 aa  719    Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.000000000317792  n/a   
 
 
-
 
NC_006274  BCZK3930  1-deoxy-D-xylulose-5-phosphate synthase  56.73 
 
 		 630 aa  719    Bacillus cereus E33L  Bacteria  normal  0.0146607  n/a   
 
 
-
 
NC_009483  Gura_2175  1-deoxy-D-xylulose-5-phosphate synthase  58.27 
 
 		 620 aa  736    Geobacter uraniireducens Rf4  Bacteria  normal  0.0116264  n/a   
 
 
-
 
NC_010814  Glov_2182  1-deoxy-D-xylulose-5-phosphate synthase  56.73 
 
 		 625 aa  740    Geobacter lovleyi SZ  Bacteria  normal  0.0455646  n/a   
 
 
-
 
NC_007298  Daro_3061  1-deoxy-D-xylulose-5-phosphate synthase  53.4 
 
 		 618 aa  646    Dechloromonas aromatica RCB  Bacteria  hitchhiker  0.004887  hitchhiker  0.00000111191 
 
 
-
 
NC_007335  PMN2A_0300  1-deoxy-D-xylulose-5-phosphate synthase  52.25 
 
 		 628 aa  644    Prochlorococcus marinus str. NATL2A  Bacteria  normal  0.533137  n/a   
 
 
-
 
NC_011901  Tgr7_0832  1-deoxy-D-xylulose-5-phosphate synthase  52.85 
 
 		 640 aa  637    Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.111285  n/a   
 
 
-
 
NC_013552  DhcVS_652  1-deoxy-D-xylulose-5-phosphate synthase  50.56 
 
 		 647 aa  651    Dehalococcoides sp. VS  Bacteria  normal  1  n/a   
 
 
-
 
NC_011658  BCAH187_A4307  1-deoxy-D-xylulose-5-phosphate synthase  56.73 
 
 		 630 aa  719    Bacillus cereus AH187  Bacteria  unclonable  0.0000000950231  n/a   
 
 
-
 
NC_007413  Ava_4532  1-deoxy-D-xylulose-5-phosphate synthase  54.53 
 
 		 635 aa  687    Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011059  Paes_1686  1-deoxy-D-xylulose-5-phosphate synthase  50.72 
 
 		 659 aa  641    Prosthecochloris aestuarii DSM 271  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007484  Noc_1743  1-deoxy-D-xylulose-5-phosphate synthase  50.4 
 
 		 640 aa  641    Nitrosococcus oceani ATCC 19707  Bacteria  normal  1  n/a   
 
 
-
 
NC_013385  Adeg_1398  deoxyxylulose-5-phosphate synthase  64.99 
 
 		 629 aa  798    Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_011725  BCB4264_A4287  1-deoxy-D-xylulose-5-phosphate synthase  56.73 
 
 		 630 aa  719    Bacillus cereus B4264  Bacteria  unclonable  0.000332787  n/a   
 
 
-
 
NC_013205  Aaci_2448  deoxyxylulose-5-phosphate synthase  55.23 
 
 		 631 aa  715    Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_007498  Pcar_1667  1-deoxy-D-xylulose-5-phosphate synthase  57.67 
 
 		 634 aa  738    Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00000640226  n/a   
 
 
-
 
NC_009943  Dole_1662  deoxyxylulose-5-phosphate synthase  54.22 
 
 		 626 aa  696    Desulfococcus oleovorans Hxd3  Bacteria  normal  0.184143  n/a   
 
 
-
 
NC_011661  Dtur_1044  deoxyxylulose-5-phosphate synthase  52.66 
 
 		 618 aa  657    Dictyoglomus turgidum DSM 6724  Bacteria  normal  0.213907  n/a   
 
 
-
 
NC_007513  Syncc9902_1069  1-deoxy-D-xylulose-5-phosphate synthase  52.94 
 
 		 643 aa  645    Synechococcus sp. CC9902  Bacteria  normal  1  n/a   
 
 
-
 
NC_007516  Syncc9605_1430  1-deoxy-D-xylulose-5-phosphate synthase  52.73 
 
 		 643 aa  646    Synechococcus sp. CC9605  Bacteria  normal  1  normal  0.0817623 
 
 
-
 
NC_007517  Gmet_1934  1-deoxy-D-xylulose-5-phosphate synthase  59.42 
 
 		 625 aa  761    Geobacter metallireducens GS-15  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007517  Gmet_2822  1-deoxy-D-xylulose-5-phosphate synthase  61.53 
 
 		 635 aa  783    Geobacter metallireducens GS-15  Bacteria  normal  0.553695  normal  0.10664 
 
 
-
 
NC_007519  Dde_2200  1-deoxy-D-xylulose-5-phosphate synthase  54.4 
 
 		 661 aa  692    Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  1  n/a   
 
 
-
 
NC_007530  GBAA_4400  1-deoxy-D-xylulose-5-phosphate synthase  56.73 
 
 		 630 aa  719    Bacillus anthracis str. 'Ames Ancestor'  Bacteria  hitchhiker  0.0000595966  n/a   
 
 
-
 
NC_011830  Dhaf_3488  deoxyxylulose-5-phosphate synthase  62.25 
 
 		 631 aa  783    Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.0451312  n/a   
 
 
-
 
NC_007577  PMT9312_0893  1-deoxy-D-xylulose-5-phosphate synthase  50.8 
 
 		 629 aa  656    Prochlorococcus marinus str. MIT 9312  Bacteria  normal  1  n/a   
 
 
-
 
NC_007604  Synpcc7942_0430  1-deoxy-D-xylulose-5-phosphate synthase  53.74 
 
 		 636 aa  668    Synechococcus elongatus PCC 7942  Bacteria  normal  0.620387  normal  0.394102 
 
 
-
 
NC_007614  Nmul_A0236  1-deoxy-D-xylulose-5-phosphate synthase  51.3 
 
 		 614 aa  652    Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.947213  n/a   
 
 
-
 
NC_012918  GM21_0883  1-deoxy-D-xylulose-5-phosphate synthase  58.86 
 
 		 635 aa  746    Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.0000000207097 
 
 
-
 
NC_011772  BCG9842_B0947  1-deoxy-D-xylulose-5-phosphate synthase  56.73 
 
 		 630 aa  719    Bacillus cereus G9842  Bacteria  decreased coverage  0.0000059556  decreased coverage  0.0000085811 
 
 
-
 
NC_007644  Moth_1511  1-deoxy-D-xylulose-5-phosphate synthase  62.82 
 
 		 640 aa  800    Moorella thermoacetica ATCC 39073  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010001  Cphy_2511  deoxyxylulose-5-phosphate synthase  51.71 
 
 		 625 aa  643    Clostridium phytofermentans ISDg  Bacteria  normal  0.465086  n/a   
 
 
-
 
NC_007760  Adeh_1097  1-deoxy-D-xylulose-5-phosphate synthase  52.78 
 
 		 636 aa  643    Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.124796  n/a   
 
 
-
 
NC_011883  Ddes_0956  1-deoxy-D-xylulose-5-phosphate synthase  53.22 
 
 		 644 aa  650    Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.246357  n/a   
 
 
-
 
NC_013525  Tter_1852  deoxyxylulose-5-phosphate synthase  56.13 
 
 		 640 aa  710    Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_010814  Glov_2235  1-deoxy-D-xylulose-5-phosphate synthase  59.19 
 
 		 622 aa  771    Geobacter lovleyi SZ  Bacteria  normal  0.77755  n/a   
 
 
-
 
NC_009667  Oant_0547  1-deoxy-D-xylulose-5-phosphate synthase  52.32 
 
 		 638 aa  640    Ochrobactrum anthropi ATCC 49188  Bacteria  normal  1  n/a   
 
 
-
 
NC_011891  A2cp1_1225  deoxyxylulose-5-phosphate synthase  53.36 
 
 		 636 aa  645    Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009253  Dred_1078  deoxyxylulose-5-phosphate synthase  100 
 
 		 635 aa  1298    Desulfotomaculum reducens MI-1  Bacteria  normal  0.0303047  n/a   
 
 
-
 
NC_007925  RPC_1149  1-deoxy-D-xylulose-5-phosphate synthase  53.04 
 
 		 641 aa  636    Rhodopseudomonas palustris BisB18  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007947  Mfla_2133  1-deoxy-D-xylulose-5-phosphate synthase  51.79 
 
 		 614 aa  666    Methylobacillus flagellatus KT  Bacteria  hitchhiker  0.000520629  normal  1 
 
 
-
 
NC_011898  Ccel_1900  deoxyxylulose-5-phosphate synthase  55 
 
 		 623 aa  689    Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.00488607  n/a   
 
 
-
 
NC_010002  Daci_2242  1-deoxy-D-xylulose-5-phosphate synthase  52.57 
 
 		 638 aa  639    Delftia acidovorans SPH-1  Bacteria  normal  1  normal  0.0315294 
 
 
-
 
NC_013173  Dbac_0943  deoxyxylulose-5-phosphate synthase  56 
 
 		 635 aa  716    Desulfomicrobium baculatum DSM 4028  Bacteria  normal  1  n/a   
 
 
-
 
NC_010424  Daud_1027  deoxyxylulose-5-phosphate synthase  65.18 
 
 		 634 aa  852    Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  1  n/a   
 
 
-
 
NC_013216  Dtox_2584  deoxyxylulose-5-phosphate synthase  65.53 
 
 		 633 aa  845    Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.931562  normal  0.224926 
 
 
-
 
NC_009483  Gura_1018  1-deoxy-D-xylulose-5-phosphate synthase  60.68 
 
 		 637 aa  754    Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_011899  Hore_06530  deoxyxylulose-5-phosphate synthase  59.32 
 
 		 636 aa  778    Halothermothrix orenii H 168  Bacteria  hitchhiker  0.0000000000553997  n/a   
 
 
-
 
NC_009428  Rsph17025_2792  1-deoxy-D-xylulose-5-phosphate synthase  53.07 
 
 		 637 aa  637    Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.250893  normal  1 
 
 
-
 
NC_008816  A9601_09541  1-deoxy-D-xylulose-5-phosphate synthase  50.32 
 
 		 629 aa  649    Prochlorococcus marinus str. AS9601  Bacteria  normal  0.277651  n/a   
 
 
-
 
NC_011126  HY04AAS1_1061  1-deoxy-D-xylulose-5-phosphate synthase  51.7 
 
 		 627 aa  652    Hydrogenobaculum sp. Y04AAS1  Bacteria  hitchhiker  0.00520521  n/a   
 
 
-
 
NC_011146  Gbem_1258  1-deoxy-D-xylulose-5-phosphate synthase  57.84 
 
 		 646 aa  744    Geobacter bemidjiensis Bem  Bacteria  normal  0.260207  n/a   
 
 
-
 
NC_011145  AnaeK_1157  deoxyxylulose-5-phosphate synthase  53.19 
 
 		 636 aa  644    Anaeromyxobacter sp. K  Bacteria  normal  1  n/a   
 
 
-
 
NC_009485  BBta_2479  1-deoxy-D-xylulose-5-phosphate synthase  52.48 
 
 		 641 aa  646    Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008254  Meso_0735  1-deoxy-D-xylulose-5-phosphate synthase  51.77 
 
 		 650 aa  639    Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013161  Cyan8802_0484  1-deoxy-D-xylulose-5-phosphate synthase  54.74 
 
 		 636 aa  681    Cyanothece sp. PCC 8802  Bacteria  normal  0.0190528  normal  1 
 
 
-
 
NC_008261  CPF_2073  1-deoxy-D-xylulose-5-phosphate synthase  51.7 
 
 		 619 aa  651    Clostridium perfringens ATCC 13124  Bacteria  normal  0.763377  n/a   
 
 
-
 
NC_008262  CPR_1787  1-deoxy-D-xylulose-5-phosphate synthase  51.86 
 
 		 619 aa  652    Clostridium perfringens SM101  Bacteria  normal  1  n/a   
 
 
-
 
NC_013223  Dret_1758  deoxyxylulose-5-phosphate synthase  55.75 
 
 		 633 aa  696    Desulfohalobium retbaense DSM 5692  Bacteria  normal  1  normal  0.805776 
 
 
-
 
NC_008312  Tery_3042  1-deoxy-D-xylulose-5-phosphate synthase  52.65 
 
 		 635 aa  659    Trichodesmium erythraeum IMS101  Bacteria  normal  1  hitchhiker  0.00899541 
 
 
-
 
NC_009455  DehaBAV1_0675  1-deoxy-D-xylulose-5-phosphate synthase  52.5 
 
 		 633 aa  667    Dehalococcoides sp. BAV1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011884  Cyan7425_4130  1-deoxy-D-xylulose-5-phosphate synthase  55.38 
 
 		 632 aa  685    Cyanothece sp. PCC 7425  Bacteria  hitchhiker  0.000139923  normal  1 
 
 
-
 
NC_009012  Cthe_0828  1-deoxy-D-xylulose-5-phosphate synthase  55.54 
 
 		 627 aa  692    Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_008346  Swol_0582  deoxyxylulose-5-phosphate synthase  57.12 
 
 		 638 aa  743    Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  1  n/a   
 
 
-
 
NC_012793  GWCH70_2319  1-deoxy-D-xylulose-5-phosphate synthase  59.02 
 
 		 630 aa  738    Geobacillus sp. WCH70  Bacteria  normal  1  n/a   
 
 
-
 
NC_010184  BcerKBAB4_4029  1-deoxy-D-xylulose-5-phosphate synthase  56.24 
 
 		 630 aa  715    Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.000105298  n/a   
 
 
-
 
NC_011729  PCC7424_4569  1-deoxy-D-xylulose-5-phosphate synthase  53.95 
 
 		 635 aa  665    Cyanothece sp. PCC 7424  Bacteria  n/a    normal  1 
 
 
-
 
NC_014248  Aazo_4395  deoxyxylulose-5-phosphate synthase  54.46 
 
 		 635 aa  683    'Nostoc azollae' 0708  Bacteria  normal  0.326234  n/a   
 
 
-
 
NC_008554  Sfum_1418  deoxyxylulose-5-phosphate synthase  59.42 
 
 		 646 aa  783    Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.793105  normal  0.333041 
 
 
-
 
NC_008576  Mmc1_1048  1-deoxy-D-xylulose-5-phosphate synthase  52.5 
 
 		 622 aa  650    Magnetococcus sp. MC-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011773  BCAH820_4197  1-deoxy-D-xylulose-5-phosphate synthase  56.73 
 
 		 630 aa  719    Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.9666000000000002e-33 
 
 
-
 
NC_011726  PCC8801_0471  1-deoxy-D-xylulose-5-phosphate synthase  54.74 
 
 		 636 aa  681    Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_008609  Ppro_1191  1-deoxy-D-xylulose-5-phosphate synthase  58.85 
 
 		 624 aa  729    Pelobacter propionicus DSM 2379  Bacteria  normal  1  n/a   
 
 
-
 
NC_008609  Ppro_2403  1-deoxy-D-xylulose-5-phosphate synthase  56.96 
 
 		 626 aa  728    Pelobacter propionicus DSM 2379  Bacteria  normal  1  n/a   
 
 
-
 
NC_013411  GYMC61_0251  1-deoxy-D-xylulose-5-phosphate synthase  58.83 
 
 		 631 aa  736    Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008819  NATL1_09721  1-deoxy-D-xylulose-5-phosphate synthase  52.57 
 
 		 628 aa  645    Prochlorococcus marinus str. NATL1A  Bacteria  normal  1  normal  0.274515 
 
 
-
 
NC_009091  P9301_09521  1-deoxy-D-xylulose-5-phosphate synthase  50.32 
 
 		 629 aa  647    Prochlorococcus marinus str. MIT 9301  Bacteria  normal  1  n/a   
 
 
-
 
NC_010718  Nther_1694  1-Deoxy-D-xylulose-5-phosphate synthase  59.58 
 
 		 631 aa  783    Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.134316  normal  0.0277937 
 
 
-
 
NC_008751  Dvul_1718  1-deoxy-D-xylulose-5-phosphate synthase  54.28 
 
 		 641 aa  673    Desulfovibrio vulgaris DP4  Bacteria  normal  0.0789997  normal  0.8348 
 
 
-
 
NC_002977  MCA0817  1-deoxy-D-xylulose-5-phosphate synthase  52.27 
 
 		 639 aa  634  1e-180  Methylococcus capsulatus str. Bath  Bacteria  normal  0.64849  n/a   
 
 
-
 
NC_009049  Rsph17029_2795  1-deoxy-D-xylulose-5-phosphate synthase  52.75 
 
 		 637 aa  634  1e-180  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009719  Plav_0781  1-deoxy-D-xylulose-5-phosphate synthase  51.85 
 
 		 650 aa  633  1e-180  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.128474  normal  0.356919 
 
 
-
 
NC_008752  Aave_2015  1-deoxy-D-xylulose-5-phosphate synthase  50.97 
 
 		 622 aa  632  1e-180  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0928222  hitchhiker  0.00382162 
 
 
-
 
NC_007948  Bpro_1747  1-deoxy-D-xylulose-5-phosphate synthase  52.27 
 
 		 635 aa  633  1e-180  Polaromonas sp. JS666  Bacteria  normal  1  normal  0.123274 
 
 
-
 
NC_008825  Mpe_A2631  1-deoxy-D-xylulose-5-phosphate synthase  50.4 
 
 		 631 aa  632  1e-180  Methylibium petroleiphilum PM1  Bacteria  normal  0.898306  normal  1 
 
 
-
 
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