13 homologs were found in PanDaTox collection
for query gene Dole_1901 on replicon NC_009943
Organism: Desulfococcus oleovorans Hxd3



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009943  Dole_1901  prevent-host-death family protein  100 
 
 
78 aa  158  2e-38  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00389172  n/a   
 
 
-
 
NC_008781  Pnap_0061  prevent-host-death family protein  48.72 
 
 
93 aa  74.7  3e-13  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.933415  normal  0.536193 
 
 
-
 
NC_011761  AFE_0085  prevent-host-death family protein  52.7 
 
 
73 aa  70.9  6e-12  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_011206  Lferr_0087  prevent-host-death family protein  52.7 
 
 
73 aa  70.9  6e-12  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.393506  normal 
 
 
-
 
NC_011901  Tgr7_1315  prevent-host-death family protein  37.31 
 
 
78 aa  46.2  0.0001  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.147155  n/a   
 
 
-
 
NC_010338  Caul_3054  prevent-host-death family protein  38.03 
 
 
91 aa  45.8  0.0002  Caulobacter sp. K31  Bacteria  normal  0.326995  normal 
 
 
-
 
NC_009664  Krad_0355  hypothetical protein  40 
 
 
108 aa  45.4  0.0003  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.659546  normal 
 
 
-
 
NC_011662  Tmz1t_2929  prevent-host-death family protein  48.84 
 
 
83 aa  45.1  0.0003  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_007604  Synpcc7942_1204  prevent-host-death protein  42.22 
 
 
104 aa  42  0.002  Synechococcus elongatus PCC 7942  Bacteria  normal  0.760052  normal 
 
 
-
 
NC_013530  Xcel_2619  prevent-host-death family protein  41.86 
 
 
88 aa  41.6  0.003  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_1056  hypothetical protein  32 
 
 
105 aa  41.2  0.005  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.809655  normal  0.691667 
 
 
-
 
NC_011004  Rpal_2038  prevent-host-death family protein  45.24 
 
 
85 aa  40.8  0.006  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1782  prevent-host-death family protein  32.89 
 
 
78 aa  40.8  0.007  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>