More than 300 homologs were found in PanDaTox collection
for query gene Dole_1341 on replicon NC_009943
Organism: Desulfococcus oleovorans Hxd3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009943  Dole_1341  response regulator receiver protein  100 
 
 
301 aa  622  1e-177  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2034  response regulator receiver protein  41.02 
 
 
300 aa  232  7.000000000000001e-60  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_011883  Ddes_0816  response regulator receiver protein  47.41 
 
 
157 aa  107  3e-22  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1357  response regulator receiver protein  45.67 
 
 
144 aa  106  5e-22  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.48275  n/a   
 
 
-
 
NC_009943  Dole_1350  response regulator receiver protein  41.67 
 
 
147 aa  103  3e-21  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00189482  n/a   
 
 
-
 
NC_008751  Dvul_2827  response regulator receiver protein  44.35 
 
 
137 aa  103  4e-21  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_0618  response regulator receiver protein  45.45 
 
 
157 aa  102  9e-21  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_0648  response regulator receiver protein  39.71 
 
 
151 aa  102  9e-21  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_0656  response regulator receiver protein  45.3 
 
 
129 aa  102  9e-21  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.663964  normal 
 
 
-
 
NC_009943  Dole_1347  response regulator receiver protein  46.09 
 
 
688 aa  101  2e-20  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_1988  response regulator receiver protein  45.3 
 
 
119 aa  98.2  1e-19  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_008751  Dvul_0173  response regulator receiver protein  42.98 
 
 
121 aa  97.8  2e-19  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_1807  response regulator receiver protein  43.8 
 
 
139 aa  96.7  4e-19  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_0314  response regulator receiver protein  42.96 
 
 
131 aa  96.3  5e-19  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0234873  n/a   
 
 
-
 
NC_011769  DvMF_2334  response regulator receiver protein  42.5 
 
 
151 aa  96.3  6e-19  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_013173  Dbac_2042  response regulator receiver protein  41.67 
 
 
147 aa  95.5  9e-19  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2035  response regulator receiver protein  40 
 
 
129 aa  94.4  2e-18  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1362  response regulator receiver protein  38.13 
 
 
159 aa  94.4  2e-18  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_0435  response regulator receiver protein  38.98 
 
 
124 aa  94.7  2e-18  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.00876892  n/a   
 
 
-
 
NC_011769  DvMF_1772  response regulator receiver protein  44.07 
 
 
151 aa  94.4  2e-18  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_008554  Sfum_0636  response regulator receiver protein  44.35 
 
 
124 aa  94  3e-18  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.621219  normal 
 
 
-
 
NC_009943  Dole_2739  two component, sigma54 specific, Fis family transcriptional regulator  45.76 
 
 
451 aa  93.2  5e-18  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.693002  n/a   
 
 
-
 
NC_009943  Dole_1361  response regulator receiver protein  46.09 
 
 
147 aa  92.8  6e-18  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_1797  two component, sigma54 specific, transcriptional regulator, Fis family  36.42 
 
 
461 aa  91.7  1e-17  Rhodothermus marinus DSM 4252  Bacteria  normal  0.774224  n/a   
 
 
-
 
NC_009943  Dole_1351  response regulator receiver protein  42.31 
 
 
141 aa  91.3  2e-17  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000171187  n/a   
 
 
-
 
NC_009943  Dole_1360  response regulator receiver sensor signal transduction histidine kinase  42.86 
 
 
403 aa  91.3  2e-17  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2679  response regulator receiver domain-containing protein  39.66 
 
 
129 aa  91.3  2e-17  Geobacter metallireducens GS-15  Bacteria  normal  0.380915  normal  0.27601 
 
 
-
 
NC_008554  Sfum_0620  response regulator receiver protein  39.26 
 
 
142 aa  91.3  2e-17  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_011883  Ddes_0018  response regulator receiver protein  42.11 
 
 
135 aa  90.9  2e-17  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  decreased coverage  0.00000218096  n/a   
 
 
-
 
NC_008554  Sfum_0633  response regulator receiver protein  36.89 
 
 
133 aa  89.7  5e-17  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.546392  normal 
 
 
-
 
NC_009675  Anae109_0965  two component, sigma54 specific, Fis family transcriptional regulator  42.48 
 
 
466 aa  89.7  5e-17  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.605384  normal 
 
 
-
 
NC_008751  Dvul_0404  response regulator receiver protein  42.37 
 
 
151 aa  89.7  5e-17  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.134088 
 
 
-
 
NC_009943  Dole_1358  response regulator receiver protein  38.21 
 
 
144 aa  89.7  6e-17  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.107991  n/a   
 
 
-
 
NC_011353  ECH74115_5475  transcriptional regulatory protein ZraR  38.14 
 
 
441 aa  89.4  7e-17  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
CP001509  ECD_03881  fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator/sigma54 interaction protein  38.14 
 
 
441 aa  89  9e-17  Escherichia coli BL21(DE3)  Bacteria  normal  0.0124745  n/a   
 
 
-
 
NC_010468  EcolC_4021  transcriptional regulatory protein ZraR  38.14 
 
 
441 aa  89  9e-17  Escherichia coli ATCC 8739  Bacteria  normal  0.0128092  normal  0.0227655 
 
 
-
 
NC_012892  B21_03834  hypothetical protein  38.14 
 
 
441 aa  89  9e-17  Escherichia coli BL21  Bacteria  normal  0.0118236  n/a   
 
 
-
 
NC_011830  Dhaf_4779  two component, sigma54 specific, transcriptional regulator, Fis family  40.87 
 
 
494 aa  89  1e-16  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_011083  SeHA_C4505  transcriptional regulatory protein ZraR  38.79 
 
 
441 aa  88.2  1e-16  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal  0.11324 
 
 
-
 
NC_007519  Dde_0692  response regulator receiver domain-containing protein  35.25 
 
 
145 aa  88.6  1e-16  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  decreased coverage  0.000176776  n/a   
 
 
-
 
NC_007760  Adeh_0922  two component, sigma54 specific, Fis family transcriptional regulator  40.71 
 
 
462 aa  88.6  1e-16  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.554455  n/a   
 
 
-
 
NC_013440  Hoch_2510  two component, sigma54 specific, transcriptional regulator, Fis family  37.61 
 
 
472 aa  88.2  1e-16  Haliangium ochraceum DSM 14365  Bacteria  normal  0.0791346  normal 
 
 
-
 
NC_011145  AnaeK_0978  two component, sigma54 specific, transcriptional regulator, Fis family  40.71 
 
 
466 aa  88.2  1e-16  Anaeromyxobacter sp. K  Bacteria  normal  0.0932912  n/a   
 
 
-
 
NC_011891  A2cp1_0976  two component, sigma54 specific, transcriptional regulator, Fis family  40.71 
 
 
1079 aa  87.8  2e-16  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_3989  two component, sigma54 specific, transcriptional regulator, Fis family  37.29 
 
 
441 aa  87  3e-16  Escherichia coli DH1  Bacteria  normal  0.716922  n/a   
 
 
-
 
NC_010814  Glov_2245  two component, sigma54 specific, transcriptional regulator, Fis family  37.82 
 
 
460 aa  87.4  3e-16  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_2366  two component, sigma54 specific, Fis family transcriptional regulator  37.19 
 
 
385 aa  87.4  3e-16  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.0000342445  n/a   
 
 
-
 
NC_009800  EcHS_A4238  transcriptional regulatory protein ZraR  37.29 
 
 
441 aa  87  3e-16  Escherichia coli HS  Bacteria  normal  0.020936  n/a   
 
 
-
 
NC_009943  Dole_1352  response regulator receiver protein  41.79 
 
 
139 aa  87  3e-16  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00001959  n/a   
 
 
-
 
NC_010498  EcSMS35_4454  transcriptional regulatory protein ZraR  37.29 
 
 
441 aa  87.4  3e-16  Escherichia coli SMS-3-5  Bacteria  normal  0.209341  hitchhiker  0.000519331 
 
 
-
 
NC_008554  Sfum_0654  response regulator receiver protein  38.21 
 
 
413 aa  87  3e-16  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.113697  normal 
 
 
-
 
NC_013216  Dtox_2959  two component, sigma54 specific, transcriptional regulator, Fis family  35.21 
 
 
513 aa  87  3e-16  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_010658  SbBS512_E4497  transcriptional regulatory protein ZraR  37.29 
 
 
441 aa  87  3e-16  Shigella boydii CDC 3083-94  Bacteria  hitchhiker  0.0000279415  n/a   
 
 
-
 
NC_002939  GSU1117  response regulator  37.93 
 
 
127 aa  87  4e-16  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011205  SeD_A4581  transcriptional regulatory protein ZraR  37.93 
 
 
441 aa  86.7  4e-16  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_0313  response regulator receiver protein  38.52 
 
 
143 aa  86.7  4e-16  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0254543  n/a   
 
 
-
 
NC_009943  Dole_2335  response regulator receiver protein  37.7 
 
 
411 aa  87  4e-16  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.0000388714  n/a   
 
 
-
 
NC_011145  AnaeK_1635  two component, sigma54 specific, transcriptional regulator, Fis family  37.98 
 
 
463 aa  86.7  4e-16  Anaeromyxobacter sp. K  Bacteria  normal  0.0346405  n/a   
 
 
-
 
NC_008554  Sfum_0632  response regulator receiver protein  38.46 
 
 
135 aa  86.7  4e-16  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_3098  two component, sigma54 specific, transcriptional regulator, Fis family  34.38 
 
 
491 aa  86.7  4e-16  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011094  SeSA_A4385  transcriptional regulatory protein ZraR  37.93 
 
 
441 aa  86.7  4e-16  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal  0.712665 
 
 
-
 
NC_009801  EcE24377A_4549  transcriptional regulatory protein ZraR  37.29 
 
 
441 aa  87  4e-16  Escherichia coli E24377A  Bacteria  hitchhiker  0.000369022  n/a   
 
 
-
 
NC_008751  Dvul_0407  response regulator receiver protein  40.87 
 
 
128 aa  86.7  4e-16  Desulfovibrio vulgaris DP4  Bacteria  normal  0.627834  normal  0.12665 
 
 
-
 
NC_007760  Adeh_2239  two component, sigma54 specific, Fis family transcriptional regulator  37.98 
 
 
466 aa  86.3  5e-16  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_1708  two component, sigma54 specific, transcriptional regulator, Fis family  37.98 
 
 
463 aa  86.7  5e-16  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011080  SNSL254_A4507  transcriptional regulatory protein ZraR  37.93 
 
 
441 aa  86.7  5e-16  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal  0.0570238 
 
 
-
 
NC_007519  Dde_0321  response regulator receiver domain-containing protein  40 
 
 
122 aa  86.3  6e-16  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1348  response regulator receiver protein  37.01 
 
 
173 aa  85.9  7e-16  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1694  two component, sigma54 specific, transcriptional regulator, Fis family  30.43 
 
 
472 aa  85.9  7e-16  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_0911  two component, sigma54 specific, Fis family transcriptional regulator  34.35 
 
 
456 aa  85.9  7e-16  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_1055  two component, sigma54 specific, Fis family transcriptional regulator  34.35 
 
 
456 aa  85.9  7e-16  Methylobacillus flagellatus KT  Bacteria  normal  0.523432  normal 
 
 
-
 
NC_009783  VIBHAR_02959  hypothetical protein  33.33 
 
 
467 aa  85.9  8e-16  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013173  Dbac_2037  response regulator receiver protein  40.35 
 
 
120 aa  85.9  8e-16  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_0324  response regulator receiver domain-containing protein  43.36 
 
 
127 aa  85.5  9e-16  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.581793  n/a   
 
 
-
 
NC_013456  VEA_002951  regulatory protein LuxO  33.33 
 
 
468 aa  85.5  0.000000000000001  Vibrio sp. Ex25  Bacteria  normal  0.0508152  n/a   
 
 
-
 
NC_007519  Dde_1685  two component Fis family transcriptional regulator  39.13 
 
 
457 aa  85.5  0.000000000000001  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  hitchhiker  0.00529377  n/a   
 
 
-
 
NC_011149  SeAg_B4418  transcriptional regulatory protein ZraR  37.07 
 
 
441 aa  85.5  0.000000000000001  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.298897  n/a   
 
 
-
 
NC_008609  Ppro_0710  two component, sigma54 specific, Fis family transcriptional regulator  35.88 
 
 
456 aa  85.1  0.000000000000001  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_2709  response regulator receiver sensor signal transduction histidine kinase  41.74 
 
 
501 aa  85.1  0.000000000000001  Desulfovibrio vulgaris DP4  Bacteria  normal  0.710197  normal  0.745824 
 
 
-
 
NC_002939  GSU2915  sigma-54 dependent DNA-binding response regulator  37.39 
 
 
457 aa  84.3  0.000000000000002  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_2625  two component transcriptional regulator  32.74 
 
 
232 aa  84.3  0.000000000000002  Marinomonas sp. MWYL1  Bacteria  normal  unclonable  0.00000000000561273 
 
 
-
 
NC_009675  Anae109_3404  two component, sigma54 specific, Fis family transcriptional regulator  40 
 
 
455 aa  84.3  0.000000000000002  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.235439  normal  0.675632 
 
 
-
 
NC_011369  Rleg2_3169  two component, sigma54 specific, transcriptional regulator, Fis family  37.23 
 
 
444 aa  84.3  0.000000000000002  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.254755  normal  0.187976 
 
 
-
 
NC_007498  Pcar_2345  two component signal transduction response regulator  31.52 
 
 
455 aa  84.3  0.000000000000002  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00459366  n/a   
 
 
-
 
NC_009675  Anae109_2258  two component, sigma54 specific, Fis family transcriptional regulator  38.46 
 
 
468 aa  84.7  0.000000000000002  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.428008  normal  0.0222917 
 
 
-
 
NC_013132  Cpin_6438  putative two component, sigma54 specific, transcriptional regulator, Fis family  31.4 
 
 
394 aa  84.7  0.000000000000002  Chitinophaga pinensis DSM 2588  Bacteria  decreased coverage  0.00615091  normal  0.383003 
 
 
-
 
NC_013173  Dbac_2271  response regulator receiver protein  36.92 
 
 
127 aa  84.7  0.000000000000002  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.420434  n/a   
 
 
-
 
NC_013216  Dtox_0970  two component, sigma54 specific, transcriptional regulator, Fis family  38.79 
 
 
459 aa  84.3  0.000000000000002  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.000694494  normal  0.524712 
 
 
-
 
NC_011899  Hore_10620  response regulator receiver protein  38.14 
 
 
122 aa  84  0.000000000000003  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.00212992  n/a   
 
 
-
 
NC_011145  AnaeK_2310  two component, sigma54 specific, transcriptional regulator, Fis family  37.69 
 
 
469 aa  84  0.000000000000003  Anaeromyxobacter sp. K  Bacteria  normal  0.294968  n/a   
 
 
-
 
NC_011769  DvMF_1461  two component, sigma54 specific, transcriptional regulator, Fis family  33.6 
 
 
491 aa  84.3  0.000000000000003  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.750458 
 
 
-
 
NC_007517  Gmet_2924  two component, sigma54 specific, Fis family transcriptional regulator  30.61 
 
 
470 aa  83.6  0.000000000000003  Geobacter metallireducens GS-15  Bacteria  normal  0.777319  hitchhiker  0.0000000000564278 
 
 
-
 
NC_009253  Dred_2001  two component, sigma54 specific, Fis family transcriptional regulator  37.39 
 
 
454 aa  84  0.000000000000003  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_011312  VSAL_I1874  two component signal response regulator LuxO  41.23 
 
 
469 aa  84  0.000000000000003  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.0317984  n/a   
 
 
-
 
NC_011891  A2cp1_2398  two component, sigma54 specific, transcriptional regulator, Fis family  37.69 
 
 
469 aa  83.6  0.000000000000003  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.313034  n/a   
 
 
-
 
NC_013205  Aaci_2784  response regulator receiver protein  38.94 
 
 
125 aa  84  0.000000000000003  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.0945133  n/a   
 
 
-
 
NC_008751  Dvul_1657  two component, sigma54 specific, Fis family transcriptional regulator  40.35 
 
 
459 aa  84  0.000000000000003  Desulfovibrio vulgaris DP4  Bacteria  hitchhiker  0.000574549  normal  0.302016 
 
 
-
 
NC_009012  Cthe_0583  response regulator receiver protein  37.96 
 
 
394 aa  83.6  0.000000000000003  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_4388  DNA-binding response regulator  36.29 
 
 
227 aa  83.6  0.000000000000004  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007760  Adeh_1555  two component, sigma54 specific, Fis family transcriptional regulator  37.69 
 
 
467 aa  83.6  0.000000000000004  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.21045  n/a   
 
 
-
 
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