13 homologs were found in PanDaTox collection
for query gene Dole_0060 on replicon NC_009943
Organism: Desulfococcus oleovorans Hxd3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009943  Dole_0060  vitamin B12 dependent methionine synthase activation region  100 
 
 
242 aa  493  1e-138  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_2962  vitamin B12 dependent methionine synthase activation region  38.12 
 
 
250 aa  109  3e-23  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.15104  n/a   
 
 
-
 
NC_013517  Sterm_3080  Vitamin B12 dependent methionine synthase activation region  27.15 
 
 
225 aa  57  3e-07  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_0730  vitamin B12 dependent methionine synthase, activation region  33.65 
 
 
178 aa  55.8  6e-07  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_3878  Vitamin B12 dependent methionine synthase activation region  25.74 
 
 
236 aa  52  8e-06  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_013165  Shel_23500  vitamin B12 dependent methionine synthase  31.3 
 
 
225 aa  50.8  2e-05  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.730833  hitchhiker  3.0345e-05 
 
 
-
 
NC_009486  Tpet_0655  vitamin B12 dependent methionine synthase, activation region  33.64 
 
 
202 aa  51.2  2e-05  Thermotoga petrophila RKU-1  Bacteria  normal  0.766498  n/a   
 
 
-
 
NC_010483  TRQ2_0679  vitamin B12 dependent methionine synthase activation region  33.64 
 
 
202 aa  50.8  2e-05  Thermotoga sp. RQ2  Bacteria  normal  0.59696  n/a   
 
 
-
 
NC_011899  Hore_15340  Vitamin B12 dependent methionine synthase, activation domain protein  24.21 
 
 
239 aa  48.1  0.0001  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_0644  vitamin B12 dependent methionine synthase, activation region  30.85 
 
 
214 aa  45.1  0.001  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_4340  hypothetical protein  28.57 
 
 
453 aa  43.1  0.004  Opitutus terrae PB90-1  Bacteria  normal  0.494499  normal 
 
 
-
 
NC_009253  Dred_2208  vitamin B12 dependent methionine synthase, activation region  26.56 
 
 
218 aa  43.1  0.004  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.000120286  n/a   
 
 
-
 
NC_010003  Pmob_1791  vitamin B12 dependent methionine synthase, activation region  25.24 
 
 
173 aa  43.1  0.004  Petrotoga mobilis SJ95  Bacteria  normal  0.595123  n/a   
 
 
-
 
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