More than 300 homologs were found in PanDaTox collection
for query gene Dole_0049 on replicon NC_009943
Organism: Desulfococcus oleovorans Hxd3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009943  Dole_0049  response regulator receiver protein  100 
 
 
226 aa  459  1e-128  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1977  response regulator receiver protein  32 
 
 
265 aa  114  8e-25  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1938  response regulator receiver protein  31.86 
 
 
244 aa  114  1e-24  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_1260  response regulator receiver protein  32.59 
 
 
331 aa  106  3e-22  Meiothermus ruber DSM 1279  Bacteria  normal  0.208704  normal 
 
 
-
 
NC_013440  Hoch_6827  response regulator receiver protein  28.82 
 
 
389 aa  92.8  4e-18  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_007912  Sde_3800  response regulator receiver domain-containing protein  31.4 
 
 
488 aa  77.8  1e-13  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A0691  signal transduction protein  31.93 
 
 
388 aa  75.5  6e-13  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_0970  response regulator receiver  28.33 
 
 
438 aa  74.7  1e-12  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_2942  response regulator  34.17 
 
 
456 aa  74.3  1e-12  Pseudomonas putida KT2440  Bacteria  normal  0.714666  normal  0.271158 
 
 
-
 
NC_007492  Pfl01_4550  response regulator receiver domain-containing protein  30.58 
 
 
451 aa  74.7  1e-12  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.01769  normal 
 
 
-
 
NC_009512  Pput_2745  response regulator receiver protein  34.17 
 
 
456 aa  74.3  2e-12  Pseudomonas putida F1  Bacteria  normal  0.862781  normal 
 
 
-
 
NC_009943  Dole_1048  response regulator receiver protein  24 
 
 
814 aa  72.8  4e-12  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_007650  BTH_II0731  response regulator  31.67 
 
 
476 aa  72.4  5e-12  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_0638  two component, sigma54 specific, Fis family transcriptional regulator  32.23 
 
 
453 aa  72  7e-12  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_2368  putative signal transduction protein  31.58 
 
 
403 aa  71.6  8e-12  Actinosynnema mirum DSM 43827  Bacteria  normal  0.374822  n/a   
 
 
-
 
NC_007512  Plut_0891  response regulator receiver domain-containing protein  29.66 
 
 
137 aa  71.6  9e-12  Chlorobium luteolum DSM 273  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_4444  response regulator receiver modulated metal dependent phosphohydrolase  31.67 
 
 
526 aa  71.2  1e-11  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_007509  Bcep18194_C7223  response regulator receiver modulated metal dependent phosphohydrolase  33.61 
 
 
473 aa  70.9  2e-11  Burkholderia sp. 383  Bacteria  normal  0.58817  normal  0.218696 
 
 
-
 
NC_007435  BURPS1710b_A0711  response regulator  30.83 
 
 
518 aa  70.5  2e-11  Burkholderia pseudomallei 1710b  Bacteria  normal  0.226782  n/a   
 
 
-
 
NC_011145  AnaeK_0313  two component, sigma54 specific, transcriptional regulator, Fis family  36.19 
 
 
465 aa  70.9  2e-11  Anaeromyxobacter sp. K  Bacteria  normal  0.0494225  n/a   
 
 
-
 
NC_011891  A2cp1_0324  two component, sigma54 specific, transcriptional regulator, Fis family  36.19 
 
 
465 aa  70.9  2e-11  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.266606  n/a   
 
 
-
 
NC_006349  BMAA1662  response regulator  30.83 
 
 
475 aa  69.7  3e-11  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A0599  response regulator  30.83 
 
 
475 aa  69.7  3e-11  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_2442  two component, sigma54 specific, Fis family transcriptional regulator  26.63 
 
 
441 aa  69.7  3e-11  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_008835  BMA10229_1923  response regulator  30.83 
 
 
475 aa  69.7  3e-11  Burkholderia mallei NCTC 10229  Bacteria  normal  0.537818  n/a   
 
 
-
 
NC_009075  BURPS668_A2314  response regulator  30.83 
 
 
475 aa  70.1  3e-11  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_008784  BMASAVP1_1716  response regulator  30.83 
 
 
475 aa  69.7  3e-11  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A2231  response regulator  30.83 
 
 
475 aa  69.3  4e-11  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_2726  putative signal transduction protein  31.9 
 
 
365 aa  69.7  4e-11  Dickeya dadantii Ech703  Bacteria  normal  0.279031  n/a   
 
 
-
 
NC_008751  Dvul_2652  response regulator receiver modulated metal dependent phosphohydrolase  30.83 
 
 
412 aa  69.3  4e-11  Desulfovibrio vulgaris DP4  Bacteria  normal  0.5401  normal 
 
 
-
 
NC_011146  Gbem_3634  response regulator receiver sensor signal transduction histidine kinase  32.76 
 
 
379 aa  69.3  5e-11  Geobacter bemidjiensis Bem  Bacteria  normal  0.0261897  n/a   
 
 
-
 
NC_011138  MADE_03496  response regulator  31.36 
 
 
434 aa  68.9  6e-11  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_009667  Oant_2124  multi-sensor hybrid histidine kinase  34.43 
 
 
857 aa  68.9  7e-11  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.104313  n/a   
 
 
-
 
NC_009636  Smed_1525  multi-sensor hybrid histidine kinase  37.78 
 
 
872 aa  68.9  7e-11  Sinorhizobium medicae WSM419  Bacteria  normal  0.40409  normal 
 
 
-
 
NC_012918  GM21_3739  response regulator receiver sensor signal transduction histidine kinase  33.62 
 
 
379 aa  68.6  8e-11  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_012850  Rleg_2173  PAS/PAC sensor hybrid histidine kinase  39.77 
 
 
867 aa  68.2  9e-11  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  decreased coverage  0.00129243  normal  0.0294734 
 
 
-
 
NC_011891  A2cp1_2056  two component, sigma54 specific, transcriptional regulator, Fis family  32.79 
 
 
473 aa  68.2  1e-10  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.732718  n/a   
 
 
-
 
NC_011369  Rleg2_1961  multi-sensor hybrid histidine kinase  36.67 
 
 
867 aa  67.8  1e-10  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.126106 
 
 
-
 
NC_008783  BARBAKC583_0853  sensor histidine kinase/reponse regulator  39.77 
 
 
845 aa  68.2  1e-10  Bartonella bacilliformis KC583  Bacteria  decreased coverage  0.00134282  n/a   
 
 
-
 
NC_013173  Dbac_0318  two component, sigma54 specific, transcriptional regulator, Fis family  32.77 
 
 
444 aa  68.2  1e-10  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.623728  n/a   
 
 
-
 
NC_010512  Bcenmc03_6441  response regulator receiver modulated metal dependent phosphohydrolase  31.09 
 
 
470 aa  68.2  1e-10  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_011145  AnaeK_1971  two component, sigma54 specific, transcriptional regulator, Fis family  32.79 
 
 
473 aa  68.2  1e-10  Anaeromyxobacter sp. K  Bacteria  normal  0.0887215  n/a   
 
 
-
 
NC_009485  BBta_5491  cell cycle control histidine kinase CckA  33.33 
 
 
892 aa  67  2e-10  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.606378  normal 
 
 
-
 
NC_008228  Patl_1538  response regulator receiver modulated diguanylate phosphodiesterase  31.58 
 
 
563 aa  67  2e-10  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_008544  Bcen2424_5939  response regulator receiver modulated metal dependent phosphohydrolase  31.09 
 
 
472 aa  67.4  2e-10  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.862183 
 
 
-
 
NC_008062  Bcen_5575  response regulator receiver modulated metal dependent phosphohydrolase  31.09 
 
 
472 aa  67.4  2e-10  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_004310  BR1039  sensory box histidine kinase/response regulator  31.97 
 
 
945 aa  67.4  2e-10  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_1908  two component, sigma54 specific, Fis family transcriptional regulator  32.79 
 
 
473 aa  67.4  2e-10  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_1951  two component, sigma54 specific, Fis family transcriptional regulator  32.79 
 
 
470 aa  67  2e-10  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.516267  normal 
 
 
-
 
NC_007760  Adeh_0302  two component, sigma54 specific, Fis family transcriptional regulator  35.24 
 
 
465 aa  67  2e-10  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_009505  BOV_1004  sensory box histidine kinase/response regulator  31.97 
 
 
945 aa  67.4  2e-10  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_0504  two component, sigma54 specific, Fis family transcriptional regulator  33.33 
 
 
443 aa  66.6  3e-10  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_0680  two component, sigma54 specific, Fis family transcriptional regulator  35 
 
 
418 aa  66.6  3e-10  Opitutus terrae PB90-1  Bacteria  normal  0.736075  normal 
 
 
-
 
NC_002939  GSU1119  sensor histidine kinase/response regulator  35.59 
 
 
420 aa  66.2  4e-10  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_0533  two component, sigma54 specific, transcriptional regulator, Fis family  33.33 
 
 
443 aa  66.2  4e-10  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.141325  n/a   
 
 
-
 
NC_008554  Sfum_0621  two component, sigma54 specific, Fis family transcriptional regulator  33.33 
 
 
472 aa  66.2  4e-10  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_1166  two component, sigma54 specific, transcriptional regulator, Fis family  31.9 
 
 
447 aa  66.2  4e-10  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_0537  two component, sigma54 specific, transcriptional regulator, Fis family  33.33 
 
 
446 aa  66.2  4e-10  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_2331  response regulator receiver protein  35.59 
 
 
142 aa  65.9  5e-10  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  4.25244e-09  n/a   
 
 
-
 
NC_007964  Nham_1398  multi-sensor hybrid histidine kinase  35.04 
 
 
853 aa  65.5  6e-10  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1694  two component, sigma54 specific, transcriptional regulator, Fis family  31.36 
 
 
472 aa  65.5  6e-10  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_4257  two component, sigma54 specific, Fis family transcriptional regulator  33.33 
 
 
463 aa  65.5  6e-10  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_014150  Bmur_0931  response regulator receiver protein  33.04 
 
 
430 aa  65.5  6e-10  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_008392  Bamb_6276  response regulator receiver modulated metal dependent phosphohydrolase  28.57 
 
 
469 aa  65.1  7e-10  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_5532  PAS/PAC sensor hybrid histidine kinase  35.71 
 
 
890 aa  65.5  7e-10  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_3765  two component, sigma54 specific, Fis family transcriptional regulator  28.7 
 
 
463 aa  65.1  8e-10  Syntrophobacter fumaroxidans MPOB  Bacteria  decreased coverage  0.000821276  normal 
 
 
-
 
NC_011989  Avi_2463  two component sensor kinase  37.65 
 
 
872 aa  65.1  8e-10  Agrobacterium vitis S4  Bacteria  normal  0.899501  n/a   
 
 
-
 
NC_008554  Sfum_3268  two component, sigma54 specific, Fis family transcriptional regulator  34.17 
 
 
483 aa  65.1  8e-10  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.474695  normal 
 
 
-
 
NC_010571  Oter_0999  response regulator receiver modulated serine phosphatase  29.41 
 
 
602 aa  65.1  8e-10  Opitutus terrae PB90-1  Bacteria  normal  0.118416  hitchhiker  0.00369461 
 
 
-
 
NC_010557  BamMC406_5980  response regulator receiver modulated metal dependent phosphohydrolase  28.57 
 
 
469 aa  65.1  8e-10  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_2453  two component, sigma54 specific, Fis family transcriptional regulator  32.48 
 
 
461 aa  65.1  8e-10  Geobacter metallireducens GS-15  Bacteria  hitchhiker  1.96128e-05  normal 
 
 
-
 
NC_011891  A2cp1_2499  two component, sigma54 specific, transcriptional regulator, Fis family  32.23 
 
 
448 aa  64.7  1e-09  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.0553938  n/a   
 
 
-
 
NC_010505  Mrad2831_2229  multi-sensor hybrid histidine kinase  37.93 
 
 
925 aa  64.7  1e-09  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.843602  normal 
 
 
-
 
NC_010511  M446_5149  multi-sensor hybrid histidine kinase  36.9 
 
 
869 aa  64.3  1e-09  Methylobacterium sp. 4-46  Bacteria  normal  hitchhiker  0.00416194 
 
 
-
 
NC_011145  AnaeK_2412  two component, sigma54 specific, transcriptional regulator, Fis family  32.23 
 
 
448 aa  64.3  1e-09  Anaeromyxobacter sp. K  Bacteria  normal  0.408341  n/a   
 
 
-
 
NC_008312  Tery_0615  response regulator receiver sensor signal transduction histidine kinase  34.43 
 
 
395 aa  64.7  1e-09  Trichodesmium erythraeum IMS101  Bacteria  normal  hitchhiker  0.00858549 
 
 
-
 
NC_009483  Gura_0224  response regulator receiver sensor signal transduction histidine kinase  32.76 
 
 
379 aa  64.3  1e-09  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_4110  response regulator receiver protein  31.15 
 
 
126 aa  64.7  1e-09  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_4635  multi-sensor hybrid histidine kinase  30.58 
 
 
857 aa  64.7  1e-09  Xanthobacter autotrophicus Py2  Bacteria  normal  0.576155  normal  0.315346 
 
 
-
 
NC_014248  Aazo_2338  GAF sensor-containing adenylate/guanylate cyclase  31.97 
 
 
1180 aa  64.7  1e-09  'Nostoc azollae' 0708  Bacteria  normal  0.0263037  n/a   
 
 
-
 
NC_008254  Meso_1740  multi-sensor hybrid histidine kinase / cell cycle control histidine kinase CckA  30.89 
 
 
866 aa  64.3  1e-09  Chelativorans sp. BNC1  Bacteria  normal  0.0223971  n/a   
 
 
-
 
NC_007406  Nwi_1138  Signal transduction histidine kinase  34.19 
 
 
888 aa  64.3  1e-09  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.408537  normal 
 
 
-
 
NC_007760  Adeh_1450  two component, sigma54 specific, Fis family transcriptional regulator  32.23 
 
 
448 aa  64.7  1e-09  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_1534  response regulator receiver protein  29.91 
 
 
439 aa  64.7  1e-09  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_1524  multi-sensor hybrid histidine kinase  32.48 
 
 
853 aa  63.9  2e-09  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.334346 
 
 
-
 
NC_007498  Pcar_2145  two component signal transduction response regulator  28.81 
 
 
492 aa  63.5  2e-09  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_2023  two component, sigma54 specific, transcriptional regulator, Fis family  27.34 
 
 
473 aa  64.3  2e-09  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_0886  response regulator receiver protein  32.28 
 
 
207 aa  63.9  2e-09  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_2764  two component, sigma54 specific, Fis family transcriptional regulator  32.23 
 
 
466 aa  63.5  2e-09  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_0246  nitrogen metabolism transcriptional regulator, NtrC, Fis family  29.06 
 
 
469 aa  63.9  2e-09  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.487777  n/a   
 
 
-
 
NC_010424  Daud_0677  response regulator receiver modulated metal dependent phosphohydrolase  29.61 
 
 
343 aa  63.9  2e-09  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.756866  n/a   
 
 
-
 
NC_009943  Dole_1777  two component, sigma54 specific, Fis family transcriptional regulator  26.05 
 
 
465 aa  63.9  2e-09  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_014150  Bmur_2539  response regulator receiver protein  27.35 
 
 
130 aa  63.5  3e-09  Brachyspira murdochii DSM 12563  Bacteria  normal  0.745401  n/a   
 
 
-
 
NC_007908  Rfer_1980  response regulator receiver modulated metal dependent phosphohydrolase  24.79 
 
 
449 aa  63.5  3e-09  Rhodoferax ferrireducens T118  Bacteria  normal  0.247955  n/a   
 
 
-
 
NC_012918  GM21_2196  two component, sigma54 specific, transcriptional regulator, Fis family  28.37 
 
 
473 aa  63.2  3e-09  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00405028 
 
 
-
 
NC_013501  Rmar_0797  two component, sigma54 specific, transcriptional regulator, Fis family  31.36 
 
 
472 aa  63.5  3e-09  Rhodothermus marinus DSM 4252  Bacteria  normal  0.241811  n/a   
 
 
-
 
NC_010814  Glov_2298  two component, sigma54 specific, transcriptional regulator, Fis family  33.02 
 
 
452 aa  63.2  4e-09  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_0732  two component, sigma54 specific, Fis family transcriptional regulator  31.62 
 
 
471 aa  63.2  4e-09  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.121473  normal 
 
 
-
 
NC_009457  VC0395_A0606  response regulator  26.42 
 
 
447 aa  62.4  5e-09  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_0513  multi-sensor hybrid histidine kinase  29.06 
 
 
803 aa  62.4  5e-09  Sphingomonas wittichii RW1  Bacteria  normal  0.883754  normal 
 
 
-
 
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