More than 300 homologs were found in PanDaTox collection
for query gene Dole_0029 on replicon NC_009943
Organism: Desulfococcus oleovorans Hxd3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009943  Dole_0029  two component LuxR family transcriptional regulator  100 
 
 
214 aa  430  1e-120  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.317943  n/a   
 
 
-
 
NC_011146  Gbem_0451  two component transcriptional regulator, LuxR family  54.25 
 
 
216 aa  222  4e-57  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0467  two component transcriptional regulator, LuxR family  53.77 
 
 
216 aa  219  2e-56  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000507383 
 
 
-
 
NC_002939  GSU0682  LuxR family DNA-binding response regulator  51.64 
 
 
215 aa  214  8e-55  Geobacter sulfurreducens PCA  Bacteria  normal  0.874366  n/a   
 
 
-
 
NC_002939  GSU1293  LuxR family DNA-binding response regulator  50.71 
 
 
216 aa  209  3e-53  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2780  two component LuxR family transcriptional regulator  50.24 
 
 
226 aa  201  6e-51  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1103  two component transcriptional regulator, LuxR family  52.36 
 
 
216 aa  201  7e-51  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_002939  GSU0254  LuxR family DNA-binding response regulator  44.19 
 
 
215 aa  184  7e-46  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_0829  two component LuxR family transcriptional regulator  44.55 
 
 
219 aa  183  2e-45  Opitutus terrae PB90-1  Bacteria  normal  normal  0.0121621 
 
 
-
 
NC_009972  Haur_0983  two component LuxR family transcriptional regulator  41.2 
 
 
213 aa  181  6e-45  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_1664  two component LuxR family transcriptional regulator  42.38 
 
 
218 aa  181  7e-45  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.49018  normal 
 
 
-
 
NC_011891  A2cp1_1966  two component transcriptional regulator, LuxR family  44.81 
 
 
218 aa  180  1e-44  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_1881  two component transcriptional regulator, LuxR family  44.81 
 
 
218 aa  180  1e-44  Anaeromyxobacter sp. K  Bacteria  normal  0.0160211  n/a   
 
 
-
 
NC_013456  VEA_003136  transcriptional regulator LuxR family protein  40.85 
 
 
212 aa  180  1e-44  Vibrio sp. Ex25  Bacteria  normal  0.12843  n/a   
 
 
-
 
NC_009675  Anae109_1810  two component LuxR family transcriptional regulator  44.76 
 
 
218 aa  179  2e-44  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_007760  Adeh_1997  two component LuxR family transcriptional regulator  44.34 
 
 
218 aa  179  3e-44  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_1954  two component transcriptional regulator, LuxR family  44.81 
 
 
220 aa  177  8e-44  Thauera sp. MZ1T  Bacteria  normal  0.228638  n/a   
 
 
-
 
NC_007644  Moth_0975  two component LuxR family transcriptional regulator  41.59 
 
 
222 aa  175  6e-43  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_1809  two component LuxR family transcriptional regulator  44.02 
 
 
210 aa  174  6e-43  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_009455  DehaBAV1_0632  two component LuxR family transcriptional regulator  42.99 
 
 
224 aa  175  6e-43  Dehalococcoides sp. BAV1  Bacteria  hitchhiker  0.00385785  n/a   
 
 
-
 
NC_010681  Bphyt_2656  two component transcriptional regulator, LuxR family  43.4 
 
 
210 aa  174  7e-43  Burkholderia phytofirmans PsJN  Bacteria  normal  0.756738  normal  0.520546 
 
 
-
 
NC_009457  VC0395_A0896  LuxR family transcriptional regulator  39.62 
 
 
216 aa  174  1e-42  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009455  DehaBAV1_0945  two component LuxR family transcriptional regulator  41.86 
 
 
232 aa  174  1e-42  Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_0806  two component LuxR family transcriptional regulator  42.65 
 
 
216 aa  174  1e-42  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_0679  two component LuxR family transcriptional regulator  40.58 
 
 
213 aa  173  2e-42  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_2832  two component transcriptional regulator, LuxR family  42.58 
 
 
210 aa  173  2e-42  Acidovorax ebreus TPSY  Bacteria  normal  0.988429  n/a   
 
 
-
 
NC_007951  Bxe_A1460  two component LuxR family transcriptional regulator  42.92 
 
 
210 aa  173  2e-42  Burkholderia xenovorans LB400  Bacteria  normal  0.39219  normal  0.352919 
 
 
-
 
NC_008782  Ajs_3509  two component LuxR family transcriptional regulator  42.58 
 
 
239 aa  173  2e-42  Acidovorax sp. JS42  Bacteria  normal  0.325902  normal 
 
 
-
 
NC_008752  Aave_3862  two component LuxR family transcriptional regulator  42.11 
 
 
210 aa  172  5e-42  Acidovorax citrulli AAC00-1  Bacteria  normal  0.734244  normal 
 
 
-
 
NC_011830  Dhaf_1205  two component transcriptional regulator, LuxR family  40.95 
 
 
212 aa  171  6e-42  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_013552  DhcVS_601  DNA-binding response regulator, LuxR family  42.06 
 
 
224 aa  171  6e-42  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_0340  two component transcriptional regulator, LuxR family  42.45 
 
 
217 aa  171  7e-42  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00614189  hitchhiker  0.00317709 
 
 
-
 
NC_011666  Msil_2019  two component transcriptional regulator, LuxR family  42.11 
 
 
223 aa  171  8e-42  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_009483  Gura_2782  two component LuxR family transcriptional regulator  45.24 
 
 
214 aa  171  1e-41  Geobacter uraniireducens Rf4  Bacteria  normal  0.834695  n/a   
 
 
-
 
NC_002936  DET0697  LuxR family DNA-binding response regulator  41.59 
 
 
224 aa  170  2e-41  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_0977  two component LuxR family transcriptional regulator  42.58 
 
 
223 aa  170  2e-41  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  decreased coverage  0.00800748  n/a   
 
 
-
 
NC_002936  DET0663  LuxR family DNA-binding response regulator  41.59 
 
 
224 aa  170  2e-41  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_008025  Dgeo_0555  two component LuxR family transcriptional regulator  42.72 
 
 
228 aa  169  3e-41  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_013525  Tter_0300  two component transcriptional regulator, LuxR family  43.46 
 
 
224 aa  169  4e-41  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013552  DhcVS_934  DNA-binding response regulator, LuxR family  41.4 
 
 
232 aa  169  4e-41  Dehalococcoides sp. VS  Bacteria  normal  0.717523  n/a   
 
 
-
 
NC_014212  Mesil_2510  two component transcriptional regulator, LuxR family  41.59 
 
 
217 aa  168  5e-41  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_009675  Anae109_1385  two component LuxR family transcriptional regulator  40.09 
 
 
212 aa  167  8e-41  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_007644  Moth_0023  two component LuxR family transcriptional regulator  43.98 
 
 
221 aa  167  1e-40  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.273145  hitchhiker  1.36124e-06 
 
 
-
 
NC_010506  Swoo_3747  two component LuxR family transcriptional regulator  40.95 
 
 
206 aa  167  1e-40  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_007973  Rmet_0090  two component LuxR family transcriptional regulator  41.23 
 
 
210 aa  167  1e-40  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_011772  BCG9842_B5417  DNA-binding response regulator  41.04 
 
 
215 aa  167  1e-40  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_2713  two component LuxR family transcriptional regulator  43.87 
 
 
208 aa  167  2e-40  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_0032  two component LuxR family transcriptional regulator  39.71 
 
 
210 aa  166  2e-40  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.245451  normal 
 
 
-
 
NC_010320  Teth514_2042  two component LuxR family transcriptional regulator  39.69 
 
 
208 aa  166  2e-40  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_0894  two component LuxR family transcriptional regulator  46.19 
 
 
217 aa  166  2e-40  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_1846  two component transcriptional regulator, LuxR family  41.9 
 
 
212 aa  166  2e-40  Haliangium ochraceum DSM 14365  Bacteria  normal  0.349565  normal  0.2019 
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  41.23 
 
 
213 aa  166  2e-40  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A5535  DNA-binding response regulator  40.09 
 
 
215 aa  166  3e-40  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_6032  response regulator receiver protein  42.52 
 
 
218 aa  166  4e-40  Streptosporangium roseum DSM 43021  Bacteria  normal  0.53611  normal 
 
 
-
 
NC_009524  PsycPRwf_1429  two component LuxR family transcriptional regulator  38.32 
 
 
211 aa  166  4e-40  Psychrobacter sp. PRwf-1  Bacteria  normal  normal  0.85494 
 
 
-
 
NC_002936  DET1063  LuxR family DNA-binding response regulator  40.93 
 
 
232 aa  165  5e-40  Dehalococcoides ethenogenes 195  Bacteria  normal  0.815436  n/a   
 
 
-
 
NC_010184  BcerKBAB4_5205  two component LuxR family transcriptional regulator  41.04 
 
 
215 aa  165  5e-40  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A0121  two component LuxR family transcriptional regulator  41.04 
 
 
210 aa  165  5e-40  Ralstonia eutropha JMP134  Bacteria  normal  0.830531  n/a   
 
 
-
 
NC_007948  Bpro_0881  two component LuxR family transcriptional regulator  40.19 
 
 
210 aa  165  5e-40  Polaromonas sp. JS666  Bacteria  normal  0.464883  normal  0.594453 
 
 
-
 
NC_012791  Vapar_4108  two component transcriptional regulator, LuxR family  40.19 
 
 
210 aa  164  6e-40  Variovorax paradoxus S110  Bacteria  normal  0.755468  n/a   
 
 
-
 
NC_011658  BCAH187_A5591  DNA-binding response regulator  40.09 
 
 
215 aa  164  8e-40  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK5108  response regulator  40.57 
 
 
215 aa  164  9e-40  Bacillus cereus E33L  Bacteria  decreased coverage  0.00235048  n/a   
 
 
-
 
NC_005945  BAS5263  DNA-binding response regulator  40.57 
 
 
215 aa  164  9e-40  Bacillus anthracis str. Sterne  Bacteria  normal  0.24037  n/a   
 
 
-
 
NC_007530  GBAA_5661  DNA-binding response regulator  40.57 
 
 
215 aa  164  9e-40  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_1508  two component LuxR family transcriptional regulator  41.4 
 
 
236 aa  164  9e-40  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_005957  BT9727_5091  response regulator  40.57 
 
 
215 aa  164  9e-40  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_5506  DNA-binding response regulator  40.57 
 
 
215 aa  164  9e-40  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_008825  Mpe_A2902  two component LuxR family transcriptional regulator  43.13 
 
 
212 aa  164  1e-39  Methylibium petroleiphilum PM1  Bacteria  normal  0.255362  normal 
 
 
-
 
NC_012856  Rpic12D_0153  two component transcriptional regulator, LuxR family  41.23 
 
 
210 aa  163  1e-39  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_008255  CHU_1317  response regulator  37.04 
 
 
220 aa  164  1e-39  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.500574  normal  0.0503905 
 
 
-
 
NC_003909  BCE_5540  DNA-binding response regulator  40.09 
 
 
215 aa  164  1e-39  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc0292  response regulator transcription regulator protein  40.76 
 
 
210 aa  164  1e-39  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_1194  two component transcriptional regulator, LuxR family  39.15 
 
 
217 aa  164  1e-39  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.272513  n/a   
 
 
-
 
NC_008576  Mmc1_2093  two component LuxR family transcriptional regulator  38.86 
 
 
206 aa  162  3e-39  Magnetococcus sp. MC-1  Bacteria  hitchhiker  0.000328625  normal  0.180863 
 
 
-
 
NC_010571  Oter_1700  two component LuxR family transcriptional regulator  39.81 
 
 
213 aa  162  3e-39  Opitutus terrae PB90-1  Bacteria  normal  normal  0.226192 
 
 
-
 
NC_007947  Mfla_1089  two component LuxR family transcriptional regulator  40 
 
 
210 aa  162  3e-39  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_0945  two component LuxR family transcriptional regulator  40 
 
 
210 aa  162  3e-39  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_0145  two component transcriptional regulator, LuxR family  40.76 
 
 
210 aa  162  5e-39  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_2804  two component transcriptional regulator, LuxR family  46.5 
 
 
216 aa  161  5e-39  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.995251  normal  0.311692 
 
 
-
 
NC_008700  Sama_1873  response regulator receiver protein  39.05 
 
 
215 aa  161  7e-39  Shewanella amazonensis SB2B  Bacteria  normal  0.56104  normal 
 
 
-
 
NC_008044  TM1040_0876  two component LuxR family transcriptional regulator  40.95 
 
 
233 aa  161  8e-39  Ruegeria sp. TM1040  Bacteria  normal  0.481499  normal  0.345787 
 
 
-
 
NC_008781  Pnap_0922  two component LuxR family transcriptional regulator  39.71 
 
 
210 aa  161  9e-39  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.114328  normal 
 
 
-
 
NC_011831  Cagg_3668  two component transcriptional regulator, LuxR family  41.67 
 
 
213 aa  160  1e-38  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_011898  Ccel_1863  two component transcriptional regulator, LuxR family  38.21 
 
 
216 aa  160  1e-38  Clostridium cellulolyticum H10  Bacteria  hitchhiker  5.48978e-06  n/a   
 
 
-
 
NC_009972  Haur_2171  two component LuxR family transcriptional regulator  39.62 
 
 
218 aa  160  1e-38  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.0762379  n/a   
 
 
-
 
NC_007908  Rfer_1873  two component LuxR family transcriptional regulator  40.28 
 
 
219 aa  160  1e-38  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_1607  response regulator  40.19 
 
 
214 aa  159  2e-38  Shewanella amazonensis SB2B  Bacteria  hitchhiker  1.06395e-06  normal 
 
 
-
 
NC_007492  Pfl01_3957  two component LuxR family transcriptional regulator  41.71 
 
 
219 aa  160  2e-38  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_3421  two component LuxR family transcriptional regulator  43.63 
 
 
223 aa  159  3e-38  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.0556432 
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  39.62 
 
 
216 aa  159  3e-38  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_3042  two component LuxR family transcriptional regulator  40.09 
 
 
222 aa  159  4e-38  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.280021 
 
 
-
 
NC_009767  Rcas_3262  two component LuxR family transcriptional regulator  41.28 
 
 
222 aa  158  5e-38  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.764026 
 
 
-
 
NC_012918  GM21_1971  two component transcriptional regulator, LuxR family  40 
 
 
216 aa  158  5e-38  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_010725  Mpop_3747  two component transcriptional regulator, LuxR family  39.34 
 
 
221 aa  158  6e-38  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_4516  two component LuxR family transcriptional regulator  41.06 
 
 
214 aa  158  6e-38  Cupriavidus metallidurans CH34  Bacteria  normal  0.0463384  normal  0.0270495 
 
 
-
 
NC_013204  Elen_1743  two component transcriptional regulator, LuxR family  38.57 
 
 
214 aa  158  7e-38  Eggerthella lenta DSM 2243  Bacteria  normal  0.370009  normal  0.039988 
 
 
-
 
NC_003295  RSc2312  two-component response regulator transcription regulator protein  40.85 
 
 
238 aa  158  7e-38  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.500036 
 
 
-
 
NC_009972  Haur_3654  two component LuxR family transcriptional regulator  41.51 
 
 
221 aa  157  8e-38  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  2.10563e-05  n/a   
 
 
-
 
NC_007614  Nmul_A1336  two component LuxR family transcriptional regulator  40.95 
 
 
208 aa  157  8e-38  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_2649  response regulator  38.46 
 
 
214 aa  157  1e-37  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
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