More than 300 homologs were found in PanDaTox collection
for query gene DhcVS_944 on replicon NC_013552
Organism: Dehalococcoides sp. VS



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013552  DhcVS_944  transcriptional regulator  100 
 
 		 223 aa  449  1e-125  Dehalococcoides sp. VS  Bacteria  normal  1  n/a   
 
 
-
 
NC_002936  DET1126  transcriptional regulator  87.89 
 
 		 223 aa  406  1.0000000000000001e-112  Dehalococcoides ethenogenes 195  Bacteria  decreased coverage  0.0000289398  n/a   
 
 
-
 
NC_009455  DehaBAV1_0955  two component transcriptional regulator  87.89 
 
 		 223 aa  402  1e-111  Dehalococcoides sp. BAV1  Bacteria  normal  1  n/a   
 
 
-
 
NC_012669  Bcav_3419  putative two component transcriptional regulator, winged helix family  54.62 
 
 		 240 aa  136  3.0000000000000003e-31  Beutenbergia cavernae DSM 12333  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014165  Tbis_0453  putative winged helix family two component transcriptional regulator  50.77 
 
 		 251 aa  132  3.9999999999999996e-30  Thermobispora bispora DSM 43833  Bacteria  normal  0.190844  normal  0.275136 
 
 
-
 
NC_013510  Tcur_0595  putative two component transcriptional regulator, winged helix family  51.47 
 
 		 237 aa  132  5e-30  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_014210  Ndas_4376  putative two component transcriptional regulator, winged helix family  51.97 
 
 		 255 aa  131  1.0000000000000001e-29  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008699  Noca_4240  transcriptional regulator domain-containing protein  50 
 
 		 257 aa  131  1.0000000000000001e-29  Nocardioides sp. JS614  Bacteria  normal  0.466466  n/a   
 
 
-
 
NC_009012  Cthe_1394  two component transcriptional regulator  37.89 
 
 		 236 aa  129  3e-29  Clostridium thermocellum ATCC 27405  Bacteria  decreased coverage  0.00000024965  n/a   
 
 
-
 
NC_013530  Xcel_3035  putative two component transcriptional regulator, winged helix family  50 
 
 		 243 aa  127  1.0000000000000001e-28  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
-
 
NC_007333  Tfu_2737  transcriptional regulatory protein  53.6 
 
 		 253 aa  127  1.0000000000000001e-28  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_0895  response regulator receiver protein  50.77 
 
 		 237 aa  126  2.0000000000000002e-28  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008578  Acel_2025  response regulator receiver protein  55.96 
 
 		 261 aa  126  3e-28  Acidothermus cellulolyticus 11B  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009380  Strop_0293  winged helix family two component response transcriptional regulator  38.29 
 
 		 239 aa  125  5e-28  Salinispora tropica CNB-440  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013947  Snas_6372  putative two component transcriptional regulator, winged helix family  50 
 
 		 236 aa  125  6e-28  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009664  Krad_0879  putative two component transcriptional regulator, winged helix family  49.62 
 
 		 259 aa  124  1e-27  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.249855  hitchhiker  0.00478466 
 
 
-
 
NC_010816  BLD_1194  putative response regulator  56.31 
 
 		 266 aa  124  1e-27  Bifidobacterium longum DJO10A  Bacteria  normal  1  n/a   
 
 
-
 
NC_013174  Jden_0439  putative two component transcriptional regulator, winged helix family  50 
 
 		 248 aa  124  1e-27  Jonesia denitrificans DSM 20603  Bacteria  normal  1  normal  0.190602 
 
 
-
 
NC_009253  Dred_0707  two component transcriptional regulator  38.96 
 
 		 232 aa  123  2e-27  Desulfotomaculum reducens MI-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013521  Sked_04930  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  49.62 
 
 		 249 aa  123  3e-27  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.793732  normal  1 
 
 
-
 
NC_014151  Cfla_3090  putative two component transcriptional regulator, winged helix family  47.69 
 
 		 241 aa  123  3e-27  Cellulomonas flavigena DSM 20109  Bacteria  normal  1  hitchhiker  0.0000121276 
 
 
-
 
NC_013757  Gobs_4646  putative two component transcriptional regulator, winged helix family  45.99 
 
 		 249 aa  122  5e-27  Geodermatophilus obscurus DSM 43160  Bacteria  normal  1  n/a   
 
 
-
 
NC_013124  Afer_0241  putative two component transcriptional regulator, winged helix family  45.93 
 
 		 217 aa  121  9e-27  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  1  n/a   
 
 
-
 
NC_011898  Ccel_2106  two component transcriptional regulator, winged helix family  36.96 
 
 		 238 aa  120  9.999999999999999e-27  Clostridium cellulolyticum H10  Bacteria  normal  1  n/a   
 
 
-
 
NC_012034  Athe_1487  two component transcriptional regulator, winged helix family  33.62 
 
 		 232 aa  120  1.9999999999999998e-26  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.487145  n/a   
 
 
-
 
NC_002936  DET1162  transcriptional regulator, putative  48.03 
 
 		 238 aa  120  1.9999999999999998e-26  Dehalococcoides ethenogenes 195  Bacteria  normal  0.829609  n/a   
 
 
-
 
NC_009921  Franean1_6176  winged helix family two component response transcriptional regulator  49.23 
 
 		 247 aa  120  1.9999999999999998e-26  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.186762 
 
 
-
 
NC_007644  Moth_0070  two component transcriptional regulator  48.55 
 
 		 229 aa  120  1.9999999999999998e-26  Moorella thermoacetica ATCC 39073  Bacteria  normal  1  normal  0.834843 
 
 
-
 
NC_007777  Francci3_0443  response regulator receiver protein  49.23 
 
 		 250 aa  120  1.9999999999999998e-26  Frankia sp. CcI3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009953  Sare_0337  winged helix family two component response transcriptional regulator  37.67 
 
 		 239 aa  120  1.9999999999999998e-26  Salinispora arenicola CNS-205  Bacteria  normal  1  normal  0.0279779 
 
 
-
 
NC_013235  Namu_4983  putative two component transcriptional regulator, winged helix family  46.27 
 
 		 232 aa  119  3e-26  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013159  Svir_37670  response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein  40.1 
 
 		 256 aa  119  3.9999999999999996e-26  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  0.0528352 
 
 
-
 
NC_011886  Achl_2724  putative two component transcriptional regulator, winged helix family  46.15 
 
 		 232 aa  119  3.9999999999999996e-26  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00387379 
 
 
-
 
NC_013093  Amir_6823  putative two component transcriptional regulator, winged helix family  45.38 
 
 		 250 aa  119  4.9999999999999996e-26  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_013131  Caci_8253  putative two component transcriptional regulator, winged helix family  49.24 
 
 		 264 aa  119  4.9999999999999996e-26  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008541  Arth_3012  response regulator receiver protein  46.15 
 
 		 232 aa  118  9e-26  Arthrobacter sp. FB24  Bacteria  normal  0.721979  n/a   
 
 
-
 
NC_013440  Hoch_6843  putative two component transcriptional regulator, winged helix family  46.88 
 
 		 258 aa  117  9e-26  Haliangium ochraceum DSM 14365  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010483  TRQ2_1174  two component transcriptional regulator  47.86 
 
 		 239 aa  117  9.999999999999999e-26  Thermotoga sp. RQ2  Bacteria  normal  0.0181894  n/a   
 
 
-
 
NC_010003  Pmob_0875  two component transcriptional regulator  46.84 
 
 		 242 aa  117  9.999999999999999e-26  Petrotoga mobilis SJ95  Bacteria  decreased coverage  0.000486966  n/a   
 
 
-
 
NC_009486  Tpet_1136  two component transcriptional regulator  47.86 
 
 		 239 aa  117  9.999999999999999e-26  Thermotoga petrophila RKU-1  Bacteria  hitchhiker  0.000000652217  n/a   
 
 
-
 
NC_009616  Tmel_1838  two component transcriptional regulator  46.43 
 
 		 239 aa  117  1.9999999999999998e-25  Thermosipho melanesiensis BI429  Bacteria  hitchhiker  0.00000194698  n/a   
 
 
-
 
NC_009338  Mflv_1650  response regulator receiver protein  47.73 
 
 		 278 aa  116  3e-25  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.0110992  normal  1 
 
 
-
 
NC_013441  Gbro_3935  transcriptional regulator domain protein  55.67 
 
 		 270 aa  115  3.9999999999999997e-25  Gordonia bronchialis DSM 43247  Bacteria  normal  1  n/a   
 
 
-
 
NC_013757  Gobs_2351  two component transcriptional regulator, winged helix family  38.84 
 
 		 231 aa  115  3.9999999999999997e-25  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.274912  n/a   
 
 
-
 
NC_008146  Mmcs_4525  response regulator receiver protein  46.97 
 
 		 257 aa  116  3.9999999999999997e-25  Mycobacterium sp. MCS  Bacteria  normal  1  n/a   
 
 
-
 
NC_008705  Mkms_4612  response regulator receiver protein  46.97 
 
 		 257 aa  116  3.9999999999999997e-25  Mycobacterium sp. KMS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009077  Mjls_4908  response regulator receiver protein  46.97 
 
 		 257 aa  116  3.9999999999999997e-25  Mycobacterium sp. JLS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009718  Fnod_1490  two component transcriptional regulator  47.14 
 
 		 239 aa  115  5e-25  Fervidobacterium nodosum Rt17-B1  Bacteria  unclonable  0.000000000120928  n/a   
 
 
-
 
NC_014158  Tpau_3545  putative two component transcriptional regulator, winged helix family  48.48 
 
 		 243 aa  115  6.9999999999999995e-25  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.61486  n/a   
 
 
-
 
NC_013721  HMPREF0424_0189  transcriptional regulatory protein, C-terminal domain protein  54.08 
 
 		 296 aa  114  1.0000000000000001e-24  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  1 
 
 
-
 
NC_008726  Mvan_5097  response regulator receiver protein  48.06 
 
 		 267 aa  114  1.0000000000000001e-24  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009565  TBFG_10833  transcriptional regulatory protein  45.45 
 
 		 255 aa  113  2.0000000000000002e-24  Mycobacterium tuberculosis F11  Bacteria  normal  1  hitchhiker  0.00597919 
 
 
-
 
NC_012034  Athe_0080  two component transcriptional regulator, winged helix family  43.05 
 
 		 230 aa  113  3e-24  Anaerocellum thermophilum DSM 6725  Bacteria  normal  1  n/a   
 
 
-
 
NC_013385  Adeg_1011  two component transcriptional regulator, winged helix family  35.9 
 
 		 231 aa  112  3e-24  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_013170  Ccur_08240  response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein  44.37 
 
 		 236 aa  111  7.000000000000001e-24  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.956318  normal  0.778898 
 
 
-
 
NC_007413  Ava_1917  two component transcriptional regulator  34.36 
 
 		 238 aa  111  1.0000000000000001e-23  Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  0.332821 
 
 
-
 
NC_014212  Mesil_0841  two component transcriptional regulator, winged helix family  34.96 
 
 		 223 aa  110  2.0000000000000002e-23  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008025  Dgeo_0130  two component transcriptional regulator  41.03 
 
 		 229 aa  110  2.0000000000000002e-23  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.848842  normal  1 
 
 
-
 
NC_013216  Dtox_1077  two component transcriptional regulator, winged helix family  36.79 
 
 		 235 aa  110  2.0000000000000002e-23  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009012  Cthe_2333  two component transcriptional regulator  35.37 
 
 		 232 aa  110  2.0000000000000002e-23  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_014248  Aazo_2507  winged helix family two component transcriptional regulator  33.92 
 
 		 233 aa  109  4.0000000000000004e-23  'Nostoc azollae' 0708  Bacteria  normal  1  n/a   
 
 
-
 
NC_012793  GWCH70_3409  two component transcriptional regulator, winged helix family  35.9 
 
 		 236 aa  108  6e-23  Geobacillus sp. WCH70  Bacteria  normal  1  n/a   
 
 
-
 
NC_011898  Ccel_3394  two component transcriptional regulator, winged helix family  34.05 
 
 		 230 aa  108  8.000000000000001e-23  Clostridium cellulolyticum H10  Bacteria  normal  0.103692  n/a   
 
 
-
 
NC_009767  Rcas_2782  two component transcriptional regulator  35.4 
 
 		 231 aa  107  1e-22  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.92379  normal  1 
 
 
-
 
NC_008346  Swol_0951  response regulator receiver protein  33.91 
 
 		 239 aa  107  1e-22  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  unclonable  0.0000000111905  n/a   
 
 
-
 
NC_009092  Shew_2749  two component transcriptional regulator  35.09 
 
 		 241 aa  107  1e-22  Shewanella loihica PV-4  Bacteria  decreased coverage  0.00000593879  unclonable  0.00000330773 
 
 
-
 
NC_013510  Tcur_0700  two component transcriptional regulator, winged helix family  33.62 
 
 		 226 aa  107  2e-22  Thermomonospora curvata DSM 43183  Bacteria  normal  0.768939  n/a   
 
 
-
 
NC_009767  Rcas_0353  two component transcriptional regulator  36.09 
 
 		 230 aa  107  2e-22  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  0.683455 
 
 
-
 
NC_011830  Dhaf_2286  two component transcriptional regulator, winged helix family  33.19 
 
 		 231 aa  107  2e-22  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.000000000000188753  n/a   
 
 
-
 
NC_007643  Rru_A0603  two component transcriptional regulator  36.61 
 
 		 233 aa  106  3e-22  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.0519325  n/a   
 
 
-
 
NC_010320  Teth514_1997  two component transcriptional regulator  45.45 
 
 		 234 aa  106  3e-22  Thermoanaerobacter sp. X514  Bacteria  hitchhiker  0.000000742772  n/a   
 
 
-
 
NC_010184  BcerKBAB4_5259  two component transcriptional regulator  36.75 
 
 		 235 aa  106  4e-22  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.000559572  n/a   
 
 
-
 
NC_008148  Rxyl_2781  two component transcriptional regulator  32.3 
 
 		 241 aa  105  4e-22  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_011149  SeAg_B0435  transcriptional regulator PhoB  36.7 
 
 		 229 aa  105  5e-22  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  1  n/a   
 
 
-
 
NC_008261  CPF_0623  DNA-binding response regulator  34.96 
 
 		 231 aa  105  5e-22  Clostridium perfringens ATCC 13124  Bacteria  hitchhiker  0.000212568  n/a   
 
 
-
 
NC_009513  Lreu_0019  two component transcriptional regulator  35.37 
 
 		 235 aa  105  6e-22  Lactobacillus reuteri DSM 20016  Bacteria  normal  1  n/a   
 
 
-
 
NC_010424  Daud_1419  two component transcriptional regulator  47.79 
 
 		 231 aa  105  6e-22  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.0720218  n/a   
 
 
-
 
NC_013411  GYMC61_3538  two component transcriptional regulator, winged helix family  37.29 
 
 		 237 aa  105  7e-22  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011661  Dtur_1237  two component transcriptional regulator, winged helix family  30.97 
 
 		 232 aa  105  7e-22  Dictyoglomus turgidum DSM 6724  Bacteria  normal  1  n/a   
 
 
-
 
NC_010001  Cphy_1954  two component transcriptional regulator  36.96 
 
 		 229 aa  105  7e-22  Clostridium phytofermentans ISDg  Bacteria  decreased coverage  0.000155813  n/a   
 
 
-
 
NC_009674  Bcer98_2250  two component transcriptional regulator  32.71 
 
 		 225 aa  105  8e-22  Bacillus cytotoxicus NVH 391-98  Bacteria  decreased coverage  0.00000295266  n/a   
 
 
-
 
NC_013526  Tter_2867  two component transcriptional regulator, winged helix family  39.18 
 
 		 233 aa  105  8e-22  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  1  n/a   
 
 
-
 
NC_003909  BCE_5615  DNA-binding response regulator YycF  36.75 
 
 		 235 aa  104  9e-22  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_009674  Bcer98_4006  two component transcriptional regulator  36.75 
 
 		 235 aa  104  9e-22  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.010356  n/a   
 
 
-
 
NC_005945  BAS5319  DNA-binding response regulator YycF  36.75 
 
 		 235 aa  104  9e-22  Bacillus anthracis str. Sterne  Bacteria  normal  0.169223  n/a   
 
 
-
 
NC_011773  BCAH820_5572  DNA-binding response regulator YycF  36.75 
 
 		 235 aa  104  9e-22  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.81316e-29 
 
 
-
 
NC_005957  BT9727_5147  response regulator  36.75 
 
 		 235 aa  104  9e-22  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00168683  n/a   
 
 
-
 
NC_006274  BCZK5163  response regulator  36.75 
 
 		 235 aa  104  9e-22  Bacillus cereus E33L  Bacteria  hitchhiker  0.00196509  n/a   
 
 
-
 
NC_007530  GBAA_5715  DNA-binding response regulator YycF  36.75 
 
 		 235 aa  104  9e-22  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.656882  n/a   
 
 
-
 
NC_011658  BCAH187_A5650  DNA-binding response regulator YycF  36.75 
 
 		 235 aa  104  9e-22  Bacillus cereus AH187  Bacteria  hitchhiker  0.00563499  n/a   
 
 
-
 
NC_012793  GWCH70_1924  two component transcriptional regulator, winged helix family  45 
 
 		 225 aa  104  9e-22  Geobacillus sp. WCH70  Bacteria  normal  1  n/a   
 
 
-
 
NC_010506  Swoo_3452  two component transcriptional regulator  34.21 
 
 		 229 aa  104  1e-21  Shewanella woodyi ATCC 51908  Bacteria  hitchhiker  0.00686704  hitchhiker  0.000158375 
 
 
-
 
NC_011772  BCG9842_B5346  DNA-binding response regulator YycF  36.75 
 
 		 235 aa  104  1e-21  Bacillus cereus G9842  Bacteria  hitchhiker  0.000000234523  hitchhiker  0.00000000000323141 
 
 
-
 
NC_011725  BCB4264_A5589  DNA-binding response regulator YycF  36.75 
 
 		 235 aa  104  1e-21  Bacillus cereus B4264  Bacteria  normal  0.0469644  n/a   
 
 
-
 
NC_011312  VSAL_I2457  response regulator homolog PhoB (phosphate regulon transcriptional regulatory protein)  37.5 
 
 		 230 aa  104  1e-21  Aliivibrio salmonicida LFI1238  Bacteria  normal  1  n/a   
 
 
-
 
NC_008010  Dgeo_2598  two component transcriptional regulator  47.29 
 
 		 134 aa  104  1e-21  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.157515  n/a   
 
 
-
 
NC_012803  Mlut_03750  PhoP-like protein  35.89 
 
 		 226 aa  104  1e-21  Micrococcus luteus NCTC 2665  Bacteria  normal  0.181369  n/a   
 
 
-
 
NC_008530  LGAS_0064  DNA-binding response regulator  33.19 
 
 		 235 aa  104  1e-21  Lactobacillus gasseri ATCC 33323  Bacteria  normal  0.611294  normal  1 
 
 
-
 
NC_008531  LEUM_1950  DNA-binding response regulator  34.62 
 
 		 235 aa  104  1e-21  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  0.100456  n/a   
 
 
-
 
NC_013131  Caci_8215  two component transcriptional regulator, winged helix family  34.5 
 
 		 226 aa  103  2e-21  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
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