More than 300 homologs were found in PanDaTox collection
for query gene DhcVS_926 on replicon NC_013552
Organism: Dehalococcoides sp. VS



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013552  DhcVS_926  two-component system, OmpR family, response regulator  100 
 
 		 227 aa  456  1e-127  Dehalococcoides sp. VS  Bacteria  hitchhiker  0.00200634  n/a   
 
 
-
 
NC_009455  DehaBAV1_0937  two component transcriptional regulator  90.31 
 
 		 227 aa  416  9.999999999999999e-116  Dehalococcoides sp. BAV1  Bacteria  normal  0.834094  n/a   
 
 
-
 
NC_002936  DET1058  DNA-binding response regulator  87.67 
 
 		 227 aa  406  1.0000000000000001e-112  Dehalococcoides ethenogenes 195  Bacteria  decreased coverage  0.000187393  n/a   
 
 
-
 
NC_009523  RoseRS_3485  two component transcriptional regulator  52.73 
 
 		 236 aa  238  5e-62  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009767  Rcas_0960  two component transcriptional regulator  52.27 
 
 		 236 aa  236  3e-61  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  0.0214647 
 
 
-
 
NC_013165  Shel_00330  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  53.3 
 
 		 240 aa  236  3e-61  Slackia heliotrinireducens DSM 20476  Bacteria  decreased coverage  0.00972196  normal  1 
 
 
-
 
NC_013170  Ccur_11690  response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein  53.3 
 
 		 236 aa  235  4e-61  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.52451  normal  1 
 
 
-
 
NC_009972  Haur_2358  two component transcriptional regulator  51.34 
 
 		 231 aa  231  5e-60  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.0136772  n/a   
 
 
-
 
NC_013203  Apar_1349  two component transcriptional regulator, winged helix family  52.23 
 
 		 237 aa  229  3e-59  Atopobium parvulum DSM 20469  Bacteria  normal  1  normal  0.421984 
 
 
-
 
NC_013204  Elen_0258  two component transcriptional regulator, winged helix family  51.54 
 
 		 236 aa  229  4e-59  Eggerthella lenta DSM 2243  Bacteria  normal  0.606292  normal  1 
 
 
-
 
NC_011831  Cagg_2709  two component transcriptional regulator, winged helix family  53.04 
 
 		 236 aa  227  1e-58  Chloroflexus aggregans DSM 9485  Bacteria  decreased coverage  0.0011921  normal  1 
 
 
-
 
NC_010320  Teth514_1155  two component transcriptional regulator  51.32 
 
 		 231 aa  226  2e-58  Thermoanaerobacter sp. X514  Bacteria  decreased coverage  0.000000430064  n/a   
 
 
-
 
NC_009012  Cthe_1847  two component transcriptional regulator  50.22 
 
 		 234 aa  225  4e-58  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.00000121968  n/a   
 
 
-
 
NC_010320  Teth514_0766  two component transcriptional regulator  50.44 
 
 		 231 aa  222  4e-57  Thermoanaerobacter sp. X514  Bacteria  normal  0.585906  n/a   
 
 
-
 
NC_009972  Haur_3061  two component transcriptional regulator  51.09 
 
 		 227 aa  221  6e-57  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.799336  n/a   
 
 
-
 
NC_010001  Cphy_2121  two component transcriptional regulator  51.56 
 
 		 231 aa  221  7e-57  Clostridium phytofermentans ISDg  Bacteria  normal  1  n/a   
 
 
-
 
NC_011898  Ccel_1714  two component transcriptional regulator, winged helix family  48.67 
 
 		 234 aa  221  9.999999999999999e-57  Clostridium cellulolyticum H10  Bacteria  normal  0.233786  n/a   
 
 
-
 
NC_011661  Dtur_1237  two component transcriptional regulator, winged helix family  50 
 
 		 232 aa  220  9.999999999999999e-57  Dictyoglomus turgidum DSM 6724  Bacteria  normal  1  n/a   
 
 
-
 
NC_007644  Moth_0070  two component transcriptional regulator  50.45 
 
 		 229 aa  219  1.9999999999999999e-56  Moorella thermoacetica ATCC 39073  Bacteria  normal  1  normal  0.834843 
 
 
-
 
NC_011830  Dhaf_1367  two component transcriptional regulator, winged helix family  51.34 
 
 		 230 aa  217  1e-55  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.000000177207  n/a   
 
 
-
 
NC_014210  Ndas_4670  two component transcriptional regulator, winged helix family  46.49 
 
 		 234 aa  216  2.9999999999999998e-55  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011899  Hore_13280  two component transcriptional regulator, winged helix family  49.12 
 
 		 227 aa  216  2.9999999999999998e-55  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.0000000536961  n/a   
 
 
-
 
NC_013947  Snas_5345  two component transcriptional regulator, winged helix family  46.43 
 
 		 230 aa  214  5.9999999999999996e-55  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  0.264155 
 
 
-
 
NC_013739  Cwoe_5905  two component transcriptional regulator, winged helix family  48.68 
 
 		 237 aa  214  5.9999999999999996e-55  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013205  Aaci_2922  two component transcriptional regulator, winged helix family  48.7 
 
 		 230 aa  213  9.999999999999999e-55  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.221617  n/a   
 
 
-
 
NC_008346  Swol_1681  response regulator receiver protein  50.45 
 
 		 227 aa  214  9.999999999999999e-55  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.0956507  n/a   
 
 
-
 
NC_008148  Rxyl_2983  two component transcriptional regulator  48.89 
 
 		 228 aa  211  5.999999999999999e-54  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_013385  Adeg_1028  two component transcriptional regulator, winged helix family  49.1 
 
 		 237 aa  211  9e-54  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_012803  Mlut_03750  PhoP-like protein  46.88 
 
 		 226 aa  209  2e-53  Micrococcus luteus NCTC 2665  Bacteria  normal  0.181369  n/a   
 
 
-
 
NC_009767  Rcas_0353  two component transcriptional regulator  47.37 
 
 		 230 aa  207  9e-53  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  0.683455 
 
 
-
 
NC_012034  Athe_1456  two component transcriptional regulator, winged helix family  47.75 
 
 		 223 aa  207  1e-52  Anaerocellum thermophilum DSM 6725  Bacteria  decreased coverage  0.000183373  n/a   
 
 
-
 
NC_013411  GYMC61_0785  two component transcriptional regulator, winged helix family  48.26 
 
 		 235 aa  206  2e-52  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011898  Ccel_1892  two component transcriptional regulator, winged helix family  46.43 
 
 		 228 aa  207  2e-52  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.0000392  n/a   
 
 
-
 
NC_013124  Afer_0200  two component transcriptional regulator, winged helix family  48.21 
 
 		 242 aa  206  3e-52  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.0955644  n/a   
 
 
-
 
NC_013159  Svir_02690  response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein  46.72 
 
 		 229 aa  205  4e-52  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009012  Cthe_1288  two component transcriptional regulator  46.67 
 
 		 228 aa  205  4e-52  Clostridium thermocellum ATCC 27405  Bacteria  decreased coverage  0.00000000128008  n/a   
 
 
-
 
NC_009767  Rcas_2782  two component transcriptional regulator  46.05 
 
 		 231 aa  205  5e-52  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.92379  normal  1 
 
 
-
 
NC_009921  Franean1_6145  two component transcriptional regulator  46.64 
 
 		 228 aa  204  7e-52  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.788201 
 
 
-
 
NC_011831  Cagg_3302  two component transcriptional regulator, winged helix family  48.25 
 
 		 231 aa  204  8e-52  Chloroflexus aggregans DSM 9485  Bacteria  normal  1  hitchhiker  0.000343135 
 
 
-
 
NC_007413  Ava_1944  two component transcriptional regulator  47.19 
 
 		 238 aa  204  9e-52  Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_8764  response regulator receiver protein  47.58 
 
 		 229 aa  204  9e-52  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013205  Aaci_1104  two component transcriptional regulator, winged helix family  49.56 
 
 		 233 aa  204  1e-51  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_008726  Mvan_0831  two component transcriptional regulator  44.44 
 
 		 228 aa  203  2e-51  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.310785  normal  1 
 
 
-
 
NC_009338  Mflv_0082  two component transcriptional regulator  44.89 
 
 		 228 aa  203  2e-51  Mycobacterium gilvum PYR-GCK  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008146  Mmcs_0661  two component transcriptional regulator  44.89 
 
 		 228 aa  202  3e-51  Mycobacterium sp. MCS  Bacteria  normal  1  n/a   
 
 
-
 
NC_013757  Gobs_4602  two component transcriptional regulator, winged helix family  45.74 
 
 		 226 aa  202  3e-51  Geodermatophilus obscurus DSM 43160  Bacteria  normal  1  n/a   
 
 
-
 
NC_008705  Mkms_0674  two component transcriptional regulator  44.89 
 
 		 228 aa  202  3e-51  Mycobacterium sp. KMS  Bacteria  normal  1  normal  0.850641 
 
 
-
 
NC_009077  Mjls_0654  two component transcriptional regulator  44.89 
 
 		 228 aa  202  3e-51  Mycobacterium sp. JLS  Bacteria  normal  1  normal  0.682961 
 
 
-
 
NC_009767  Rcas_1504  two component transcriptional regulator  46.72 
 
 		 231 aa  202  5e-51  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.263867  normal  0.57819 
 
 
-
 
NC_014165  Tbis_0499  winged helix family two component transcriptional regulator  47.32 
 
 		 229 aa  202  5e-51  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012803  Mlut_14770  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  48.18 
 
 		 226 aa  201  6e-51  Micrococcus luteus NCTC 2665  Bacteria  normal  0.383411  n/a   
 
 
-
 
NC_007912  Sde_3703  two component transcriptional regulator  46.12 
 
 		 232 aa  201  7e-51  Saccharophagus degradans 2-40  Bacteria  normal  0.230236  normal  0.0884672 
 
 
-
 
NC_009565  TBFG_10499  two component system sensor transduction protein regX3  44.64 
 
 		 227 aa  200  9.999999999999999e-51  Mycobacterium tuberculosis F11  Bacteria  decreased coverage  2.46064e-66  normal  1 
 
 
-
 
NC_013510  Tcur_0700  two component transcriptional regulator, winged helix family  47.11 
 
 		 226 aa  200  9.999999999999999e-51  Thermomonospora curvata DSM 43183  Bacteria  normal  0.768939  n/a   
 
 
-
 
NC_011830  Dhaf_3739  two component transcriptional regulator, winged helix family  47.06 
 
 		 230 aa  201  9.999999999999999e-51  Desulfitobacterium hafniense DCB-2  Bacteria  decreased coverage  0.0000000000466515  n/a   
 
 
-
 
NC_011899  Hore_04710  two component transcriptional regulator, winged helix family  48.23 
 
 		 237 aa  201  9.999999999999999e-51  Halothermothrix orenii H 168  Bacteria  normal  1  n/a   
 
 
-
 
NC_009972  Haur_1488  two component transcriptional regulator  45.85 
 
 		 228 aa  200  9.999999999999999e-51  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.00208742  n/a   
 
 
-
 
NC_014158  Tpau_0654  two component transcriptional regulator, winged helix family  45.13 
 
 		 229 aa  199  1.9999999999999998e-50  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.200991  n/a   
 
 
-
 
NC_010718  Nther_0916  two component transcriptional regulator, winged helix family  44.59 
 
 		 234 aa  200  1.9999999999999998e-50  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.0276045  hitchhiker  9.727110000000001e-18 
 
 
-
 
NC_011898  Ccel_3394  two component transcriptional regulator, winged helix family  47.56 
 
 		 230 aa  200  1.9999999999999998e-50  Clostridium cellulolyticum H10  Bacteria  normal  0.103692  n/a   
 
 
-
 
NC_013216  Dtox_1077  two component transcriptional regulator, winged helix family  47.39 
 
 		 235 aa  199  1.9999999999999998e-50  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008532  STER_1116  DNA-binding response regulator  47.84 
 
 		 235 aa  200  1.9999999999999998e-50  Streptococcus thermophilus LMD-9  Bacteria  normal  0.310768  n/a   
 
 
-
 
NC_009953  Sare_0904  two component transcriptional regulator  47.56 
 
 		 229 aa  199  1.9999999999999998e-50  Salinispora arenicola CNS-205  Bacteria  normal  1  normal  0.0335314 
 
 
-
 
NC_013169  Ksed_03700  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  46.64 
 
 		 226 aa  199  3e-50  Kytococcus sedentarius DSM 20547  Bacteria  normal  1  normal  0.132847 
 
 
-
 
NC_013131  Caci_8215  two component transcriptional regulator, winged helix family  45.74 
 
 		 226 aa  199  3e-50  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011831  Cagg_0243  two component transcriptional regulator, winged helix family  47.77 
 
 		 235 aa  199  3e-50  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.0646165  normal  1 
 
 
-
 
NC_009380  Strop_0967  response regulator receiver  47.56 
 
 		 229 aa  199  3.9999999999999996e-50  Salinispora tropica CNB-440  Bacteria  normal  0.359698  normal  0.873584 
 
 
-
 
NC_008527  LACR_0444  DNA-binding response regulator  48.47 
 
 		 233 aa  199  3.9999999999999996e-50  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  1  n/a   
 
 
-
 
NC_008607  Ppro_3691  two component transcriptional regulator  45.13 
 
 		 230 aa  199  3.9999999999999996e-50  Pelobacter propionicus DSM 2379  Bacteria  normal  1  n/a   
 
 
-
 
NC_004116  SAG0719  DNA-binding response regulator  47.41 
 
 		 236 aa  198  5e-50  Streptococcus agalactiae 2603V/R  Bacteria  normal  0.0951718  n/a   
 
 
-
 
NC_012793  GWCH70_3409  two component transcriptional regulator, winged helix family  46.32 
 
 		 236 aa  198  5e-50  Geobacillus sp. WCH70  Bacteria  normal  1  n/a   
 
 
-
 
NC_013411  GYMC61_3538  two component transcriptional regulator, winged helix family  46.55 
 
 		 237 aa  198  5e-50  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_007644  Moth_0827  two component transcriptional regulator  47.98 
 
 		 256 aa  198  6e-50  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.00211389  normal  0.244563 
 
 
-
 
NC_013441  Gbro_0997  response regulator receiver  43.56 
 
 		 228 aa  197  7.999999999999999e-50  Gordonia bronchialis DSM 43247  Bacteria  normal  1  n/a   
 
 
-
 
NC_010184  BcerKBAB4_5259  two component transcriptional regulator  46.09 
 
 		 235 aa  197  9e-50  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.000559572  n/a   
 
 
-
 
NC_014210  Ndas_4322  two component transcriptional regulator, winged helix family  46.19 
 
 		 231 aa  197  1.0000000000000001e-49  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011772  BCG9842_B5346  DNA-binding response regulator YycF  46.52 
 
 		 235 aa  197  1.0000000000000001e-49  Bacillus cereus G9842  Bacteria  hitchhiker  0.000000234523  hitchhiker  0.00000000000323141 
 
 
-
 
NC_013169  Ksed_08590  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  45.91 
 
 		 239 aa  197  1.0000000000000001e-49  Kytococcus sedentarius DSM 20547  Bacteria  normal  1  normal  0.857083 
 
 
-
 
NC_010424  Daud_1897  two component transcriptional regulator  47.53 
 
 		 227 aa  197  1.0000000000000001e-49  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.151466  n/a   
 
 
-
 
NC_010424  Daud_1419  two component transcriptional regulator  46.46 
 
 		 231 aa  197  1.0000000000000001e-49  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.0720218  n/a   
 
 
-
 
NC_008578  Acel_0088  two component transcriptional regulator  45.81 
 
 		 228 aa  197  1.0000000000000001e-49  Acidothermus cellulolyticus 11B  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002936  DET0135  DNA-binding response regulator  46.9 
 
 		 230 aa  196  2.0000000000000003e-49  Dehalococcoides ethenogenes 195  Bacteria  normal  1  n/a   
 
 
-
 
NC_013510  Tcur_4043  two component transcriptional regulator, winged helix family  47.53 
 
 		 225 aa  196  2.0000000000000003e-49  Thermomonospora curvata DSM 43183  Bacteria  normal  0.728877  n/a   
 
 
-
 
NC_013093  Amir_6749  two component transcriptional regulator, winged helix family  44.39 
 
 		 226 aa  196  2.0000000000000003e-49  Actinosynnema mirum DSM 43827  Bacteria  normal  0.290774  n/a   
 
 
-
 
NC_013216  Dtox_2915  two component transcriptional regulator, winged helix family  48.44 
 
 		 225 aa  196  2.0000000000000003e-49  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.892207  normal  0.300351 
 
 
-
 
NC_007333  Tfu_2496  response regulator receiver  46.19 
 
 		 225 aa  196  2.0000000000000003e-49  Thermobifida fusca YX  Bacteria  normal  0.491467  n/a   
 
 
-
 
NC_010320  Teth514_0588  two component transcriptional regulator  48.21 
 
 		 227 aa  196  2.0000000000000003e-49  Thermoanaerobacter sp. X514  Bacteria  unclonable  0.000000000451147  n/a   
 
 
-
 
NC_008148  Rxyl_0378  two component transcriptional regulator  45.26 
 
 		 234 aa  196  2.0000000000000003e-49  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_009674  Bcer98_4006  two component transcriptional regulator  46.09 
 
 		 235 aa  197  2.0000000000000003e-49  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.010356  n/a   
 
 
-
 
NC_013174  Jden_1827  two component transcriptional regulator, winged helix family  47.09 
 
 		 227 aa  196  2.0000000000000003e-49  Jonesia denitrificans DSM 20603  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009012  Cthe_2333  two component transcriptional regulator  45.58 
 
 		 232 aa  197  2.0000000000000003e-49  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_013093  Amir_6310  two component transcriptional regulator, winged helix family  46.19 
 
 		 261 aa  196  3e-49  Actinosynnema mirum DSM 43827  Bacteria  normal  0.534044  n/a   
 
 
-
 
NC_011725  BCB4264_A5589  DNA-binding response regulator YycF  46.09 
 
 		 235 aa  196  3e-49  Bacillus cereus B4264  Bacteria  normal  0.0469644  n/a   
 
 
-
 
NC_008740  Maqu_1007  two component transcriptional regulator  45.92 
 
 		 233 aa  196  3e-49  Marinobacter aquaeolei VT8  Bacteria  normal  1  n/a   
 
 
-
 
NC_009674  Bcer98_2250  two component transcriptional regulator  46.93 
 
 		 225 aa  195  4.0000000000000005e-49  Bacillus cytotoxicus NVH 391-98  Bacteria  decreased coverage  0.00000295266  n/a   
 
 
-
 
NC_011772  BCG9842_B2796  DNA-binding response regulator  45.65 
 
 		 231 aa  195  5.000000000000001e-49  Bacillus cereus G9842  Bacteria  normal  0.512352  hitchhiker  0.00000533196 
 
 
-
 
NC_007908  Rfer_0510  two component transcriptional regulator  43.61 
 
 		 234 aa  195  5.000000000000001e-49  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_005957  BT9727_5147  response regulator  46.09 
 
 		 235 aa  195  6e-49  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00168683  n/a   
 
 
-
 
NC_011773  BCAH820_5572  DNA-binding response regulator YycF  46.09 
 
 		 235 aa  195  6e-49  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.81316e-29 
 
 
-
 
NC_006274  BCZK5163  response regulator  46.09 
 
 		 235 aa  195  6e-49  Bacillus cereus E33L  Bacteria  hitchhiker  0.00196509  n/a   
 
 
-
 
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