27 homologs were found in PanDaTox collection
for query gene DhcVS_78 on replicon NC_013552
Organism: Dehalococcoides sp. VS



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013552  DhcVS_78  tetrapyrrole methylase, precorrin-6Y C5,15-methyltransferase  100 
 
 
240 aa  492  9.999999999999999e-139  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_002936  DET0240  tetrapyrrole methylase family protein  94.58 
 
 
240 aa  472  1e-132  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_013552  DhcVS_68  cobalamin-binding protein  36.65 
 
 
517 aa  135  7.000000000000001e-31  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_002936  DET0296  precorrin-6Y C5,15-methyltransferase, putative  39.35 
 
 
166 aa  103  2e-21  Dehalococcoides ethenogenes 195  Bacteria  normal  0.368136  n/a   
 
 
-
 
NC_009635  Maeo_0874  cobalt-precorrin-6Y C(5)-methyltransferase  23.42 
 
 
206 aa  55.8  0.0000005  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_010320  Teth514_0310  precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit  23.7 
 
 
203 aa  55.5  0.0000007  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_013743  Htur_1003  precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit  28.32 
 
 
269 aa  53.1  0.000004  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_009637  MmarC7_0473  cobalt-precorrin-6Y C(5)-methyltransferase  23.87 
 
 
208 aa  52.8  0.000004  Methanococcus maripaludis C7  Archaea  normal  0.871662  normal 
 
 
-
 
NC_011666  Msil_3262  precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit  28.57 
 
 
413 aa  50.1  0.00004  Methylocella silvestris BL2  Bacteria  n/a    normal  0.059771 
 
 
-
 
NC_009634  Mevan_0540  cobalt-precorrin-6Y C(5)-methyltransferase  22.67 
 
 
228 aa  49.3  0.00005  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_010581  Bind_3513  precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit  24.76 
 
 
408 aa  49.3  0.00005  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.462686 
 
 
-
 
NC_013202  Hmuk_1857  cobalt-precorrin-6Y C(5)-methyltransferase  26.7 
 
 
252 aa  49.3  0.00006  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal  0.323877 
 
 
-
 
NC_013517  Sterm_1010  precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit  24.51 
 
 
207 aa  48.1  0.0001  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_3502  precorrin-2 C20-methyltransferase  23.87 
 
 
234 aa  48.1  0.0001  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.00000438049  n/a   
 
 
-
 
NC_009135  MmarC5_0364  cobalt-precorrin-6Y C(5)-methyltransferase  22.97 
 
 
208 aa  47.4  0.0002  Methanococcus maripaludis C5  Archaea  normal  0.0392216  n/a   
 
 
-
 
NC_009975  MmarC6_1446  cobalt-precorrin-6Y C(5)-methyltransferase  22.52 
 
 
208 aa  47.4  0.0002  Methanococcus maripaludis C6  Archaea  normal  n/a   
 
 
-
 
NC_010085  Nmar_0005  precorrin-6y C5,15-methyltransferase subunit CbiE  22.13 
 
 
238 aa  47  0.0003  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal 
 
 
-
 
NC_009455  DehaBAV1_0298  hypothetical protein  36.84 
 
 
95 aa  45.8  0.0006  Dehalococcoides sp. BAV1  Bacteria  hitchhiker  0.00000376041  n/a   
 
 
-
 
NC_011059  Paes_1289  precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit  28.85 
 
 
400 aa  45.8  0.0006  Prosthecochloris aestuarii DSM 271  Bacteria  normal  normal 
 
 
-
 
NC_009952  Dshi_0173  decarboxylating precorrin-6Y C(5,15)-methyltransferase  26.9 
 
 
400 aa  45.1  0.0009  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.0402881  normal 
 
 
-
 
NC_009073  Pcal_1528  cobalt-precorrin-6Y C(5)-methyltransferase  31.33 
 
 
211 aa  43.5  0.003  Pyrobaculum calidifontis JCM 11548  Archaea  n/a    hitchhiker  0.00214205 
 
 
-
 
NC_010085  Nmar_0058  precorrin-2 C20-methyltransferase  22.45 
 
 
240 aa  42.7  0.004  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal 
 
 
-
 
NC_007498  Pcar_2739  precorrin-6Y C5,15-methyltransferase  23.9 
 
 
403 aa  43.1  0.004  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.393773  n/a   
 
 
-
 
NC_012030  Hlac_3459  cobalt-precorrin-6Y C(5)-methyltransferase  24.89 
 
 
262 aa  42.4  0.006  Halorubrum lacusprofundi ATCC 49239  Archaea  n/a    n/a   
 
 
-
 
NC_007643  Rru_A2992  precorrin-6Y C5,15-methyltransferase (decarboxylating)  29.32 
 
 
408 aa  42.4  0.007  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_0569  precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit  26.39 
 
 
408 aa  42  0.008  Roseiflexus sp. RS-1  Bacteria  normal  0.334509  normal 
 
 
-
 
NC_011769  DvMF_1175  precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit  29.41 
 
 
474 aa  42  0.009  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
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