More than 300 homologs were found in PanDaTox collection
for query gene DhcVS_565 on replicon NC_013552
Organism: Dehalococcoides sp. VS



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013552  DhcVS_565  response regulator receiver:metal-dependent phosphohydrolase, HD subdomain protein  100 
 
 
334 aa  688    Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_002936  DET0624  response regulator  90.42 
 
 
334 aa  632  1e-180  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_009455  DehaBAV1_0597  response regulator receiver modulated metal dependent phosphohydrolase  90.72 
 
 
334 aa  630  1e-180  Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_1919  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  46.65 
 
 
350 aa  305  6e-82  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.179225 
 
 
-
 
NC_002939  GSU1654  response regulator, putative  46.25 
 
 
349 aa  301  7.000000000000001e-81  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_013552  DhcVS_1406  response regulator  45.97 
 
 
351 aa  284  2.0000000000000002e-75  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_2407  response regulator receiver modulated metal dependent phosphohydrolase  42.64 
 
 
347 aa  280  3e-74  Geobacter bemidjiensis Bem  Bacteria  normal  0.21688  n/a   
 
 
-
 
NC_009483  Gura_2374  response regulator receiver modulated metal dependent phosphohydrolase  42.81 
 
 
348 aa  279  5e-74  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_1378  response regulator receiver modulated metal dependent phosphohydrolase  43.94 
 
 
348 aa  276  3e-73  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.00581699  n/a   
 
 
-
 
NC_012918  GM21_1811  response regulator receiver modulated metal dependent phosphohydrolase  42.34 
 
 
347 aa  276  5e-73  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00843757 
 
 
-
 
NC_010424  Daud_0677  response regulator receiver modulated metal dependent phosphohydrolase  42.69 
 
 
343 aa  266  2.9999999999999995e-70  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.756866  n/a   
 
 
-
 
NC_007760  Adeh_1829  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  39.76 
 
 
357 aa  251  8.000000000000001e-66  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_2101  response regulator receiver modulated metal dependent phosphohydrolase  39.76 
 
 
357 aa  249  6e-65  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_2031  response regulator receiver modulated metal dependent phosphohydrolase  39.76 
 
 
357 aa  249  6e-65  Anaeromyxobacter sp. K  Bacteria  normal  0.306573  n/a   
 
 
-
 
NC_009675  Anae109_1991  response regulator receiver modulated metal dependent phosphohydrolase  37.8 
 
 
357 aa  241  2e-62  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_0702  response regulator receiver modulated metal dependent phosphohydrolase  39.82 
 
 
331 aa  234  2.0000000000000002e-60  Roseiflexus sp. RS-1  Bacteria  normal  0.140022  normal 
 
 
-
 
NC_008009  Acid345_2498  response regulator receiver modulated metal dependent phosphohydrolase  38.02 
 
 
367 aa  228  1e-58  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.751736 
 
 
-
 
NC_009767  Rcas_0298  response regulator receiver modulated metal dependent phosphohydrolase  38.7 
 
 
331 aa  219  7e-56  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.7054  normal  0.177262 
 
 
-
 
NC_009486  Tpet_0995  metal dependent phosphohydrolase  55.56 
 
 
547 aa  218  1e-55  Thermotoga petrophila RKU-1  Bacteria  normal  0.656707  n/a   
 
 
-
 
NC_010483  TRQ2_1135  metal dependent phosphohydrolase  55.56 
 
 
547 aa  218  1e-55  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2645  response regulator receiver modulated metal dependent phosphohydrolase  35.36 
 
 
364 aa  218  1e-55  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_2904  histidine kinase  37.5 
 
 
876 aa  211  1e-53  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.0209815 
 
 
-
 
NC_013173  Dbac_2325  response regulator receiver modulated metal dependent phosphohydrolase  34.2 
 
 
362 aa  207  2e-52  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.663275  n/a   
 
 
-
 
NC_009972  Haur_2699  response regulator receiver modulated metal dependent phosphohydrolase  36.42 
 
 
328 aa  205  8e-52  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_1201  metal dependent phosphohydrolase  52.97 
 
 
719 aa  199  3.9999999999999996e-50  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_0032  putative PAS/PAC sensor protein  51.35 
 
 
632 aa  198  1.0000000000000001e-49  Thermoanaerobacter sp. X514  Bacteria  normal  0.0790714  n/a   
 
 
-
 
NC_010483  TRQ2_0762  response regulator receiver modulated metal dependent phosphohydrolase  34.72 
 
 
368 aa  197  2.0000000000000003e-49  Thermotoga sp. RQ2  Bacteria  normal  0.218112  n/a   
 
 
-
 
NC_002939  GSU1007  GAF domain/HD domain-containing protein  50.8 
 
 
550 aa  197  3e-49  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_2150  metal dependent phosphohydrolase  51.89 
 
 
718 aa  194  2e-48  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal  0.070124 
 
 
-
 
NC_011830  Dhaf_0459  metal dependent phosphohydrolase  43.44 
 
 
428 aa  192  5e-48  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_4027  response regulator receiver modulated metal dependent phosphohydrolase  35.45 
 
 
346 aa  191  2e-47  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.0000000247639  n/a   
 
 
-
 
NC_009943  Dole_2174  response regulator receiver modulated metal dependent phosphohydrolase  35.06 
 
 
474 aa  190  2.9999999999999997e-47  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_1474  response regulator receiver modulated metal dependent phosphohydrolase  34.53 
 
 
345 aa  190  2.9999999999999997e-47  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_0738  response regulator receiver modulated metal dependent phosphohydrolase  34.42 
 
 
368 aa  190  4e-47  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_1285  metal dependent phosphohydrolase  51.69 
 
 
465 aa  189  5e-47  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_1889  metal dependent phosphohydrolase  47.87 
 
 
487 aa  189  5.999999999999999e-47  Clostridium cellulolyticum H10  Bacteria  normal  0.562954  n/a   
 
 
-
 
NC_007298  Daro_3285  response regulator receiver  36.06 
 
 
362 aa  189  8e-47  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_002936  DET1381  GGDEF domain/HD domain-containing protein  49.46 
 
 
792 aa  188  1e-46  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_0639  response regulator receiver modulated metal dependent phosphohydrolase  34.77 
 
 
345 aa  187  2e-46  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_2457  metal dependent phosphohydrolase  31.52 
 
 
358 aa  187  2e-46  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_4196  response regulator receiver modulated metal dependent phosphohydrolase  35.24 
 
 
350 aa  187  2e-46  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_2505  response regulator receiver modulated metal dependent phosphohydrolase  36.7 
 
 
331 aa  186  5e-46  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_3257  response regulator receiver modulated metal dependent phosphohydrolase  31.98 
 
 
358 aa  186  7e-46  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2559  metal dependent phosphohydrolase  46.03 
 
 
553 aa  185  8e-46  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.000107172 
 
 
-
 
NC_011146  Gbem_0080  response regulator receiver modulated metal dependent phosphohydrolase  31.86 
 
 
357 aa  185  1.0000000000000001e-45  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_002936  DET1049  HD domain-containing protein  46.73 
 
 
311 aa  184  2.0000000000000003e-45  Dehalococcoides ethenogenes 195  Bacteria  hitchhiker  0.0090576  n/a   
 
 
-
 
NC_013552  DhcVS_1162  GGDEF domain protein  48.91 
 
 
836 aa  184  2.0000000000000003e-45  Dehalococcoides sp. VS  Bacteria  normal  0.359678  n/a   
 
 
-
 
NC_007517  Gmet_2999  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  35.01 
 
 
361 aa  184  2.0000000000000003e-45  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.669597 
 
 
-
 
NC_008321  Shewmr4_0792  response regulator receiver modulated metal dependent phosphohydrolase  35.56 
 
 
331 aa  184  2.0000000000000003e-45  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3231  response regulator receiver modulated metal dependent phosphohydrolase  35.56 
 
 
331 aa  184  2.0000000000000003e-45  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009455  DehaBAV1_1191  diguanylate cyclase with GAF sensor  50.29 
 
 
841 aa  184  2.0000000000000003e-45  Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_3074  response regulator receiver modulated metal dependent phosphohydrolase  31.6 
 
 
363 aa  183  3e-45  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_012918  GM21_0063  response regulator receiver modulated metal dependent phosphohydrolase  32.06 
 
 
357 aa  183  3e-45  Geobacter sp. M21  Bacteria  n/a    hitchhiker  2.56416e-22 
 
 
-
 
NC_007644  Moth_1469  metal dependent phosphohydrolase  40.7 
 
 
326 aa  183  4.0000000000000006e-45  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.664094  normal 
 
 
-
 
NC_013946  Mrub_2733  response regulator receiver modulated metal dependent phosphohydrolase  35.95 
 
 
346 aa  182  5.0000000000000004e-45  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_0863  response regulator receiver modulated metal dependent phosphohydrolase  33.43 
 
 
351 aa  182  5.0000000000000004e-45  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.297515  normal  0.141829 
 
 
-
 
NC_011661  Dtur_1217  metal dependent phosphohydrolase  48.11 
 
 
371 aa  182  5.0000000000000004e-45  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0653  response regulator receiver modulated metal dependent phosphohydrolase  34.56 
 
 
345 aa  182  1e-44  Geobacter sp. M21  Bacteria  n/a    hitchhiker  2.6785900000000002e-24 
 
 
-
 
NC_008009  Acid345_0504  response regulator receiver modulated metal dependent phosphohydrolase  31.74 
 
 
427 aa  181  2e-44  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_3676  response regulator receiver modulated metal dependent phosphohydrolase  36.9 
 
 
328 aa  181  2e-44  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_2248  response regulator receiver modulated metal dependent phosphohydrolase  35.26 
 
 
331 aa  180  2.9999999999999997e-44  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_3334  response regulator receiver modulated metal dependent phosphohydrolase  35.06 
 
 
331 aa  180  2.9999999999999997e-44  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_0907  metal dependent phosphohydrolase  45.36 
 
 
548 aa  179  4e-44  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_3292  response regulator receiver modulated metal dependent phosphohydrolase  51.1 
 
 
502 aa  180  4e-44  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.652795 
 
 
-
 
NC_009654  Mmwyl1_1086  response regulator receiver modulated metal dependent phosphohydrolase  34.65 
 
 
331 aa  179  4.999999999999999e-44  Marinomonas sp. MWYL1  Bacteria  normal  0.226857  hitchhiker  0.0000000112469 
 
 
-
 
NC_008554  Sfum_3738  response regulator receiver modulated metal dependent phosphohydrolase  35.24 
 
 
384 aa  179  4.999999999999999e-44  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_0885  response regulator receiver modulated metal dependent phosphohydrolase  32.92 
 
 
324 aa  178  1e-43  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_0129  metal dependent phosphohydrolase  50 
 
 
505 aa  178  1e-43  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU2094  response regulator  32.3 
 
 
329 aa  177  2e-43  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_1196  response regulator receiver modulated metal dependent phosphohydrolase  33.33 
 
 
375 aa  177  2e-43  Anaeromyxobacter sp. K  Bacteria  normal  0.318732  n/a   
 
 
-
 
NC_010814  Glov_2722  response regulator receiver modulated metal dependent phosphohydrolase  34.71 
 
 
378 aa  177  2e-43  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_1688  metal dependent phosphohydrolase  51.81 
 
 
648 aa  177  3e-43  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_3375  response regulator receiver modulated metal dependent phosphohydrolase  32.42 
 
 
324 aa  177  3e-43  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009943  Dole_1136  response regulator receiver modulated metal dependent phosphohydrolase  32.93 
 
 
348 aa  176  4e-43  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_1265  response regulator receiver modulated metal dependent phosphohydrolase  33.33 
 
 
375 aa  176  4e-43  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.297476  n/a   
 
 
-
 
NC_012560  Avin_25160  response regulator  35.54 
 
 
356 aa  176  5e-43  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_3723  response regulator receiver  34.97 
 
 
338 aa  176  5e-43  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_1875  response regulator receiver modulated metal dependent phosphohydrolase  31.71 
 
 
361 aa  176  5e-43  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_0338  response regulator receiver modulated metal dependent phosphohydrolase  45.16 
 
 
513 aa  175  9.999999999999999e-43  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.102838 
 
 
-
 
NC_009253  Dred_2727  metal dependent phosphohydrolase  46.7 
 
 
387 aa  174  9.999999999999999e-43  Desulfotomaculum reducens MI-1  Bacteria  normal  0.328155  n/a   
 
 
-
 
NC_007298  Daro_0970  response regulator receiver  31.28 
 
 
438 aa  174  1.9999999999999998e-42  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_4270  response regulator receiver modulated metal dependent phosphohydrolase  32.15 
 
 
361 aa  173  2.9999999999999996e-42  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_0458  metal dependent phosphohydrolase  46.6 
 
 
512 aa  174  2.9999999999999996e-42  Ammonifex degensii KC4  Bacteria  normal  0.079509  n/a   
 
 
-
 
NC_007413  Ava_1777  metal dependent phosphohydrolase, HD region with response regulator receiver modulation  33.11 
 
 
414 aa  173  3.9999999999999995e-42  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_1980  response regulator receiver modulated metal dependent phosphohydrolase  29.91 
 
 
449 aa  172  5e-42  Rhodoferax ferrireducens T118  Bacteria  normal  0.247955  n/a   
 
 
-
 
NC_010718  Nther_2059  metal dependent phosphohydrolase  47.8 
 
 
430 aa  173  5e-42  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  hitchhiker  0.0000152605  hitchhiker  0.00000484417 
 
 
-
 
NC_013522  Taci_1739  response regulator receiver modulated metal dependent phosphohydrolase  32.47 
 
 
362 aa  172  5.999999999999999e-42  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  0.0711596  n/a   
 
 
-
 
NC_010424  Daud_0538  diguanylate cyclase with PAS/PAC sensor  50.27 
 
 
860 aa  172  5.999999999999999e-42  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.883741  n/a   
 
 
-
 
NC_014148  Plim_1575  metal-dependent phosphohydrolase HD sub domain protein  49.17 
 
 
561 aa  172  6.999999999999999e-42  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.874521  n/a   
 
 
-
 
NC_010424  Daud_0771  diguanylate cyclase with PAS/PAC sensor  50.27 
 
 
880 aa  172  6.999999999999999e-42  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_2395  response regulator receiver modulated metal dependent phosphohydrolase  47.37 
 
 
491 aa  172  7.999999999999999e-42  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.357639  normal  0.166027 
 
 
-
 
NC_011769  DvMF_1513  metal dependent phosphohydrolase  50 
 
 
294 aa  171  1e-41  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_009675  Anae109_1184  response regulator receiver modulated metal dependent phosphohydrolase  33.53 
 
 
394 aa  171  1e-41  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.185308 
 
 
-
 
NC_013205  Aaci_0362  metal dependent phosphohydrolase  42.02 
 
 
518 aa  171  1e-41  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_2131  metal dependent phosphohydrolase  48.28 
 
 
331 aa  171  2e-41  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.00000504483  normal  0.911258 
 
 
-
 
NC_010424  Daud_0679  metal dependent phosphohydrolase  49.73 
 
 
571 aa  171  2e-41  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_0568  metal dependent phosphohydrolase  47.06 
 
 
495 aa  171  2e-41  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.17826  n/a   
 
 
-
 
NC_013522  Taci_1373  response regulator receiver modulated metal dependent phosphohydrolase  32.95 
 
 
365 aa  170  3e-41  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_014148  Plim_0679  response regulator receiver  34.22 
 
 
337 aa  170  3e-41  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.0836964  n/a   
 
 
-
 
NC_009012  Cthe_1378  response regulator receiver modulated metal dependent phosphohydrolase  46.41 
 
 
506 aa  170  3e-41  Clostridium thermocellum ATCC 27405  Bacteria  unclonable  0.0000000458361  n/a   
 
 
-
 
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