More than 300 homologs were found in PanDaTox collection
for query gene DhcVS_1406 on replicon NC_013552
Organism: Dehalococcoides sp. VS



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013552  DhcVS_1406  response regulator  100 
 
 
351 aa  716    Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_2407  response regulator receiver modulated metal dependent phosphohydrolase  45.73 
 
 
347 aa  302  5.000000000000001e-81  Geobacter bemidjiensis Bem  Bacteria  normal  0.21688  n/a   
 
 
-
 
NC_012918  GM21_1811  response regulator receiver modulated metal dependent phosphohydrolase  44.88 
 
 
347 aa  296  3e-79  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00843757 
 
 
-
 
NC_011146  Gbem_0080  response regulator receiver modulated metal dependent phosphohydrolase  42.94 
 
 
357 aa  296  5e-79  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0063  response regulator receiver modulated metal dependent phosphohydrolase  42.37 
 
 
357 aa  293  3e-78  Geobacter sp. M21  Bacteria  n/a    hitchhiker  2.56416e-22 
 
 
-
 
NC_002936  DET0624  response regulator  45.95 
 
 
334 aa  290  2e-77  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1654  response regulator, putative  43.94 
 
 
349 aa  290  3e-77  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2374  response regulator receiver modulated metal dependent phosphohydrolase  44.94 
 
 
348 aa  288  1e-76  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_4270  response regulator receiver modulated metal dependent phosphohydrolase  43.71 
 
 
361 aa  286  4e-76  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_013552  DhcVS_565  response regulator receiver:metal-dependent phosphohydrolase, HD subdomain protein  45.97 
 
 
334 aa  284  2.0000000000000002e-75  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_009455  DehaBAV1_0597  response regulator receiver modulated metal dependent phosphohydrolase  46.87 
 
 
334 aa  284  2.0000000000000002e-75  Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2325  response regulator receiver modulated metal dependent phosphohydrolase  40.66 
 
 
362 aa  280  2e-74  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.663275  n/a   
 
 
-
 
NC_007517  Gmet_1919  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  42.47 
 
 
350 aa  279  4e-74  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.179225 
 
 
-
 
NC_008609  Ppro_3046  response regulator receiver modulated metal dependent phosphohydrolase  41.49 
 
 
365 aa  276  4e-73  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0429754  n/a   
 
 
-
 
NC_009438  Sputcn32_3141  response regulator receiver modulated metal dependent phosphohydrolase  43.55 
 
 
338 aa  272  8.000000000000001e-72  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1891  response regulator  40.62 
 
 
379 aa  271  1e-71  Geobacter sulfurreducens PCA  Bacteria  normal  0.750204  n/a   
 
 
-
 
NC_008345  Sfri_2505  response regulator receiver modulated metal dependent phosphohydrolase  44.35 
 
 
331 aa  269  4e-71  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_0792  response regulator receiver modulated metal dependent phosphohydrolase  43.68 
 
 
331 aa  269  5.9999999999999995e-71  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3231  response regulator receiver modulated metal dependent phosphohydrolase  43.68 
 
 
331 aa  269  5.9999999999999995e-71  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_013216  Dtox_4196  response regulator receiver modulated metal dependent phosphohydrolase  45.27 
 
 
350 aa  268  1e-70  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_0716  response regulator receiver modulated metal dependent phosphohydrolase  42.98 
 
 
338 aa  267  2e-70  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3306  response regulator receiver modulated metal dependent phosphohydrolase  42.98 
 
 
338 aa  267  2e-70  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_3334  response regulator receiver modulated metal dependent phosphohydrolase  43.52 
 
 
331 aa  267  2e-70  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_3418  response regulator receiver modulated metal dependent phosphohydrolase  42.98 
 
 
338 aa  267  2e-70  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_2498  response regulator receiver modulated metal dependent phosphohydrolase  43.54 
 
 
367 aa  266  2.9999999999999995e-70  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.751736 
 
 
-
 
NC_012560  Avin_25160  response regulator  43.8 
 
 
356 aa  266  4e-70  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_2248  response regulator receiver modulated metal dependent phosphohydrolase  44.61 
 
 
331 aa  263  4.999999999999999e-69  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_1991  response regulator receiver modulated metal dependent phosphohydrolase  41.21 
 
 
357 aa  261  1e-68  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_007760  Adeh_1829  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  41.82 
 
 
357 aa  260  2e-68  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_1378  response regulator receiver modulated metal dependent phosphohydrolase  41.39 
 
 
348 aa  260  2e-68  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.00581699  n/a   
 
 
-
 
NC_008346  Swol_1041  response regulator receiver protein  43.03 
 
 
365 aa  260  3e-68  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU2574  response regulator  41.62 
 
 
368 aa  259  4e-68  Geobacter sulfurreducens PCA  Bacteria  normal  0.482084  n/a   
 
 
-
 
NC_004347  SO_0860  response regulator  41.95 
 
 
339 aa  259  5.0000000000000005e-68  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011138  MADE_01756  Response regulator CheB (receptor modification enzyme, protein-glutamate methylesterase)  42.45 
 
 
337 aa  259  6e-68  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.844049  n/a   
 
 
-
 
NC_009654  Mmwyl1_1086  response regulator receiver modulated metal dependent phosphohydrolase  43.06 
 
 
331 aa  259  7e-68  Marinomonas sp. MWYL1  Bacteria  normal  0.226857  hitchhiker  0.0000000112469 
 
 
-
 
NC_008740  Maqu_3676  response regulator receiver modulated metal dependent phosphohydrolase  43.06 
 
 
328 aa  258  8e-68  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_2951  response regulator receiver protein  42.12 
 
 
340 aa  258  1e-67  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.129077 
 
 
-
 
NC_007298  Daro_0007  response regulator receiver modulated metal dependent phosphohydrolase  43.3 
 
 
379 aa  256  3e-67  Dechloromonas aromatica RCB  Bacteria  normal  0.829613  normal  0.0284762 
 
 
-
 
NC_009052  Sbal_3504  response regulator receiver modulated metal dependent phosphohydrolase  42 
 
 
338 aa  256  5e-67  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_0859  response regulator receiver modulated metal dependent phosphohydrolase  42 
 
 
338 aa  256  5e-67  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_0836  response regulator receiver modulated metal dependent phosphohydrolase  41.71 
 
 
338 aa  256  6e-67  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_2031  response regulator receiver modulated metal dependent phosphohydrolase  41.21 
 
 
357 aa  255  6e-67  Anaeromyxobacter sp. K  Bacteria  normal  0.306573  n/a   
 
 
-
 
NC_011891  A2cp1_2101  response regulator receiver modulated metal dependent phosphohydrolase  41.21 
 
 
357 aa  255  6e-67  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_0871  response regulator receiver modulated metal dependent phosphohydrolase  42 
 
 
338 aa  255  8e-67  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_2017  response regulator receiver modulated metal dependent phosphohydrolase  41.93 
 
 
379 aa  254  1.0000000000000001e-66  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.98115  n/a   
 
 
-
 
NC_008576  Mmc1_3408  response regulator receiver modulated metal dependent phosphohydrolase  42.69 
 
 
346 aa  254  1.0000000000000001e-66  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_0187  response regulator receiver modulated metal dependent phosphohydrolase  42.58 
 
 
354 aa  254  2.0000000000000002e-66  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.0125166 
 
 
-
 
NC_007954  Sden_3723  response regulator receiver  41.71 
 
 
338 aa  254  2.0000000000000002e-66  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_3165  response regulator receiver modulated metal dependent phosphohydrolase  39.4 
 
 
367 aa  251  1e-65  Magnetococcus sp. MC-1  Bacteria  normal  0.0569095  normal  0.0154692 
 
 
-
 
NC_011662  Tmz1t_1183  response regulator receiver modulated metal dependent phosphohydrolase  42.12 
 
 
363 aa  251  2e-65  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_3111  response regulator receiver protein  43.48 
 
 
328 aa  250  2e-65  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.0637882 
 
 
-
 
NC_009654  Mmwyl1_0356  response regulator receiver modulated metal dependent phosphohydrolase  43.3 
 
 
360 aa  249  6e-65  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009486  Tpet_0738  response regulator receiver modulated metal dependent phosphohydrolase  41.09 
 
 
368 aa  249  7e-65  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1546  response regulator receiver modulated metal dependent phosphohydrolase  41.19 
 
 
368 aa  248  1e-64  Geobacter lovleyi SZ  Bacteria  normal  0.61009  n/a   
 
 
-
 
NC_010483  TRQ2_0762  response regulator receiver modulated metal dependent phosphohydrolase  39.88 
 
 
368 aa  248  1e-64  Thermotoga sp. RQ2  Bacteria  normal  0.218112  n/a   
 
 
-
 
NC_009092  Shew_3199  response regulator receiver modulated metal dependent phosphohydrolase  41.19 
 
 
339 aa  243  3e-63  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_007954  Sden_0663  response regulator receiver  41.83 
 
 
340 aa  243  3e-63  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_50640  response regulator with metal dependent phosphohydrolase activity (two-component)  41.83 
 
 
347 aa  242  6e-63  Azotobacter vinelandii DJ  Bacteria  normal  0.121542  n/a   
 
 
-
 
NC_010506  Swoo_3313  response regulator receiver modulated metal dependent phosphohydrolase  42 
 
 
343 aa  241  1e-62  Shewanella woodyi ATCC 51908  Bacteria  normal  hitchhiker  0.00000482447 
 
 
-
 
NC_009901  Spea_0629  response regulator receiver modulated metal dependent phosphohydrolase  40.69 
 
 
339 aa  240  2.9999999999999997e-62  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_0481  response regulator receiver modulated metal dependent phosphohydrolase  42.57 
 
 
348 aa  240  2.9999999999999997e-62  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3549  response regulator receiver modulated metal dependent phosphohydrolase  42.29 
 
 
348 aa  240  2.9999999999999997e-62  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_2902  response regulator receiver  40.46 
 
 
350 aa  239  4e-62  Dechloromonas aromatica RCB  Bacteria  normal  0.1984  normal  0.246098 
 
 
-
 
NC_010002  Daci_6015  response regulator receiver modulated metal dependent phosphohydrolase  40.63 
 
 
333 aa  239  5.999999999999999e-62  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_3285  response regulator receiver  40.17 
 
 
362 aa  238  1e-61  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_1136  response regulator receiver modulated metal dependent phosphohydrolase  40 
 
 
348 aa  235  1.0000000000000001e-60  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_008741  Dvul_3024  response regulator receiver modulated metal dependent phosphohydrolase  36.34 
 
 
363 aa  234  2.0000000000000002e-60  Desulfovibrio vulgaris DP4  Bacteria  normal  0.433593  n/a   
 
 
-
 
NC_003910  CPS_4164  response regulator/phosphatase  43.34 
 
 
352 aa  231  2e-59  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_2722  response regulator receiver modulated metal dependent phosphohydrolase  38.35 
 
 
378 aa  229  4e-59  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_3523  response regulator receiver modulated metal dependent phosphohydrolase  40.06 
 
 
363 aa  229  5e-59  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_1911  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  44.78 
 
 
268 aa  228  1e-58  Thiomicrospira crunogena XCL-2  Bacteria  normal  0.0445959  n/a   
 
 
-
 
NC_011901  Tgr7_0081  two component transcriptional regulator, AraC family  36.6 
 
 
399 aa  226  4e-58  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_0479  response regulator receiver modulated metal dependent phosphohydrolase  41.26 
 
 
350 aa  226  6e-58  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_0148  response regulator receiver modulated metal dependent phosphohydrolase  36.63 
 
 
385 aa  225  8e-58  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.750781  n/a   
 
 
-
 
NC_009457  VC0395_A0963  response regulator  38.75 
 
 
441 aa  225  9e-58  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_2179  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  40.92 
 
 
348 aa  223  3e-57  Thiomicrospira crunogena XCL-2  Bacteria  normal  0.378064  n/a   
 
 
-
 
NC_007575  Suden_1924  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  38.75 
 
 
367 aa  223  4.9999999999999996e-57  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  0.620973  n/a   
 
 
-
 
NC_013512  Sdel_0912  metal-dependent phosphohydrolase HD sub domain protein  37.85 
 
 
371 aa  223  4.9999999999999996e-57  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_2655  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  39.4 
 
 
353 aa  222  8e-57  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_2670  metal dependent phosphohydrolase, HD region  37.57 
 
 
344 aa  221  9.999999999999999e-57  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_013223  Dret_2370  response regulator receiver modulated metal dependent phosphohydrolase  38.15 
 
 
370 aa  221  1.9999999999999999e-56  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_1613  response regulator receiver modulated metal dependent phosphohydrolase  38.05 
 
 
487 aa  220  3e-56  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.350204  hitchhiker  0.000130728 
 
 
-
 
NC_011757  Mchl_0150  response regulator receiver modulated metal dependent phosphohydrolase  38.15 
 
 
369 aa  219  5e-56  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.245203 
 
 
-
 
NC_010172  Mext_0206  metal-dependent phosphohydrolase  38.15 
 
 
369 aa  219  5e-56  Methylobacterium extorquens PA1  Bacteria  normal  0.44114  normal  0.760724 
 
 
-
 
NC_007517  Gmet_2999  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  37.26 
 
 
361 aa  218  7.999999999999999e-56  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.669597 
 
 
-
 
NC_011769  DvMF_3074  response regulator receiver modulated metal dependent phosphohydrolase  35.63 
 
 
363 aa  219  7.999999999999999e-56  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_010725  Mpop_3894  response regulator receiver modulated metal dependent phosphohydrolase  36.55 
 
 
353 aa  219  7.999999999999999e-56  Methylobacterium populi BJ001  Bacteria  normal  0.0109719  normal  0.416002 
 
 
-
 
NC_009654  Mmwyl1_2382  response regulator receiver modulated metal dependent phosphohydrolase  38.2 
 
 
359 aa  219  7.999999999999999e-56  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_1097  response regulator receiver modulated metal dependent phosphohydrolase  37.03 
 
 
391 aa  218  8.999999999999998e-56  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.151318 
 
 
-
 
NC_008576  Mmc1_2945  response regulator receiver modulated metal dependent phosphohydrolase  37.18 
 
 
377 aa  218  8.999999999999998e-56  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_010424  Daud_0677  response regulator receiver modulated metal dependent phosphohydrolase  37.58 
 
 
343 aa  218  8.999999999999998e-56  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.756866  n/a   
 
 
-
 
NC_011769  DvMF_2545  metal dependent phosphohydrolase  49.07 
 
 
269 aa  218  2e-55  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_013946  Mrub_2733  response regulator receiver modulated metal dependent phosphohydrolase  39.53 
 
 
346 aa  217  2e-55  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_4003  response regulator  41.32 
 
 
357 aa  216  2.9999999999999998e-55  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009831  Ssed_3915  response regulator receiver modulated metal dependent phosphohydrolase  40.66 
 
 
356 aa  216  2.9999999999999998e-55  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_3816  response regulator receiver modulated metal dependent phosphohydrolase  35.76 
 
 
351 aa  216  4e-55  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0960158  normal 
 
 
-
 
NC_010172  Mext_3509  metal-dependent phosphohydrolase  35.76 
 
 
351 aa  216  7e-55  Methylobacterium extorquens PA1  Bacteria  normal  0.305053  normal 
 
 
-
 
NC_011757  Mchl_0538  response regulator receiver modulated metal dependent phosphohydrolase  36.23 
 
 
363 aa  215  7e-55  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.973232  normal 
 
 
-
 
NC_008010  Dgeo_2833  metal dependent phosphohydrolase  53.77 
 
 
379 aa  214  9.999999999999999e-55  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.0209293  n/a   
 
 
-
 
NC_010717  PXO_00070  Two-component system response regulator RpfG  36.23 
 
 
353 aa  214  1.9999999999999998e-54  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0844737  n/a   
 
 
-
 
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