More than 300 homologs were found in PanDaTox collection
for query gene DehaBAV1_0937 on replicon NC_009455
Organism: Dehalococcoides sp. BAV1



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009455  DehaBAV1_0937  two component transcriptional regulator  100 
 
 
227 aa  456  1e-127  Dehalococcoides sp. BAV1  Bacteria  normal  0.834094  n/a   
 
 
-
 
NC_013552  DhcVS_926  two-component system, OmpR family, response regulator  90.31 
 
 
227 aa  416  9.999999999999999e-116  Dehalococcoides sp. VS  Bacteria  hitchhiker  0.00200634  n/a   
 
 
-
 
NC_002936  DET1058  DNA-binding response regulator  85.9 
 
 
227 aa  396  1e-109  Dehalococcoides ethenogenes 195  Bacteria  decreased coverage  0.000187393  n/a   
 
 
-
 
NC_013170  Ccur_11690  response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein  53.33 
 
 
236 aa  231  7.000000000000001e-60  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.52451  normal 
 
 
-
 
NC_013165  Shel_00330  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  52.89 
 
 
240 aa  229  3e-59  Slackia heliotrinireducens DSM 20476  Bacteria  decreased coverage  0.00972196  normal 
 
 
-
 
NC_011831  Cagg_2709  two component transcriptional regulator, winged helix family  53.48 
 
 
236 aa  228  4e-59  Chloroflexus aggregans DSM 9485  Bacteria  decreased coverage  0.0011921  normal 
 
 
-
 
NC_013204  Elen_0258  two component transcriptional regulator, winged helix family  51.56 
 
 
236 aa  225  4e-58  Eggerthella lenta DSM 2243  Bacteria  normal  0.606292  normal 
 
 
-
 
NC_010320  Teth514_1155  two component transcriptional regulator  51.32 
 
 
231 aa  224  7e-58  Thermoanaerobacter sp. X514  Bacteria  decreased coverage  0.000000430064  n/a   
 
 
-
 
NC_009972  Haur_3061  two component transcriptional regulator  51.98 
 
 
227 aa  223  2e-57  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.799336  n/a   
 
 
-
 
NC_013203  Apar_1349  two component transcriptional regulator, winged helix family  52.21 
 
 
237 aa  223  2e-57  Atopobium parvulum DSM 20469  Bacteria  normal  normal  0.421984 
 
 
-
 
NC_009523  RoseRS_3485  two component transcriptional regulator  49.55 
 
 
236 aa  223  2e-57  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_0960  two component transcriptional regulator  49.55 
 
 
236 aa  222  3e-57  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.0214647 
 
 
-
 
NC_010320  Teth514_0766  two component transcriptional regulator  50.44 
 
 
231 aa  221  9e-57  Thermoanaerobacter sp. X514  Bacteria  normal  0.585906  n/a   
 
 
-
 
NC_011899  Hore_13280  two component transcriptional regulator, winged helix family  50.88 
 
 
227 aa  219  1.9999999999999999e-56  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.0000000536961  n/a   
 
 
-
 
NC_009972  Haur_2358  two component transcriptional regulator  49.78 
 
 
231 aa  220  1.9999999999999999e-56  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.0136772  n/a   
 
 
-
 
NC_013385  Adeg_1028  two component transcriptional regulator, winged helix family  50.44 
 
 
237 aa  219  1.9999999999999999e-56  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_1847  two component transcriptional regulator  50 
 
 
234 aa  217  1e-55  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.00000121968  n/a   
 
 
-
 
NC_011898  Ccel_1714  two component transcriptional regulator, winged helix family  47.79 
 
 
234 aa  214  8e-55  Clostridium cellulolyticum H10  Bacteria  normal  0.233786  n/a   
 
 
-
 
NC_010001  Cphy_2121  two component transcriptional regulator  50.22 
 
 
231 aa  213  9.999999999999999e-55  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_0070  two component transcriptional regulator  50.89 
 
 
229 aa  214  9.999999999999999e-55  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal  0.834843 
 
 
-
 
NC_008346  Swol_1681  response regulator receiver protein  50.89 
 
 
227 aa  214  9.999999999999999e-55  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.0956507  n/a   
 
 
-
 
NC_008148  Rxyl_2983  two component transcriptional regulator  49.33 
 
 
228 aa  212  4.9999999999999996e-54  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_5905  two component transcriptional regulator, winged helix family  47.79 
 
 
237 aa  211  7e-54  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_011661  Dtur_1237  two component transcriptional regulator, winged helix family  49.11 
 
 
232 aa  211  7e-54  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_012803  Mlut_03750  PhoP-like protein  47.77 
 
 
226 aa  208  4e-53  Micrococcus luteus NCTC 2665  Bacteria  normal  0.181369  n/a   
 
 
-
 
NC_013205  Aaci_2922  two component transcriptional regulator, winged helix family  48.03 
 
 
230 aa  208  5e-53  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.221617  n/a   
 
 
-
 
NC_013947  Snas_5345  two component transcriptional regulator, winged helix family  45.09 
 
 
230 aa  208  5e-53  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.264155 
 
 
-
 
NC_009767  Rcas_1504  two component transcriptional regulator  47.16 
 
 
231 aa  207  1e-52  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.263867  normal  0.57819 
 
 
-
 
NC_011830  Dhaf_1367  two component transcriptional regulator, winged helix family  49.55 
 
 
230 aa  207  1e-52  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.000000177207  n/a   
 
 
-
 
NC_010424  Daud_1897  two component transcriptional regulator  48.88 
 
 
227 aa  206  3e-52  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.151466  n/a   
 
 
-
 
NC_011898  Ccel_1892  two component transcriptional regulator, winged helix family  47.09 
 
 
228 aa  205  4e-52  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.0000392  n/a   
 
 
-
 
NC_014210  Ndas_4670  two component transcriptional regulator, winged helix family  45.33 
 
 
234 aa  204  7e-52  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_0785  two component transcriptional regulator, winged helix family  48.26 
 
 
235 aa  204  9e-52  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009012  Cthe_1288  two component transcriptional regulator  46.19 
 
 
228 aa  204  1e-51  Clostridium thermocellum ATCC 27405  Bacteria  decreased coverage  0.00000000128008  n/a   
 
 
-
 
NC_012034  Athe_1456  two component transcriptional regulator, winged helix family  46.85 
 
 
223 aa  203  2e-51  Anaerocellum thermophilum DSM 6725  Bacteria  decreased coverage  0.000183373  n/a   
 
 
-
 
NC_011831  Cagg_3302  two component transcriptional regulator, winged helix family  47.56 
 
 
231 aa  203  2e-51  Chloroflexus aggregans DSM 9485  Bacteria  normal  hitchhiker  0.000343135 
 
 
-
 
NC_009921  Franean1_6145  two component transcriptional regulator  46.19 
 
 
228 aa  201  6e-51  Frankia sp. EAN1pec  Bacteria  normal  normal  0.788201 
 
 
-
 
NC_007644  Moth_0827  two component transcriptional regulator  48.44 
 
 
256 aa  201  9e-51  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.00211389  normal  0.244563 
 
 
-
 
NC_008146  Mmcs_0661  two component transcriptional regulator  43.56 
 
 
228 aa  200  9.999999999999999e-51  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_3737  two component transcriptional regulator  46.05 
 
 
231 aa  201  9.999999999999999e-51  Roseiflexus sp. RS-1  Bacteria  normal  hitchhiker  0.00273603 
 
 
-
 
NC_008705  Mkms_0674  two component transcriptional regulator  43.56 
 
 
228 aa  200  9.999999999999999e-51  Mycobacterium sp. KMS  Bacteria  normal  normal  0.850641 
 
 
-
 
NC_010718  Nther_0916  two component transcriptional regulator, winged helix family  45.5 
 
 
234 aa  200  9.999999999999999e-51  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.0276045  hitchhiker  9.727110000000001e-18 
 
 
-
 
NC_009077  Mjls_0654  two component transcriptional regulator  43.56 
 
 
228 aa  200  9.999999999999999e-51  Mycobacterium sp. JLS  Bacteria  normal  normal  0.682961 
 
 
-
 
NC_013510  Tcur_0700  two component transcriptional regulator, winged helix family  46.67 
 
 
226 aa  200  1.9999999999999998e-50  Thermomonospora curvata DSM 43183  Bacteria  normal  0.768939  n/a   
 
 
-
 
NC_002936  DET0135  DNA-binding response regulator  47.39 
 
 
230 aa  199  3e-50  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_013124  Afer_0200  two component transcriptional regulator, winged helix family  47.77 
 
 
242 aa  199  3e-50  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.0955644  n/a   
 
 
-
 
NC_012793  GWCH70_3409  two component transcriptional regulator, winged helix family  46.32 
 
 
236 aa  199  3e-50  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_1077  two component transcriptional regulator, winged helix family  48.29 
 
 
235 aa  199  3e-50  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_2782  two component transcriptional regulator  45.18 
 
 
231 aa  199  3.9999999999999996e-50  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.92379  normal 
 
 
-
 
NC_013411  GYMC61_3538  two component transcriptional regulator, winged helix family  47.41 
 
 
237 aa  199  3.9999999999999996e-50  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010320  Teth514_0588  two component transcriptional regulator  49.55 
 
 
227 aa  198  3.9999999999999996e-50  Thermoanaerobacter sp. X514  Bacteria  unclonable  0.000000000451147  n/a   
 
 
-
 
NC_013131  Caci_8215  two component transcriptional regulator, winged helix family  45.29 
 
 
226 aa  198  6e-50  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_5259  two component transcriptional regulator  46.52 
 
 
235 aa  198  7e-50  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.000559572  n/a   
 
 
-
 
NC_008532  STER_1116  DNA-binding response regulator  46.98 
 
 
235 aa  198  7e-50  Streptococcus thermophilus LMD-9  Bacteria  normal  0.310768  n/a   
 
 
-
 
NC_013757  Gobs_4602  two component transcriptional regulator, winged helix family  44.39 
 
 
226 aa  197  7.999999999999999e-50  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B5346  DNA-binding response regulator YycF  46.96 
 
 
235 aa  197  7.999999999999999e-50  Bacillus cereus G9842  Bacteria  hitchhiker  0.000000234523  hitchhiker  0.00000000000323141 
 
 
-
 
NC_013216  Dtox_2915  two component transcriptional regulator, winged helix family  47.56 
 
 
225 aa  197  9e-50  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.892207  normal  0.300351 
 
 
-
 
NC_013595  Sros_8764  response regulator receiver protein  46.7 
 
 
229 aa  197  1.0000000000000001e-49  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_3739  two component transcriptional regulator, winged helix family  46.85 
 
 
230 aa  197  1.0000000000000001e-49  Desulfitobacterium hafniense DCB-2  Bacteria  decreased coverage  0.0000000000466515  n/a   
 
 
-
 
NC_013946  Mrub_0031  two component transcriptional regulator, winged helix family  46.12 
 
 
234 aa  197  1.0000000000000001e-49  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_0499  winged helix family two component transcriptional regulator  46.22 
 
 
229 aa  197  1.0000000000000001e-49  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_009674  Bcer98_2250  two component transcriptional regulator  47.81 
 
 
225 aa  197  1.0000000000000001e-49  Bacillus cytotoxicus NVH 391-98  Bacteria  decreased coverage  0.00000295266  n/a   
 
 
-
 
NC_009674  Bcer98_4006  two component transcriptional regulator  46.52 
 
 
235 aa  197  1.0000000000000001e-49  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.010356  n/a   
 
 
-
 
NC_003909  BCE_3620  DNA-binding response regulator  47.37 
 
 
225 aa  196  2.0000000000000003e-49  Bacillus cereus ATCC 10987  Bacteria  normal  0.0597824  n/a   
 
 
-
 
NC_004116  SAG0719  DNA-binding response regulator  46.98 
 
 
236 aa  196  2.0000000000000003e-49  Streptococcus agalactiae 2603V/R  Bacteria  normal  0.0951718  n/a   
 
 
-
 
NC_005945  BAS3396  DNA-binding response regulator  47.37 
 
 
225 aa  196  2.0000000000000003e-49  Bacillus anthracis str. Sterne  Bacteria  decreased coverage  0.0000765328  n/a   
 
 
-
 
NC_005957  BT9727_3358  transcriptional regulatory protein  47.37 
 
 
225 aa  196  2.0000000000000003e-49  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.0000200566  n/a   
 
 
-
 
NC_011658  BCAH187_A3627  DNA-binding response regulator  47.37 
 
 
225 aa  196  2.0000000000000003e-49  Bacillus cereus AH187  Bacteria  hitchhiker  0.0000000456124  n/a   
 
 
-
 
NC_006274  BCZK3308  transcriptional regulatory protein  47.37 
 
 
225 aa  196  2.0000000000000003e-49  Bacillus cereus E33L  Bacteria  hitchhiker  0.000872353  n/a   
 
 
-
 
NC_007530  GBAA_3661  DNA-binding response regulator  47.37 
 
 
225 aa  196  2.0000000000000003e-49  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  hitchhiker  0.000000222084  n/a   
 
 
-
 
NC_011773  BCAH820_3612  DNA-binding response regulator  47.37 
 
 
225 aa  196  2.0000000000000003e-49  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  4.20142e-22 
 
 
-
 
NC_011725  BCB4264_A5589  DNA-binding response regulator YycF  46.52 
 
 
235 aa  196  2.0000000000000003e-49  Bacillus cereus B4264  Bacteria  normal  0.0469644  n/a   
 
 
-
 
NC_011725  BCB4264_A3709  DNA-binding response regulator  47.37 
 
 
225 aa  197  2.0000000000000003e-49  Bacillus cereus B4264  Bacteria  unclonable  0.0000227696  n/a   
 
 
-
 
NC_011772  BCG9842_B1606  DNA-binding response regulator  47.37 
 
 
225 aa  197  2.0000000000000003e-49  Bacillus cereus G9842  Bacteria  hitchhiker  0.00543423  hitchhiker  0.0000000112462 
 
 
-
 
NC_013169  Ksed_03700  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  44.84 
 
 
226 aa  196  3e-49  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal  0.132847 
 
 
-
 
NC_011773  BCAH820_2574  DNA-binding response regulator  45.22 
 
 
231 aa  196  3e-49  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.00000000000040017 
 
 
-
 
NC_005945  BAS2385  DNA-binding response regulator  45.22 
 
 
231 aa  196  3e-49  Bacillus anthracis str. Sterne  Bacteria  normal  0.534853  n/a   
 
 
-
 
NC_005957  BT9727_2341  DNA-binding response regulator  45.22 
 
 
231 aa  196  3e-49  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.000000166477  n/a   
 
 
-
 
NC_007530  GBAA_2561  DNA-binding response regulator  45.22 
 
 
231 aa  196  3e-49  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.630654  n/a   
 
 
-
 
NC_013159  Svir_02690  response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein  45.13 
 
 
229 aa  196  3e-49  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_3288  two component transcriptional regulator  47.37 
 
 
225 aa  196  3e-49  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0366247  n/a   
 
 
-
 
NC_009767  Rcas_0353  two component transcriptional regulator  45.61 
 
 
230 aa  196  3e-49  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.683455 
 
 
-
 
NC_012803  Mlut_14770  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  47.27 
 
 
226 aa  196  3e-49  Micrococcus luteus NCTC 2665  Bacteria  normal  0.383411  n/a   
 
 
-
 
NC_003909  BCE_5615  DNA-binding response regulator YycF  46.52 
 
 
235 aa  195  4.0000000000000005e-49  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS5319  DNA-binding response regulator YycF  46.52 
 
 
235 aa  195  4.0000000000000005e-49  Bacillus anthracis str. Sterne  Bacteria  normal  0.169223  n/a   
 
 
-
 
NC_011658  BCAH187_A2617  DNA-binding response regulator  45.22 
 
 
231 aa  195  4.0000000000000005e-49  Bacillus cereus AH187  Bacteria  normal  0.993672  n/a   
 
 
-
 
NC_011773  BCAH820_5572  DNA-binding response regulator YycF  46.52 
 
 
235 aa  195  4.0000000000000005e-49  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.81316e-29 
 
 
-
 
NC_005957  BT9727_5147  response regulator  46.52 
 
 
235 aa  195  4.0000000000000005e-49  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00168683  n/a   
 
 
-
 
NC_006274  BCZK5163  response regulator  46.52 
 
 
235 aa  195  4.0000000000000005e-49  Bacillus cereus E33L  Bacteria  hitchhiker  0.00196509  n/a   
 
 
-
 
NC_007530  GBAA_5715  DNA-binding response regulator YycF  46.52 
 
 
235 aa  195  4.0000000000000005e-49  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.656882  n/a   
 
 
-
 
NC_011658  BCAH187_A5650  DNA-binding response regulator YycF  46.52 
 
 
235 aa  195  4.0000000000000005e-49  Bacillus cereus AH187  Bacteria  hitchhiker  0.00563499  n/a   
 
 
-
 
NC_011898  Ccel_3394  two component transcriptional regulator, winged helix family  46.67 
 
 
230 aa  195  4.0000000000000005e-49  Clostridium cellulolyticum H10  Bacteria  normal  0.103692  n/a   
 
 
-
 
NC_008607  Ppro_3691  two component transcriptional regulator  43.56 
 
 
230 aa  195  5.000000000000001e-49  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_2333  two component transcriptional regulator  45.13 
 
 
232 aa  195  6e-49  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_10499  two component system sensor transduction protein regX3  43.75 
 
 
227 aa  194  7e-49  Mycobacterium tuberculosis F11  Bacteria  decreased coverage  2.46064e-66  normal 
 
 
-
 
NC_013205  Aaci_1104  two component transcriptional regulator, winged helix family  47.19 
 
 
233 aa  194  7e-49  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_1488  two component transcriptional regulator  44.25 
 
 
228 aa  194  7e-49  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.00208742  n/a   
 
 
-
 
NC_008726  Mvan_0831  two component transcriptional regulator  42.67 
 
 
228 aa  194  7e-49  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.310785  normal 
 
 
-
 
NC_011772  BCG9842_B2796  DNA-binding response regulator  45.22 
 
 
231 aa  194  8.000000000000001e-49  Bacillus cereus G9842  Bacteria  normal  0.512352  hitchhiker  0.00000533196 
 
 
-
 
NC_012034  Athe_0080  two component transcriptional regulator, winged helix family  45.21 
 
 
230 aa  194  8.000000000000001e-49  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>