More than 300 homologs were found in PanDaTox collection
for query gene Dd703_3231 on replicon NC_012880
Organism: Dickeya dadantii Ech703



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012880  Dd703_3231  extracellular solute-binding protein family 1  100 
 
 
325 aa  662    Dickeya dadantii Ech703  Bacteria  normal  0.416701  n/a   
 
 
-
 
NC_009654  Mmwyl1_0120  extracellular solute-binding protein  62.58 
 
 
340 aa  385  1e-106  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_008044  TM1040_0544  extracellular solute-binding protein  59.62 
 
 
322 aa  381  1e-104  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_2736  extracellular solute-binding protein family 1  55.95 
 
 
325 aa  340  2e-92  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.288744  normal 
 
 
-
 
NC_011369  Rleg2_2481  extracellular solute-binding protein family 1  55.52 
 
 
330 aa  334  1e-90  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.37214  normal  0.635435 
 
 
-
 
NC_009636  Smed_1948  extracellular solute-binding protein  54.72 
 
 
326 aa  333  3e-90  Sinorhizobium medicae WSM419  Bacteria  normal  0.113804  normal  0.383853 
 
 
-
 
NC_009667  Oant_1463  extracellular solute-binding protein  48.77 
 
 
326 aa  292  5e-78  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.512158  n/a   
 
 
-
 
NC_008686  Pden_1078  extracellular solute-binding protein  45.14 
 
 
322 aa  281  9e-75  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A3199  extracellular solute-binding protein  44.44 
 
 
338 aa  272  7e-72  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.680045  n/a   
 
 
-
 
NC_011769  DvMF_1586  extracellular solute-binding protein family 1  31.17 
 
 
333 aa  154  2.9999999999999998e-36  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_013946  Mrub_1201  extracellular solute-binding protein family 1  30.69 
 
 
320 aa  139  7e-32  Meiothermus ruber DSM 1279  Bacteria  normal  0.941139  normal  0.523727 
 
 
-
 
NC_009668  Oant_2833  extracellular solute-binding protein  32.3 
 
 
320 aa  132  9e-30  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.235826  n/a   
 
 
-
 
NC_008698  Tpen_1554  extracellular solute-binding protein  29.78 
 
 
354 aa  132  1.0000000000000001e-29  Thermofilum pendens Hrk 5  Archaea  normal  0.202841  n/a   
 
 
-
 
NC_011725  BCB4264_A1374  putative iron compound ABC transporter, iron compound-binding protein  31.01 
 
 
358 aa  130  3e-29  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_1436  iron compound ABC transporter, iron compound-binding protein, putative  30.91 
 
 
346 aa  129  9.000000000000001e-29  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS1235  iron compound ABC transporter iron compound-binding protein  30.91 
 
 
358 aa  129  9.000000000000001e-29  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_1212  iron ABC transporter solute-binding protein  30.91 
 
 
358 aa  129  9.000000000000001e-29  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK1214  iron ABC transporter solute-binding protein  30.91 
 
 
358 aa  129  9.000000000000001e-29  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_1337  iron compound ABC transporter iron compound-binding protein  30.91 
 
 
358 aa  129  9.000000000000001e-29  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B3970  putative iron compound ABC transporter, iron compound-binding protein  30.91 
 
 
358 aa  129  9.000000000000001e-29  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_011773  BCAH820_1411  putative iron compound ABC transporter, iron compound-binding protein  30.91 
 
 
358 aa  129  9.000000000000001e-29  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_010184  BcerKBAB4_1237  extracellular metal-binding protein  30.91 
 
 
358 aa  128  1.0000000000000001e-28  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A1476  putative iron compound ABC transporter, iron compound-binding protein  30.91 
 
 
358 aa  129  1.0000000000000001e-28  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A1753  putative ABC transporter, substrate-binding protein  29.8 
 
 
341 aa  127  2.0000000000000002e-28  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1611  extracellular solute-binding protein  29.47 
 
 
341 aa  125  1e-27  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.257155  n/a   
 
 
-
 
NC_003909  BCE_1812  ABC transporter, substrate-binding protein, putative  29.14 
 
 
341 aa  124  2e-27  Bacillus cereus ATCC 10987  Bacteria  normal  0.98446  n/a   
 
 
-
 
NC_006274  BCZK1563  ABC transporter, substrate-binding protein  29.14 
 
 
341 aa  124  2e-27  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A1866  putative ABC transporter, substrate-binding protein  29.14 
 
 
341 aa  124  2e-27  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B3590  putative ABC transporter, substrate-binding protein  29.14 
 
 
341 aa  124  2e-27  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_009674  Bcer98_1048  extracellular solute-binding protein  29.75 
 
 
356 aa  122  7e-27  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_5135  ABC transporter, periplasmic binding protein  31.6 
 
 
341 aa  122  9e-27  Pseudomonas putida KT2440  Bacteria  normal  0.659918  normal 
 
 
-
 
NC_009620  Smed_4877  extracellular solute-binding protein  29.66 
 
 
340 aa  119  9.999999999999999e-26  Sinorhizobium medicae WSM419  Bacteria  normal  0.713524  normal  0.38801 
 
 
-
 
NC_005945  BAS1611  ABC transporter substrate-binding protein  29.14 
 
 
341 aa  117  1.9999999999999998e-25  Bacillus anthracis str. Sterne  Bacteria  normal  0.791321  n/a   
 
 
-
 
NC_007530  GBAA_1735  ABC transporter substrate-binding protein  29.14 
 
 
341 aa  117  1.9999999999999998e-25  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.313912  n/a   
 
 
-
 
NC_010002  Daci_1282  2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component  30.34 
 
 
347 aa  117  1.9999999999999998e-25  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_005957  BT9727_1572  ABC transporter, substrate-binding protein  29.14 
 
 
341 aa  117  3e-25  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_1221  extracellular solute-binding protein family 1  32.49 
 
 
326 aa  115  7.999999999999999e-25  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.141693  n/a   
 
 
-
 
NC_007492  Pfl01_5367  extracellular solute-binding protein  30.88 
 
 
341 aa  115  8.999999999999998e-25  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_010084  Bmul_3135  2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component  29.63 
 
 
351 aa  114  2.0000000000000002e-24  Burkholderia multivorans ATCC 17616  Bacteria  normal  hitchhiker  0.0000124491 
 
 
-
 
NC_007348  Reut_B5874  extracellular solute-binding protein  27.24 
 
 
341 aa  114  2.0000000000000002e-24  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_1786  putative ABC transporter, substrate-binding protein  28.81 
 
 
341 aa  114  2.0000000000000002e-24  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_007510  Bcep18194_A6494  ABC Fe3+ siderophore transporter, periplasmic ligand binding protein  29.78 
 
 
351 aa  114  3e-24  Burkholderia sp. 383  Bacteria  decreased coverage  0.000128013  normal  0.750448 
 
 
-
 
NC_010501  PputW619_0330  2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component  31.12 
 
 
341 aa  113  3e-24  Pseudomonas putida W619  Bacteria  normal  normal  0.631264 
 
 
-
 
NC_010678  Rpic_4473  2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component  29.01 
 
 
341 aa  113  4.0000000000000004e-24  Ralstonia pickettii 12J  Bacteria  normal  normal  0.144148 
 
 
-
 
NC_012857  Rpic12D_4607  2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component  29.01 
 
 
341 aa  113  4.0000000000000004e-24  Ralstonia pickettii 12D  Bacteria  normal  0.980284  normal 
 
 
-
 
NC_010322  PputGB1_5188  2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component  31.12 
 
 
341 aa  113  5e-24  Pseudomonas putida GB-1  Bacteria  normal  0.491174  normal 
 
 
-
 
NC_009512  Pput_5008  extracellular solute-binding protein  31.12 
 
 
341 aa  112  6e-24  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_010508  Bcenmc03_3159  2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component  29.93 
 
 
351 aa  110  3e-23  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.451295  normal  0.0280644 
 
 
-
 
NC_009436  Ent638_2070  extracellular solute-binding protein  31.16 
 
 
322 aa  110  3e-23  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_013205  Aaci_0041  extracellular solute-binding protein family 1  31.34 
 
 
336 aa  110  4.0000000000000004e-23  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_2899  extracellular solute-binding protein  29.79 
 
 
345 aa  108  1e-22  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  decreased coverage  0.00994055 
 
 
-
 
NC_007348  Reut_B5525  extracellular solute-binding protein  28.77 
 
 
340 aa  107  3e-22  Ralstonia eutropha JMP134  Bacteria  normal  0.655164  n/a   
 
 
-
 
NC_008688  Pden_4658  extracellular solute-binding protein  28.75 
 
 
440 aa  105  8e-22  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_4694  extracellular solute-binding protein  28.17 
 
 
349 aa  104  2e-21  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_0970  extracellular solute-binding protein  26.67 
 
 
340 aa  104  2e-21  Verminephrobacter eiseniae EF01-2  Bacteria  decreased coverage  0.00000273849  normal 
 
 
-
 
NC_011894  Mnod_5871  extracellular solute-binding protein family 1  28.34 
 
 
342 aa  103  5e-21  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0432658  n/a   
 
 
-
 
NC_009635  Maeo_0333  extracellular solute-binding protein  27.51 
 
 
344 aa  102  1e-20  Methanococcus aeolicus Nankai-3  Archaea  normal  0.853179  n/a   
 
 
-
 
NC_008346  Swol_2476  ABC-type iron(III)-binding periplasmic protein precursor  27.06 
 
 
364 aa  97.4  3e-19  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  decreased coverage  0.00000339151  n/a   
 
 
-
 
NC_008346  Swol_2479  ABC transporter, periplasmic substrate-binding protein  25.48 
 
 
347 aa  97.1  4e-19  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_009456  VC0395_0545  ABC transporter, periplasmic substrate-binding protein  28.22 
 
 
339 aa  95.9  7e-19  Vibrio cholerae O395  Bacteria  hitchhiker  0.001131  n/a   
 
 
-
 
NC_011313  VSAL_II0811  extracellular solute-binding protein  27.56 
 
 
351 aa  94.4  2e-18  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_04877  ABC-type Fe3+ transport system periplasmic component  27.37 
 
 
336 aa  94.4  3e-18  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013457  VEA_000766  ABC transporter, periplasmic substrate-binding protein  27.02 
 
 
336 aa  93.6  4e-18  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_2294  extracellular solute-binding protein  28.9 
 
 
381 aa  92.8  7e-18  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009637  MmarC7_1107  extracellular solute-binding protein  26.42 
 
 
343 aa  92.8  8e-18  Methanococcus maripaludis C7  Archaea  normal  0.695758  normal 
 
 
-
 
NC_008752  Aave_3891  extracellular solute-binding protein  27.33 
 
 
327 aa  92.4  8e-18  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_4801  extracellular solute-binding protein  27.44 
 
 
442 aa  92.4  9e-18  Delftia acidovorans SPH-1  Bacteria  normal  0.433474  normal 
 
 
-
 
NC_009135  MmarC5_1570  extracellular solute-binding protein  26.22 
 
 
350 aa  91.7  1e-17  Methanococcus maripaludis C5  Archaea  normal  0.840173  n/a   
 
 
-
 
NC_012917  PC1_1545  extracellular solute-binding protein family 1  28.98 
 
 
339 aa  91.7  2e-17  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.061269  n/a   
 
 
-
 
NC_009456  VC0395_0625  iron(III) ABC transporter, periplasmic iron-compound-binding protein  27.22 
 
 
344 aa  90.1  4e-17  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_21350  ABC-type Fe3+ transport system, substrate binding component  23.66 
 
 
349 aa  90.1  5e-17  Azotobacter vinelandii DJ  Bacteria  normal  0.180664  n/a   
 
 
-
 
NC_013421  Pecwa_2917  extracellular solute-binding protein family 1  28.62 
 
 
339 aa  89.7  7e-17  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_52130  periplasmic binding protein  29.63 
 
 
388 aa  88.6  1e-16  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_1588  extracellular solute-binding protein  26.9 
 
 
368 aa  88.2  2e-16  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_0435  extracellular solute-binding protein, family 1  29.6 
 
 
343 aa  88.2  2e-16  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_0833  extracellular solute-binding protein  30.58 
 
 
343 aa  87.4  3e-16  Enterobacter sp. 638  Bacteria  normal  normal  0.752683 
 
 
-
 
NC_009767  Rcas_3171  extracellular solute-binding protein  28.76 
 
 
382 aa  87.4  3e-16  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_008709  Ping_2746  ABC transporter periplasmic substrate-binding protein  27.72 
 
 
335 aa  87  4e-16  Psychromonas ingrahamii 37  Bacteria  normal  0.553799  normal 
 
 
-
 
NC_012852  Rleg_6061  extracellular solute-binding protein family 1  26.25 
 
 
342 aa  86.3  7e-16  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B1044  ABC transporter, periplasmic ligand binding protein  28.79 
 
 
362 aa  84.3  0.000000000000003  Burkholderia xenovorans LB400  Bacteria  normal  0.331703  normal 
 
 
-
 
NC_010676  Bphyt_5676  extracellular solute-binding protein family 1  28.46 
 
 
362 aa  84.3  0.000000000000003  Burkholderia phytofirmans PsJN  Bacteria  normal  0.529859  normal  0.553498 
 
 
-
 
NC_014150  Bmur_0924  extracellular solute-binding protein family 1  26.25 
 
 
334 aa  80.9  0.00000000000002  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_0113  ABC transporter, periplasmic substrate-binding protein  27.82 
 
 
362 aa  80.9  0.00000000000003  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A1502  ABC transporter, periplasmic substrate-binding protein  27.82 
 
 
362 aa  80.9  0.00000000000003  Burkholderia mallei NCTC 10247  Bacteria  normal  0.640725  n/a   
 
 
-
 
NC_008060  Bcen_0753  extracellular solute-binding protein  29.81 
 
 
365 aa  80.5  0.00000000000004  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_1234  extracellular solute-binding protein  29.81 
 
 
365 aa  80.5  0.00000000000004  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_1208  extracellular solute-binding protein  29.81 
 
 
342 aa  79.7  0.00000000000006  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.527758  normal 
 
 
-
 
NC_008061  Bcen_4122  extracellular solute-binding protein  26.87 
 
 
366 aa  79.7  0.00000000000006  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.0845667  n/a   
 
 
-
 
NC_008543  Bcen2424_4244  extracellular solute-binding protein  26.87 
 
 
366 aa  79.7  0.00000000000006  Burkholderia cenocepacia HI2424  Bacteria  normal  0.611623  normal  0.0395193 
 
 
-
 
NC_008554  Sfum_3495  extracellular solute-binding protein  29.48 
 
 
375 aa  79.7  0.00000000000006  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.0500866  normal  0.246878 
 
 
-
 
NC_010084  Bmul_2074  extracellular solute-binding protein  30.97 
 
 
342 aa  79.7  0.00000000000007  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_1306  extracellular solute-binding protein  27.13 
 
 
369 aa  79.3  0.00000000000009  Geobacter uraniireducens Rf4  Bacteria  normal  0.701273  n/a   
 
 
-
 
NC_013171  Apre_0051  extracellular solute-binding protein family 1  27.34 
 
 
378 aa  79  0.00000000000009  Anaerococcus prevotii DSM 20548  Bacteria  normal  0.115612  n/a   
 
 
-
 
NC_007510  Bcep18194_A4343  ABC transporter, periplasmic ligand binding protein  30.97 
 
 
370 aa  79  0.00000000000009  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_010581  Bind_2968  extracellular solute-binding protein  26.86 
 
 
445 aa  79  0.0000000000001  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.812096 
 
 
-
 
NC_007511  Bcep18194_B1767  ABC Fe3+ siderophore transporter, periplasmic ligand binding protein  26.87 
 
 
366 aa  79  0.0000000000001  Burkholderia sp. 383  Bacteria  normal  0.583626  normal  0.0378604 
 
 
-
 
NC_010515  Bcenmc03_3273  extracellular solute-binding protein  26.87 
 
 
366 aa  78.6  0.0000000000001  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.281784  normal  0.946498 
 
 
-
 
NC_007951  Bxe_A1468  ABC polyamine transporter, periplasmic ligand binding protein  29.67 
 
 
349 aa  79  0.0000000000001  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.119305 
 
 
-
 
NC_007947  Mfla_1990  putative regulatory lipoprotein  28.17 
 
 
419 aa  78.2  0.0000000000002  Methylobacillus flagellatus KT  Bacteria  normal  0.307134  normal 
 
 
-
 
NC_008836  BMA10229_A0652  ABC transporter, periplasmic substrate-binding protein  29.58 
 
 
353 aa  77.8  0.0000000000002  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
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