51 homologs were found in PanDaTox collection
for query gene Dd1591_3669 on replicon NC_012912
Organism: Dickeya zeae Ech1591



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012912  Dd1591_3669  putative 5-methylcytosine restriction system component  100 
 
 
436 aa  896    Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_3330  hypothetical protein  59.72 
 
 
428 aa  492  9.999999999999999e-139  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A4531  hypothetical protein  62.88 
 
 
267 aa  323  4e-87  Escherichia coli HS  Bacteria  normal  0.814257  n/a   
 
 
-
 
NC_010465  YPK_3671  hypothetical protein  59.48 
 
 
273 aa  318  1e-85  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A1240  hypothetical protein  40.78 
 
 
438 aa  313  2.9999999999999996e-84  Yersinia pestis Angola  Bacteria  normal  0.0689849  hitchhiker  0.000177876 
 
 
-
 
NC_007492  Pfl01_2661  hypothetical protein  42.48 
 
 
429 aa  311  1e-83  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.706395 
 
 
-
 
NC_007005  Psyr_3724  hypothetical protein  36.52 
 
 
418 aa  249  6e-65  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_1654  hypothetical protein  36.36 
 
 
424 aa  248  2e-64  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.159244  n/a   
 
 
-
 
NC_009665  Shew185_1981  hypothetical protein  36.75 
 
 
428 aa  239  1e-61  Shewanella baltica OS185  Bacteria  normal  0.51853  n/a   
 
 
-
 
NC_009512  Pput_4619  McrBC 5-methylcytosine restriction system component-like protein  35.76 
 
 
436 aa  231  1e-59  Pseudomonas putida F1  Bacteria  decreased coverage  0.000187053  hitchhiker  0.0000000628519 
 
 
-
 
NC_009671  Oant_4726  hypothetical protein  34.68 
 
 
422 aa  221  3e-56  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.445039  n/a   
 
 
-
 
NC_007509  Bcep18194_C7439  McrBC 5-methylcytosine restriction system component-like  32.94 
 
 
445 aa  216  5e-55  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_1862  hypothetical protein  35.51 
 
 
431 aa  211  2e-53  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_2471  5-methylcytosine restriction system component- like protein  34.13 
 
 
428 aa  208  2e-52  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.248512 
 
 
-
 
NC_009637  MmarC7_0003  hypothetical protein  29.44 
 
 
416 aa  204  2e-51  Methanococcus maripaludis C7  Archaea  hitchhiker  0.00559809  unclonable  0.0000000111615 
 
 
-
 
NC_009438  Sputcn32_2911  hypothetical protein  32.33 
 
 
435 aa  197  4.0000000000000005e-49  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_003912  CJE0135  hypothetical protein  25.65 
 
 
443 aa  161  3e-38  Campylobacter jejuni RM1221  Bacteria  normal  0.0584774  n/a   
 
 
-
 
NC_009707  JJD26997_0154  hypothetical protein  26.81 
 
 
445 aa  155  2e-36  Campylobacter jejuni subsp. doylei 269.97  Bacteria  normal  0.899736  n/a   
 
 
-
 
NC_008787  CJJ81176_0176  hypothetical protein  30.53 
 
 
288 aa  138  2e-31  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_1591  hypothetical protein  30.66 
 
 
429 aa  128  2.0000000000000002e-28  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_3309  IQ calmodulin-binding- domain protein  31.3 
 
 
426 aa  120  7e-26  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_3470  McrBC 5-methylcytosine restriction system component-like protein  25.93 
 
 
423 aa  111  2.0000000000000002e-23  Chitinophaga pinensis DSM 2588  Bacteria  decreased coverage  0.00801853  normal  0.511219 
 
 
-
 
NC_008261  CPF_0993  hypothetical protein  25.08 
 
 
437 aa  108  2e-22  Clostridium perfringens ATCC 13124  Bacteria  normal  0.235646  n/a   
 
 
-
 
NC_013926  Aboo_1011  5-methylcytosine restriction system component-like protein  25.14 
 
 
460 aa  102  1e-20  Aciduliprofundum boonei T469  Archaea  hitchhiker  0.00000144218  n/a   
 
 
-
 
NC_007796  Mhun_1299  McrBC 5-methylcytosine restriction system component-like  23.02 
 
 
437 aa  88.2  3e-16  Methanospirillum hungatei JF-1  Archaea  hitchhiker  0.000217939  normal  0.126015 
 
 
-
 
NC_013595  Sros_2402  McrBC 5-methylcytosine restriction system component-like protein  26.99 
 
 
431 aa  85.5  0.000000000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.073965 
 
 
-
 
NC_013158  Huta_1703  McrBC 5-methylcytosine restriction system component-like protein  25.43 
 
 
421 aa  83.6  0.000000000000007  Halorhabdus utahensis DSM 12940  Archaea  normal  n/a   
 
 
-
 
NC_007204  Psyc_0227  hypothetical protein  24.62 
 
 
514 aa  75.5  0.000000000002  Psychrobacter arcticus 273-4  Bacteria  normal  0.0395217  normal 
 
 
-
 
NC_012793  GWCH70_1386  McrBC 5-methylcytosine restriction system component-like protein  21.24 
 
 
411 aa  68.6  0.0000000002  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_007355  Mbar_A3270  hypothetical protein  22.69 
 
 
453 aa  67.8  0.0000000003  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.0179938  normal  0.335413 
 
 
-
 
NC_009338  Mflv_3197  McrBC 5-methylcytosine restriction system component-like protein  24.33 
 
 
446 aa  67.4  0.0000000005  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.0398257  normal 
 
 
-
 
NC_007969  Pcryo_0253  hypothetical protein  24.89 
 
 
498 aa  67  0.0000000006  Psychrobacter cryohalolentis K5  Bacteria  normal  0.13037  normal  0.68079 
 
 
-
 
NC_010718  Nther_0806  McrBC 5-methylcytosine restriction system component-like protein  23.46 
 
 
383 aa  65.5  0.000000002  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.0894928  hitchhiker  0.000053751 
 
 
-
 
NC_009253  Dred_0026  McrBC 5-methylcytosine restriction system component-like protein  28.44 
 
 
334 aa  61.2  0.00000003  Desulfotomaculum reducens MI-1  Bacteria  normal  0.579056  n/a   
 
 
-
 
NC_013131  Caci_6960  hypothetical protein  23.78 
 
 
405 aa  61.2  0.00000003  Catenulispora acidiphila DSM 44928  Bacteria  hitchhiker  0.00920086  normal 
 
 
-
 
NC_013595  Sros_7821  McrBC 5-methylcytosine restriction system component-like protein  28.52 
 
 
406 aa  58.9  0.0000002  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_05460  McrBC 5-methylcytosine restriction system component  25.46 
 
 
393 aa  57  0.0000007  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_3300  5-methylcytosine restriction system component- like protein  23.66 
 
 
398 aa  54.3  0.000004  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_0863  McrBC 5-methylcytosine restriction system component-like protein  23.99 
 
 
418 aa  52.8  0.00001  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013203  Apar_1213  5-methylcytosine-specific restriction enzyme subunit McrC  21.45 
 
 
351 aa  52.4  0.00002  Atopobium parvulum DSM 20469  Bacteria  normal  normal  0.816052 
 
 
-
 
NC_011886  Achl_0976  hypothetical protein  26.57 
 
 
430 aa  50.4  0.00006  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.0362174 
 
 
-
 
NC_008312  Tery_3582  McrBC 5-methylcytosine restriction system component-like  20.45 
 
 
405 aa  50.1  0.00007  Trichodesmium erythraeum IMS101  Bacteria  normal  normal 
 
 
-
 
NC_002950  PG0972  hypothetical protein  28.72 
 
 
431 aa  49.7  0.0001  Porphyromonas gingivalis W83  Bacteria  n/a    normal  0.241373 
 
 
-
 
NC_012892  B21_04175  hypothetical protein  25.87 
 
 
348 aa  48.9  0.0002  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
CP001509  ECD_04211  5-methylcytosine-specific restriction enzyme McrBC, subunit McrC  25.87 
 
 
348 aa  48.9  0.0002  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
NC_007960  Nham_4503  5-methylcytosine-specific restriction enzyme subunit McrC  22.56 
 
 
361 aa  48.1  0.0003  Nitrobacter hamburgensis X14  Bacteria  normal  0.544571  n/a   
 
 
-
 
CP001637  EcDH1_3652  5-methylcytosine-specific restriction enzyme subunit McrC  26.67 
 
 
348 aa  48.5  0.0003  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_007794  Saro_0350  McrBC 5-methylcytosine restriction system component-like  29.69 
 
 
687 aa  47.4  0.0005  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_013162  Coch_1910  McrBC 5-methylcytosine restriction system component-like protein  23.22 
 
 
437 aa  46.6  0.0008  Capnocytophaga ochracea DSM 7271  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_2839  McrBC 5-methylcytosine restriction system component-like  25.09 
 
 
416 aa  45.1  0.003  Frankia sp. CcI3  Bacteria  normal  normal  0.117814 
 
 
-
 
NC_010625  Bphy_6932  5-methylcytosine-specific restriction enzyme subunit McrC  24.44 
 
 
363 aa  44.3  0.005  Burkholderia phymatum STM815  Bacteria  normal  0.688838  normal 
 
 
-
 
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