More than 300 homologs were found in PanDaTox collection
for query gene Dbac_2998 on replicon NC_013173
Organism: Desulfomicrobium baculatum DSM 4028



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013173  Dbac_2998  response regulator receiver protein  100 
 
 
377 aa  768    Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_0140  response regulator receiver protein  44.26 
 
 
371 aa  301  2e-80  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_2946  response regulator receiver modulated serine phosphatase  37.2 
 
 
384 aa  194  2e-48  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_006274  BCZK0898  sigma factor sigB regulation protein  29.46 
 
 
380 aa  158  1e-37  Bacillus cereus E33L  Bacteria  normal  0.503671  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0905  response regulator receiver modulated serine phosphatase  29.46 
 
 
380 aa  158  2e-37  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0915  sigma factor sigB regulation protein  29.46 
 
 
380 aa  158  2e-37  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00116334  n/a   
 
 
-
 
NC_011773  BCAH820_1070  response regulator  29.46 
 
 
358 aa  158  2e-37  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  9.209800000000002e-41 
 
 
-
 
NC_011658  BCAH187_A1161  response regulator  29.46 
 
 
380 aa  157  3e-37  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_0205  response regulator receiver protein  33.33 
 
 
395 aa  156  6e-37  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS0930  response regulator  29.46 
 
 
380 aa  155  8e-37  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0994  response regulator  29.46 
 
 
380 aa  155  8e-37  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_1088  response regulator  28.87 
 
 
380 aa  154  2e-36  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4268  response regulator  29.17 
 
 
380 aa  153  5e-36  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.00568873 
 
 
-
 
NC_011725  BCB4264_A1035  response regulator  28.87 
 
 
380 aa  151  2e-35  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_0589  response regulator receiver modulated serine phosphatase  32.92 
 
 
371 aa  145  1e-33  Rhodothermus marinus DSM 4252  Bacteria  normal  0.420228  n/a   
 
 
-
 
NC_008576  Mmc1_3071  response regulator receiver protein  32.6 
 
 
390 aa  145  1e-33  Magnetococcus sp. MC-1  Bacteria  normal  hitchhiker  0.000442652 
 
 
-
 
NC_011831  Cagg_2467  response regulator receiver modulated serine phosphatase  28.91 
 
 
385 aa  142  9.999999999999999e-33  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_008789  Hhal_2157  response regulator receiver protein  27.27 
 
 
577 aa  141  1.9999999999999998e-32  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_013161  Cyan8802_0849  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  48.25 
 
 
593 aa  136  5e-31  Cyanothece sp. PCC 8802  Bacteria  normal  0.386146  normal 
 
 
-
 
NC_011726  PCC8801_0820  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  48.25 
 
 
593 aa  136  5e-31  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_008347  Mmar10_0279  response regulator receiver modulated serine phosphatase  27.89 
 
 
394 aa  137  5e-31  Maricaulis maris MCS10  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_6548  response regulator receiver sensor signal transduction histidine kinase  45.62 
 
 
397 aa  131  2.0000000000000002e-29  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.543575 
 
 
-
 
NC_007413  Ava_2149  response regulator receiver Signal transduction histidine kinase  48.18 
 
 
407 aa  131  2.0000000000000002e-29  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.142048 
 
 
-
 
NC_007413  Ava_4136  response regulator receiver Signal transduction histidine kinase  34.21 
 
 
440 aa  130  3e-29  Anabaena variabilis ATCC 29413  Bacteria  decreased coverage  0.00000660181  hitchhiker  0.00876613 
 
 
-
 
NC_009656  PSPA7_1784  putative two-component response regulator  27.78 
 
 
571 aa  130  3e-29  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_34360  Response regulator  30.49 
 
 
575 aa  130  4.0000000000000003e-29  Azotobacter vinelandii DJ  Bacteria  normal  0.328347  n/a   
 
 
-
 
NC_009767  Rcas_1114  response regulator receiver modulated serine phosphatase  30.81 
 
 
391 aa  129  6e-29  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_2152  putative response regulator, putative serine phosphatase  29.32 
 
 
434 aa  129  6e-29  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_3210  response regulator receiver modulated diguanylate cyclase  46.26 
 
 
337 aa  129  7.000000000000001e-29  Cyanothece sp. PCC 7425  Bacteria  normal  0.32327  normal  0.712325 
 
 
-
 
NC_011884  Cyan7425_0790  multi-sensor signal transduction histidine kinase  48.95 
 
 
566 aa  128  2.0000000000000002e-28  Cyanothece sp. PCC 7425  Bacteria  normal  0.391268  normal 
 
 
-
 
NC_013161  Cyan8802_1380  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  46.21 
 
 
715 aa  127  3e-28  Cyanothece sp. PCC 8802  Bacteria  normal  0.923401  normal 
 
 
-
 
NC_011726  PCC8801_1350  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  46.21 
 
 
715 aa  127  3e-28  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_007413  Ava_2150  response regulator receiver Signal transduction histidine kinase  44.52 
 
 
443 aa  125  1e-27  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.394463 
 
 
-
 
NC_007413  Ava_2562  response regulator receiver Signal transduction histidine kinase  42.66 
 
 
437 aa  125  1e-27  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_1006  response regulator receiver modulated diguanylate cyclase  55.28 
 
 
312 aa  125  1e-27  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_3451  response regulator receiver:ATP-binding region, ATPase-like:stage II sporulation E  29.13 
 
 
568 aa  124  2e-27  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.223622  normal 
 
 
-
 
NC_008044  TM1040_2887  response regulator receiver modulated serine phosphatase  26.43 
 
 
423 aa  124  2e-27  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_014248  Aazo_4229  response regulator receiver sensor signal transduction histidine kinase  45.07 
 
 
383 aa  124  2e-27  'Nostoc azollae' 0708  Bacteria  normal  0.599633  n/a   
 
 
-
 
NC_011312  VSAL_I2575  chitin degradation sensor protein  37.95 
 
 
1127 aa  124  2e-27  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_03422  hypothetical protein  36.09 
 
 
1128 aa  124  2e-27  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008686  Pden_0495  response regulator receiver protein  28.94 
 
 
423 aa  124  3e-27  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_013456  VEA_002587  chitin catabolic cascade sensor histidine kinase ChiS  36.09 
 
 
1111 aa  124  4e-27  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_1577  response regulator receiver modulated diguanylate cyclase  44.44 
 
 
314 aa  123  4e-27  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_1964  response regulator  29.06 
 
 
568 aa  123  5e-27  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.58831  n/a   
 
 
-
 
NC_014248  Aazo_4465  response regulator receiver sensor signal transduction histidine kinase  43.17 
 
 
437 aa  123  5e-27  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_2947  multi-sensor signal transduction histidine kinase  39.18 
 
 
503 aa  123  7e-27  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_013223  Dret_0825  response regulator receiver modulated serine phosphatase  26 
 
 
526 aa  122  9e-27  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.126425  normal  0.339318 
 
 
-
 
NC_011138  MADE_01717  putative response regulator  30.52 
 
 
568 aa  122  9.999999999999999e-27  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_011726  PCC8801_1844  response regulator receiver modulated serine phosphatase  27.9 
 
 
379 aa  122  9.999999999999999e-27  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013522  Taci_1373  response regulator receiver modulated metal dependent phosphohydrolase  37.66 
 
 
365 aa  122  9.999999999999999e-27  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_20780  putative two-component response regulator  26.84 
 
 
571 aa  122  9.999999999999999e-27  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.283191  normal 
 
 
-
 
NC_014248  Aazo_4225  multi-sensor hybrid histidine kinase  44.53 
 
 
1322 aa  121  1.9999999999999998e-26  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_013161  Cyan8802_1870  response regulator receiver modulated serine phosphatase  27.9 
 
 
379 aa  121  1.9999999999999998e-26  Cyanothece sp. PCC 8802  Bacteria  normal  0.177859  normal 
 
 
-
 
NC_010571  Oter_0809  response regulator receiver sensor signal transduction histidine kinase  48.82 
 
 
367 aa  121  1.9999999999999998e-26  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_2078  response regulator receiver modulated serine phosphatase  27.99 
 
 
379 aa  120  3e-26  Cyanothece sp. PCC 7425  Bacteria  normal  0.61197  normal 
 
 
-
 
NC_013457  VEA_000007  serine phosphatase RsbU regulator of sigma subunit  25.63 
 
 
397 aa  121  3e-26  Vibrio sp. Ex25  Bacteria  normal  0.441967  n/a   
 
 
-
 
NC_011146  Gbem_0731  response regulator receiver modulated serine phosphatase  29.25 
 
 
396 aa  120  3.9999999999999996e-26  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_2673  response regulator receiver modulated serine phosphatase  29.63 
 
 
389 aa  120  3.9999999999999996e-26  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_2188  response regulator receiver sensor signal transduction histidine kinase  37.37 
 
 
384 aa  120  4.9999999999999996e-26  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  0.00677544 
 
 
-
 
NC_013440  Hoch_2175  response regulator receiver sensor signal transduction histidine kinase  47.5 
 
 
395 aa  120  6e-26  Haliangium ochraceum DSM 14365  Bacteria  normal  0.924768  normal  0.400775 
 
 
-
 
NC_008576  Mmc1_3072  response regulator receiver modulated metal dependent phosphohydrolase  46.34 
 
 
353 aa  119  6e-26  Magnetococcus sp. MC-1  Bacteria  normal  hitchhiker  0.000480818 
 
 
-
 
NC_014248  Aazo_5066  response regulator receiver modulated diguanylate cyclase  52.21 
 
 
338 aa  119  7e-26  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_0978  response regulator receiver modulated diguanylate cyclase  36.82 
 
 
322 aa  119  7.999999999999999e-26  Psychromonas ingrahamii 37  Bacteria  normal  0.97362  decreased coverage  0.00116316 
 
 
-
 
NC_013161  Cyan8802_1510  response regulator receiver sensor signal transduction histidine kinase  50.85 
 
 
374 aa  119  9.999999999999999e-26  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_010627  Bphy_7700  multi-sensor signal transduction histidine kinase  45.32 
 
 
541 aa  118  9.999999999999999e-26  Burkholderia phymatum STM815  Bacteria  normal  0.163324  normal  0.507763 
 
 
-
 
NC_011726  PCC8801_1483  response regulator receiver sensor signal transduction histidine kinase  50.85 
 
 
374 aa  119  9.999999999999999e-26  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013730  Slin_2507  two component, sigma54 specific, transcriptional regulator, Fis family  45.11 
 
 
488 aa  118  9.999999999999999e-26  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.182398 
 
 
-
 
NC_010625  Bphy_6559  multi-sensor signal transduction histidine kinase  40.8 
 
 
541 aa  118  1.9999999999999998e-25  Burkholderia phymatum STM815  Bacteria  normal  normal  0.59439 
 
 
-
 
NC_008228  Patl_1594  response regulator receiver protein  28.87 
 
 
548 aa  118  1.9999999999999998e-25  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_3534  response regulator receiver protein  25.3 
 
 
393 aa  118  1.9999999999999998e-25  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_010571  Oter_3794  response regulator receiver sensor signal transduction histidine kinase  43.26 
 
 
376 aa  117  3e-25  Opitutus terrae PB90-1  Bacteria  normal  0.0277983  normal  0.543799 
 
 
-
 
NC_007520  Tcr_2179  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  39.02 
 
 
348 aa  117  3e-25  Thiomicrospira crunogena XCL-2  Bacteria  normal  0.378064  n/a   
 
 
-
 
NC_009767  Rcas_3604  putative PAS/PAC sensor protein  36.22 
 
 
619 aa  117  3.9999999999999997e-25  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.562878 
 
 
-
 
NC_009439  Pmen_2819  response regulator receiver protein  28.29 
 
 
562 aa  117  3.9999999999999997e-25  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.0360472 
 
 
-
 
NC_011729  PCC7424_5086  response regulator receiver modulated diguanylate cyclase  44.36 
 
 
465 aa  116  6e-25  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_007517  Gmet_2999  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  46.28 
 
 
361 aa  116  6.9999999999999995e-25  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.669597 
 
 
-
 
NC_007948  Bpro_2082  anti-sigma-factor antagonist domain-containing protein  28.65 
 
 
566 aa  116  6.9999999999999995e-25  Polaromonas sp. JS666  Bacteria  normal  normal  0.806146 
 
 
-
 
NC_010814  Glov_1118  response regulator receiver sensor signal transduction histidine kinase  40.74 
 
 
452 aa  116  6.9999999999999995e-25  Geobacter lovleyi SZ  Bacteria  hitchhiker  0.000972917  n/a   
 
 
-
 
NC_011831  Cagg_1830  response regulator receiver modulated diguanylate cyclase  27.27 
 
 
941 aa  116  6.9999999999999995e-25  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_2062  response regulator receiver protein  44.27 
 
 
217 aa  115  8.999999999999998e-25  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_05599  response regulator receiver  25.26 
 
 
560 aa  115  8.999999999999998e-25  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007413  Ava_1777  metal dependent phosphohydrolase, HD region with response regulator receiver modulation  48.28 
 
 
414 aa  115  8.999999999999998e-25  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_2673  response regulator receiver modulated serine phosphatase  27.81 
 
 
392 aa  115  1.0000000000000001e-24  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_3770  response regulator receiver protein  29.7 
 
 
391 aa  115  1.0000000000000001e-24  Roseiflexus sp. RS-1  Bacteria  normal  unclonable  0.0000112062 
 
 
-
 
NC_009438  Sputcn32_3141  response regulator receiver modulated metal dependent phosphohydrolase  43.26 
 
 
338 aa  115  1.0000000000000001e-24  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_0512  response regulator receiver modulated metal dependent phosphohydrolase  45.71 
 
 
368 aa  115  1.0000000000000001e-24  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00189837  n/a   
 
 
-
 
NC_009901  Spea_0629  response regulator receiver modulated metal dependent phosphohydrolase  45.45 
 
 
339 aa  115  1.0000000000000001e-24  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_1018  response regulator receiver sensor signal transduction histidine kinase  41.03 
 
 
441 aa  115  1.0000000000000001e-24  Geobacter bemidjiensis Bem  Bacteria  hitchhiker  0.00729938  n/a   
 
 
-
 
NC_011313  VSAL_II0329  putative response regulator  26.74 
 
 
415 aa  114  2.0000000000000002e-24  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_3134  response regulator receiver protein  46.92 
 
 
200 aa  115  2.0000000000000002e-24  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_3648  response regulator receiver modulated serine phosphatase  26.96 
 
 
380 aa  115  2.0000000000000002e-24  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_009052  Sbal_3504  response regulator receiver modulated metal dependent phosphohydrolase  46.97 
 
 
338 aa  114  2.0000000000000002e-24  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_2347  response regulator receiver protein  41.46 
 
 
202 aa  114  2.0000000000000002e-24  Roseiflexus sp. RS-1  Bacteria  normal  0.56815  normal 
 
 
-
 
NC_011663  Sbal223_0859  response regulator receiver modulated metal dependent phosphohydrolase  46.97 
 
 
338 aa  114  2.0000000000000002e-24  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_011138  MADE_01756  Response regulator CheB (receptor modification enzyme, protein-glutamate methylesterase)  47.5 
 
 
337 aa  114  2.0000000000000002e-24  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.844049  n/a   
 
 
-
 
NC_008345  Sfri_2505  response regulator receiver modulated metal dependent phosphohydrolase  42.11 
 
 
331 aa  115  2.0000000000000002e-24  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_010623  Bphy_4530  response regulator receiver sensor signal transduction histidine kinase  42.86 
 
 
386 aa  114  2.0000000000000002e-24  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_0836  response regulator receiver modulated metal dependent phosphohydrolase  46.97 
 
 
338 aa  114  2.0000000000000002e-24  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_0719  multi-sensor signal transduction histidine kinase  40.72 
 
 
531 aa  115  2.0000000000000002e-24  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013161  Cyan8802_3359  response regulator receiver sensor signal transduction histidine kinase  40.69 
 
 
395 aa  115  2.0000000000000002e-24  Cyanothece sp. PCC 8802  Bacteria  normal  0.361398  normal 
 
 
-
 
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