More than 300 homologs were found in PanDaTox collection
for query gene Daud_2039 on replicon NC_010424
Organism: Candidatus Desulforudis audaxviator MP104C



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010424  Daud_2039  CRP/FNR family transcriptional regulator  100 
 
 
226 aa  449  1e-125  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_0698  CRP/FNR family transcriptional regulator  57.96 
 
 
227 aa  269  2e-71  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_1633  transcriptional regulator, Crp/Fnr family  53.54 
 
 
226 aa  236  3e-61  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.391452  normal  0.0281193 
 
 
-
 
NC_007644  Moth_0824  Crp/FNR family transcriptional regulator  49.1 
 
 
225 aa  207  7e-53  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0928817  normal  0.0486748 
 
 
-
 
NC_010718  Nther_2034  transcriptional regulator, Crp/Fnr family  42.6 
 
 
243 aa  187  2e-46  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.663242  normal  0.0439569 
 
 
-
 
NC_010320  Teth514_2386  CRP/FNR family transcriptional regulator  42.08 
 
 
225 aa  185  4e-46  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_0204  Crp/Fnr family transcriptional regulator  36.82 
 
 
226 aa  142  5e-33  Thermobispora bispora DSM 43833  Bacteria  normal  0.0718939  normal 
 
 
-
 
NC_011899  Hore_09760  putative transcriptional regulator, Crp/Fnr family  34.6 
 
 
226 aa  141  8e-33  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_2750  transcriptional regulator, Crp/Fnr family  36.62 
 
 
222 aa  141  9e-33  Desulfotomaculum acetoxidans DSM 771  Bacteria  decreased coverage  0.0000000354449  normal  0.602467 
 
 
-
 
NC_011769  DvMF_0993  transcriptional regulator, Crp/Fnr family  36.32 
 
 
229 aa  136  2e-31  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.98476 
 
 
-
 
NC_008699  Noca_0339  cyclic nucleotide-binding  34.88 
 
 
225 aa  136  2e-31  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_4850  transcriptional regulator, Crp/Fnr family  35.75 
 
 
228 aa  136  3.0000000000000003e-31  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_05940  putative transcriptional regulator, Crp/Fnr family  32.88 
 
 
231 aa  135  4e-31  Halothermothrix orenii H 168  Bacteria  normal  0.558941  n/a   
 
 
-
 
NC_013530  Xcel_3038  transcriptional regulator, Crp/Fnr family  37.09 
 
 
225 aa  135  7.000000000000001e-31  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_0468  putative transcriptional regulator, Crp/Fnr family  36.97 
 
 
226 aa  134  9e-31  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.974187 
 
 
-
 
NC_011772  BCG9842_B3176  transcriptional regulator, Crp/Fnr family  33.83 
 
 
230 aa  132  3.9999999999999996e-30  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_3187  Crp/FNR family transcriptional regulator  35.48 
 
 
231 aa  132  5e-30  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.0154809 
 
 
-
 
NC_008578  Acel_1995  transcriptional regulator  36.84 
 
 
224 aa  132  5e-30  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_005945  BAS1984  Crp/FNR family transcriptional regulator  33.83 
 
 
230 aa  130  1.0000000000000001e-29  Bacillus anthracis str. Sterne  Bacteria  normal  0.513682  n/a   
 
 
-
 
NC_005957  BT9727_1958  Crp/FNR family transcriptional regulator  33.83 
 
 
230 aa  130  1.0000000000000001e-29  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0304498  n/a   
 
 
-
 
NC_006274  BCZK1936  Crp/FNR family transcriptional regulator  33.83 
 
 
230 aa  130  1.0000000000000001e-29  Bacillus cereus E33L  Bacteria  normal  0.308171  n/a   
 
 
-
 
NC_007333  Tfu_0117  cyclic nucleotide-binding: regulatory protein, Crp  34.23 
 
 
228 aa  130  1.0000000000000001e-29  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_2132  Crp/FNR family transcriptional regulator  33.83 
 
 
226 aa  130  1.0000000000000001e-29  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_3095  transcriptional regulator, Crp/Fnr family  37.44 
 
 
220 aa  130  1.0000000000000001e-29  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.0000148221 
 
 
-
 
NC_011773  BCAH820_2165  transcriptional regulator, Crp/Fnr family  33.83 
 
 
230 aa  130  1.0000000000000001e-29  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_014211  Ndas_5315  transcriptional regulator, Crp/Fnr family  33.33 
 
 
228 aa  131  1.0000000000000001e-29  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.527594 
 
 
-
 
NC_008554  Sfum_3445  Crp/FNR family transcriptional regulator  37.09 
 
 
228 aa  130  2.0000000000000002e-29  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.90711  unclonable  0.00000836213 
 
 
-
 
NC_008751  Dvul_0700  CRP/FNR family transcriptional regulator  34.7 
 
 
228 aa  130  2.0000000000000002e-29  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.259996 
 
 
-
 
NC_011658  BCAH187_A2279  transcriptional regulator, Crp/Fnr family  33.33 
 
 
230 aa  129  3e-29  Bacillus cereus AH187  Bacteria  normal  0.216294  n/a   
 
 
-
 
NC_013411  GYMC61_1592  transcriptional regulator, Crp/Fnr family  36.41 
 
 
228 aa  129  4.0000000000000003e-29  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011725  BCB4264_A2139  transcriptional regulator, Crp/Fnr family  33.33 
 
 
230 aa  129  4.0000000000000003e-29  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_1814  transcriptional regulator, Crp/Fnr family  36.02 
 
 
225 aa  128  6e-29  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_04890  cAMP-binding protein  35.55 
 
 
226 aa  128  9.000000000000001e-29  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.84759 
 
 
-
 
NC_009674  Bcer98_3398  CRP/FNR family transcriptional regulator  32.99 
 
 
230 aa  128  9.000000000000001e-29  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1975  Crp/FNR family transcriptional regulator  32.34 
 
 
230 aa  127  1.0000000000000001e-28  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_0517  transcriptional regulator, Crp/Fnr family  35.83 
 
 
224 aa  127  1.0000000000000001e-28  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_2600  Crp/FNR family transcriptional regulator  35.05 
 
 
229 aa  127  1.0000000000000001e-28  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0103419  n/a   
 
 
-
 
NC_011146  Gbem_1802  transcriptional regulator, Crp/Fnr family  31.34 
 
 
238 aa  126  2.0000000000000002e-28  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_3071  transcriptional regulator, Crp/Fnr family  35 
 
 
224 aa  125  4.0000000000000003e-28  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00222127  n/a   
 
 
-
 
NC_013721  HMPREF0424_0303  cyclic nucleotide-binding domain protein  33.8 
 
 
236 aa  125  6e-28  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.232206 
 
 
-
 
NC_011886  Achl_3176  transcriptional regulator, Crp/Fnr family  32.57 
 
 
225 aa  125  6e-28  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.231761 
 
 
-
 
NC_012803  Mlut_18280  cAMP-binding protein  33.49 
 
 
225 aa  125  6e-28  Micrococcus luteus NCTC 2665  Bacteria  normal  0.186071  n/a   
 
 
-
 
NC_013172  Bfae_26230  cAMP-binding protein  34.42 
 
 
225 aa  124  1e-27  Brachybacterium faecium DSM 4810  Bacteria  normal  0.466611  n/a   
 
 
-
 
NC_013411  GYMC61_1555  transcriptional regulator, Crp/Fnr family  31.86 
 
 
230 aa  123  2e-27  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_012669  Bcav_0608  transcriptional regulator, Crp/Fnr family  34.68 
 
 
225 aa  123  2e-27  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.847542  normal 
 
 
-
 
NC_011899  Hore_18160  putative transcriptional regulator, Crp/Fnr family  31.43 
 
 
219 aa  124  2e-27  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.000000607267  n/a   
 
 
-
 
NC_008541  Arth_3395  Crp/FNR family transcriptional regulator  32.57 
 
 
225 aa  124  2e-27  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_0435  transcriptional regulator, Crp/Fnr family  35.55 
 
 
226 aa  123  2e-27  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.376669 
 
 
-
 
NC_013169  Ksed_25400  cAMP-binding protein  36.79 
 
 
225 aa  122  4e-27  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_4102  transcriptional regulator, Crp/Fnr family  35.61 
 
 
251 aa  121  7e-27  Haliangium ochraceum DSM 14365  Bacteria  normal  0.363021  normal  0.0126572 
 
 
-
 
NC_009664  Krad_0424  putative transcriptional regulator, Crp/Fnr family  33.49 
 
 
242 aa  121  7e-27  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.24952 
 
 
-
 
NC_008148  Rxyl_1803  Crp/FNR family transcriptional regulator  31.63 
 
 
249 aa  121  8e-27  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.0808632  n/a   
 
 
-
 
NC_012918  GM21_2448  transcriptional regulator, Crp/Fnr family  30.35 
 
 
238 aa  121  8e-27  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_002936  DET0299  Crp/FNR family transcriptional regulator  32.31 
 
 
247 aa  120  9.999999999999999e-27  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_2644  Crp/FNR family transcriptional regulator  34.43 
 
 
248 aa  120  9.999999999999999e-27  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.446339  n/a   
 
 
-
 
NC_011830  Dhaf_1167  transcriptional regulator, Crp/Fnr family  28.84 
 
 
239 aa  120  9.999999999999999e-27  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.0000625437  n/a   
 
 
-
 
NC_013440  Hoch_2081  transcriptional regulator, Crp/Fnr family  31.22 
 
 
229 aa  120  1.9999999999999998e-26  Haliangium ochraceum DSM 14365  Bacteria  normal  0.264181  normal 
 
 
-
 
NC_010816  BLD_0979  cAMP-binding protein  34.3 
 
 
239 aa  119  3e-26  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_3932  transcriptional regulator, Crp/Fnr family  33.81 
 
 
224 aa  119  3e-26  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.571672  n/a   
 
 
-
 
NC_008009  Acid345_0362  Crp/FNR family transcriptional regulator  33.79 
 
 
234 aa  119  4.9999999999999996e-26  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.74387  normal  0.571703 
 
 
-
 
NC_008261  CPF_0778  Crp/FNR family transcriptional regulator  27.44 
 
 
236 aa  119  4.9999999999999996e-26  Clostridium perfringens ATCC 13124  Bacteria  hitchhiker  0.000312841  n/a   
 
 
-
 
NC_008262  CPR_0754  Crp/FNR family transcriptional regulator  27.44 
 
 
236 aa  118  6e-26  Clostridium perfringens SM101  Bacteria  decreased coverage  0.0000212493  n/a   
 
 
-
 
NC_013947  Snas_1066  transcriptional regulator, Crp/Fnr family  32.26 
 
 
225 aa  118  7.999999999999999e-26  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_0851  CRP/FNR family transcriptional regulator  29.55 
 
 
229 aa  117  1.9999999999999998e-25  Geobacter uraniireducens Rf4  Bacteria  normal  0.0183246  n/a   
 
 
-
 
NC_013216  Dtox_1944  transcriptional regulator, Crp/Fnr family  29.28 
 
 
227 aa  116  3e-25  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_5745  transcriptional regulator  31.5 
 
 
243 aa  116  3e-25  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.810963  normal 
 
 
-
 
NC_012918  GM21_3198  transcriptional regulator, Crp/Fnr family  31.77 
 
 
221 aa  116  3e-25  Geobacter sp. M21  Bacteria  n/a    normal  0.90573 
 
 
-
 
NC_010814  Glov_2803  transcriptional regulator, Crp/Fnr family  31.9 
 
 
229 aa  116  3e-25  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_2444  Crp/FNR family transcriptional regulator  27.23 
 
 
238 aa  115  3.9999999999999997e-25  Pelobacter propionicus DSM 2379  Bacteria  decreased coverage  0.000577484  n/a   
 
 
-
 
NC_009523  RoseRS_0292  CRP/FNR family transcriptional regulator  36.74 
 
 
224 aa  114  1.0000000000000001e-24  Roseiflexus sp. RS-1  Bacteria  normal  0.210312  normal  0.0189188 
 
 
-
 
NC_011146  Gbem_1063  transcriptional regulator, Crp/Fnr family  32.29 
 
 
238 aa  114  1.0000000000000001e-24  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2118  transcriptional regulator, Crp/Fnr family  31.43 
 
 
227 aa  114  2.0000000000000002e-24  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.545546  n/a   
 
 
-
 
NC_013159  Svir_36130  cAMP-binding protein  32.26 
 
 
224 aa  114  2.0000000000000002e-24  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.758224 
 
 
-
 
NC_011884  Cyan7425_2574  transcriptional regulator, Crp/Fnr family  32.11 
 
 
236 aa  113  2.0000000000000002e-24  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_0253  transcriptional regulator, Crp/Fnr family  32.38 
 
 
224 aa  113  2.0000000000000002e-24  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008025  Dgeo_0106  Crp/FNR family transcriptional regulator  28.64 
 
 
254 aa  113  3e-24  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_0092  Crp/FNR family transcriptional regulator  28.7 
 
 
230 aa  112  4.0000000000000004e-24  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.0000000552774  hitchhiker  0.0000198015 
 
 
-
 
NC_013061  Phep_2492  response regulator receiver  31.94 
 
 
352 aa  112  5e-24  Pedobacter heparinus DSM 2366  Bacteria  normal  0.570528  normal  0.0101485 
 
 
-
 
NC_002939  GSU3421  Crp/FNR family transcriptional regulator  28.84 
 
 
241 aa  112  6e-24  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_0324  Crp/FNR family transcriptional regulator  29.86 
 
 
226 aa  112  6e-24  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.105795  normal 
 
 
-
 
NC_008009  Acid345_1498  Crp/FNR family transcriptional regulator  28.11 
 
 
239 aa  112  6e-24  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.163113  normal 
 
 
-
 
NC_008146  Mmcs_4818  Crp/FNR family transcriptional regulator  32.38 
 
 
224 aa  112  6e-24  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_4904  Crp/FNR family transcriptional regulator  32.38 
 
 
224 aa  112  6e-24  Mycobacterium sp. KMS  Bacteria  normal  normal  0.385516 
 
 
-
 
NC_008726  Mvan_5435  CRP/FNR family transcriptional regulator  32.38 
 
 
224 aa  112  6e-24  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.397858 
 
 
-
 
NC_011004  Rpal_4520  transcriptional regulator, Crp/Fnr family  31.78 
 
 
236 aa  112  6e-24  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_5205  Crp/FNR family transcriptional regulator  32.38 
 
 
224 aa  112  6e-24  Mycobacterium sp. JLS  Bacteria  normal  0.703662  hitchhiker  0.000819508 
 
 
-
 
NC_009767  Rcas_0252  Crp/FNR family transcriptional regulator  37.21 
 
 
218 aa  110  1.0000000000000001e-23  Roseiflexus castenholzii DSM 13941  Bacteria  unclonable  0.00000185636  normal  0.131428 
 
 
-
 
NC_013223  Dret_1279  transcriptional regulator, Crp/Fnr family  31.36 
 
 
227 aa  110  2.0000000000000002e-23  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0123359  normal  0.583782 
 
 
-
 
NC_009338  Mflv_1371  CRP/FNR family transcriptional regulator  32.38 
 
 
224 aa  110  2.0000000000000002e-23  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.0955358 
 
 
-
 
NC_009565  TBFG_13707  Cpr/FNR family transcriptional regulator  31.9 
 
 
224 aa  110  3e-23  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.0333343 
 
 
-
 
NC_013131  Caci_8903  transcriptional regulator, Crp/Fnr family  33.49 
 
 
224 aa  109  3e-23  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_5808  transcriptional regulator, Crp/Fnr family  29.3 
 
 
231 aa  109  3e-23  Conexibacter woesei DSM 14684  Bacteria  normal  0.254135  normal  0.0101482 
 
 
-
 
NC_009943  Dole_2102  Crp/FNR family transcriptional regulator  31.4 
 
 
226 aa  109  3e-23  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000889631  n/a   
 
 
-
 
NC_002939  GSU1992  Crp/FNR family transcriptional regulator  29.11 
 
 
226 aa  108  5e-23  Geobacter sulfurreducens PCA  Bacteria  normal  0.103472  n/a   
 
 
-
 
NC_013441  Gbro_0505  cyclic nucleotide-binding protein  31.9 
 
 
224 aa  108  5e-23  Gordonia bronchialis DSM 43247  Bacteria  normal  0.287437  n/a   
 
 
-
 
NC_008262  CPR_0757  Crp/FNR family transcriptional regulator  27.52 
 
 
236 aa  108  5e-23  Clostridium perfringens SM101  Bacteria  normal  0.0100726  n/a   
 
 
-
 
NC_009012  Cthe_2775  Crp/FNR family transcriptional regulator  28.23 
 
 
232 aa  108  5e-23  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.9012  n/a   
 
 
-
 
NC_013132  Cpin_4234  transcriptional regulator, Crp/Fnr family  29.17 
 
 
248 aa  108  6e-23  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_0723  Crp/FNR family transcriptional regulator  31.19 
 
 
228 aa  108  7.000000000000001e-23  Methylobacterium sp. 4-46  Bacteria  normal  0.362046  normal  0.190371 
 
 
-
 
NC_009483  Gura_2323  CRP/FNR family transcriptional regulator  30.39 
 
 
233 aa  108  7.000000000000001e-23  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.00053006  n/a   
 
 
-
 
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