More than 300 homologs were found in PanDaTox collection
for query gene Daci_5978 on replicon NC_010002
Organism: Delftia acidovorans SPH-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010002  Daci_5978  HAD family hydrolase  100 
 
 
230 aa  464  1e-130  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.367832 
 
 
-
 
NC_011992  Dtpsy_3047  HAD-superfamily hydrolase, subfamily IA, variant 3  73.64 
 
 
226 aa  315  4e-85  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_0330  HAD family hydrolase  70 
 
 
225 aa  295  4e-79  Acidovorax sp. JS42  Bacteria  normal  normal  0.438813 
 
 
-
 
NC_008782  Ajs_3773  HAD family hydrolase  70.97 
 
 
220 aa  278  5e-74  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_4727  HAD-superfamily hydrolase, subfamily IA, variant 3  62.9 
 
 
230 aa  263  2e-69  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B1631  HAD family hydrolase  67.28 
 
 
230 aa  255  4e-67  Burkholderia xenovorans LB400  Bacteria  normal  0.318646  normal  0.223643 
 
 
-
 
NC_008781  Pnap_0467  HAD family hydrolase  65.45 
 
 
219 aa  254  6e-67  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.530029  normal 
 
 
-
 
NC_010625  Bphy_5788  HAD family hydrolase  59.63 
 
 
227 aa  251  7e-66  Burkholderia phymatum STM815  Bacteria  normal  normal  0.438539 
 
 
-
 
NC_010676  Bphyt_5016  HAD-superfamily hydrolase, subfamily IA, variant 3  69.12 
 
 
230 aa  248  6e-65  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0704684  normal  0.049198 
 
 
-
 
NC_008752  Aave_4360  HAD family hydrolase  72.48 
 
 
241 aa  237  1e-61  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_011071  Smal_2077  HAD-superfamily hydrolase, subfamily IA, variant 3  55.71 
 
 
231 aa  204  9e-52  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.0155497  normal 
 
 
-
 
NC_003295  RSc0271  hypothetical protein  49.55 
 
 
229 aa  196  4e-49  Ralstonia solanacearum GMI1000  Bacteria  normal  0.586518  normal 
 
 
-
 
NC_010682  Rpic_0122  HAD-superfamily hydrolase, subfamily IA, variant 3  48.64 
 
 
229 aa  190  2e-47  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_0130  HAD-superfamily hydrolase, subfamily IA, variant 3  48.4 
 
 
232 aa  188  7e-47  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_007347  Reut_A0142  HAD family hydrolase  47.96 
 
 
235 aa  186  4e-46  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007973  Rmet_0110  HAD family hydrolase  46.19 
 
 
227 aa  181  9e-45  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_007604  Synpcc7942_0085  HAD family hydrolase  42.24 
 
 
228 aa  172  3e-42  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_0109  HAD family hydrolase  40.62 
 
 
223 aa  164  1e-39  Anabaena variabilis ATCC 29413  Bacteria  normal  decreased coverage  0.00453013 
 
 
-
 
NC_007947  Mfla_1543  HAD family hydrolase  41.7 
 
 
218 aa  155  6e-37  Methylobacillus flagellatus KT  Bacteria  normal  normal  0.290377 
 
 
-
 
NC_008009  Acid345_0996  HAD family hydrolase  39.37 
 
 
219 aa  143  2e-33  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.0106068 
 
 
-
 
NC_009485  BBta_0045  putative haloacid dehalogenase-like hydrolase  35.37 
 
 
232 aa  140  2e-32  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.605496  normal  0.617373 
 
 
-
 
NC_011989  Avi_1080  hypothetical protein  36.84 
 
 
229 aa  137  1e-31  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_0637  HAD-superfamily hydrolase, subfamily IA, variant 3  35.84 
 
 
229 aa  135  7e-31  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.872179  normal  0.213307 
 
 
-
 
NC_009654  Mmwyl1_2542  HAD family hydrolase  36.99 
 
 
214 aa  134  8e-31  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.214098 
 
 
-
 
NC_007651  BTH_I0698  HAD-superfamily hydrolase  41.96 
 
 
232 aa  132  6e-30  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_0694  HAD-superfamily hydrolase, subfamily IA, variant 3  35.4 
 
 
229 aa  131  9e-30  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_5789  HAD-superfamily hydrolase subfamily IA, variant 3  37.38 
 
 
248 aa  130  1e-29  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.805096 
 
 
-
 
NC_007951  Bxe_A0723  HAD family hydrolase  41.18 
 
 
240 aa  130  2e-29  Burkholderia xenovorans LB400  Bacteria  normal  0.272248  normal 
 
 
-
 
NC_008836  BMA10229_A2468  HAD-superfamily hydrolase  41.44 
 
 
232 aa  129  3e-29  Burkholderia mallei NCTC 10229  Bacteria  normal  0.273983  n/a   
 
 
-
 
NC_009076  BURPS1106A_0879  HAD family hydrolase  41.44 
 
 
232 aa  129  3e-29  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_0082  HAD family hydrolase  41.44 
 
 
232 aa  129  3e-29  Burkholderia mallei NCTC 10247  Bacteria  normal  0.0196618  n/a   
 
 
-
 
NC_009636  Smed_0539  HAD family hydrolase  35.32 
 
 
231 aa  129  3e-29  Sinorhizobium medicae WSM419  Bacteria  normal  0.598939  normal  0.598645 
 
 
-
 
NC_008785  BMASAVP1_A0634  HAD-superfamily hydrolase  41.44 
 
 
232 aa  129  3e-29  Burkholderia mallei SAVP1  Bacteria  normal  0.535941  n/a   
 
 
-
 
NC_007434  BURPS1710b_1038  HAD-superfamily hydrolase  41.44 
 
 
232 aa  129  3e-29  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA0336  HAD-superfamily hydrolase  41.44 
 
 
232 aa  129  3e-29  Burkholderia mallei ATCC 23344  Bacteria  normal  0.438572  n/a   
 
 
-
 
NC_013739  Cwoe_5532  HAD-superfamily hydrolase, subfamily IA, variant 3  39.91 
 
 
214 aa  129  4e-29  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_009484  Acry_2473  HAD family hydrolase  39.09 
 
 
230 aa  129  4e-29  Acidiphilium cryptum JF-5  Bacteria  normal  0.0237734  n/a   
 
 
-
 
NC_002977  MCA0959  HAD-superfamily hydrolase, subfamily IA, variant 3 family protein  36.82 
 
 
216 aa  126  2e-28  Methylococcus capsulatus str. Bath  Bacteria  normal  0.0734377  n/a   
 
 
-
 
NC_010681  Bphyt_3243  HAD-superfamily hydrolase, subfamily IA, variant 3  39.82 
 
 
237 aa  126  3e-28  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0124526  normal  0.9958 
 
 
-
 
NC_009719  Plav_2303  HAD family hydrolase  39.53 
 
 
230 aa  126  3e-28  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.432343  normal  0.0684019 
 
 
-
 
NC_010725  Mpop_3493  HAD-superfamily hydrolase, subfamily IA, variant 3  39.09 
 
 
228 aa  126  4e-28  Methylobacterium populi BJ001  Bacteria  normal  normal  0.292984 
 
 
-
 
NC_007925  RPC_0467  HAD family hydrolase  35.59 
 
 
219 aa  125  4e-28  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.577769 
 
 
-
 
NC_013739  Cwoe_3250  HAD-superfamily hydrolase, subfamily IA, variant 3  39.81 
 
 
223 aa  125  5e-28  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.313411 
 
 
-
 
NC_010508  Bcenmc03_2616  HAD family hydrolase  42.86 
 
 
237 aa  125  7e-28  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.973469  normal 
 
 
-
 
NC_008060  Bcen_1982  HAD family hydrolase  42.01 
 
 
237 aa  124  1e-27  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.118092  n/a   
 
 
-
 
NC_013132  Cpin_5021  HAD-superfamily hydrolase, subfamily IA, variant 3  34.4 
 
 
223 aa  124  1e-27  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.886555  normal  0.11436 
 
 
-
 
NC_008542  Bcen2424_2592  HAD family hydrolase  42.01 
 
 
237 aa  124  1e-27  Burkholderia cenocepacia HI2424  Bacteria  normal  0.119238  n/a   
 
 
-
 
NC_007778  RPB_0589  HAD family hydrolase  37.1 
 
 
217 aa  124  2e-27  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_008254  Meso_0762  HAD family hydrolase  34.68 
 
 
229 aa  122  3e-27  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_2179  HAD family hydrolase  40.54 
 
 
223 aa  122  5e-27  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.812633 
 
 
-
 
NC_007510  Bcep18194_A5923  HAD family hydrolase  40.36 
 
 
228 aa  122  5e-27  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_3616  HAD-superfamily hydrolase, subfamily IA, variant 3  38.25 
 
 
228 aa  122  7e-27  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_008025  Dgeo_1330  HAD family hydrolase  39.55 
 
 
230 aa  121  1e-26  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_008783  BARBAKC583_0412  HAD family hydrolase  30.13 
 
 
230 aa  120  2e-26  Bartonella bacilliformis KC583  Bacteria  normal  0.983661  n/a   
 
 
-
 
NC_010172  Mext_3293  HAD family hydrolase  39.25 
 
 
245 aa  120  2e-26  Methylobacterium extorquens PA1  Bacteria  normal  0.567903  normal  0.782847 
 
 
-
 
NC_008390  Bamb_2640  HAD family hydrolase  41.94 
 
 
237 aa  120  2e-26  Burkholderia ambifaria AMMD  Bacteria  normal  0.576989  n/a   
 
 
-
 
NC_010505  Mrad2831_4509  HAD family hydrolase  37.5 
 
 
225 aa  119  3e-26  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_0243  HAD family hydrolase  35.19 
 
 
217 aa  119  4e-26  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_2352  HAD family hydrolase  34.09 
 
 
222 aa  119  4e-26  Sinorhizobium medicae WSM419  Bacteria  decreased coverage  0.00492029  normal 
 
 
-
 
NC_010551  BamMC406_2508  HAD family hydrolase  40.91 
 
 
237 aa  119  4e-26  Burkholderia ambifaria MC40-6  Bacteria  normal  0.076946  normal  0.415446 
 
 
-
 
NC_009074  BURPS668_0875  HAD family hydrolase  41.44 
 
 
232 aa  119  5e-26  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009505  BOV_0493  phosphoglycolate phosphatase  35.5 
 
 
228 aa  118  6e-26  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_004310  BR0489  HAD superfamily hydrolase  35.5 
 
 
228 aa  118  6e-26  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_1142  HAD-superfamily hydrolase, subfamily IA, variant 3  40.22 
 
 
231 aa  118  9e-26  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.513371  n/a   
 
 
-
 
NC_007802  Jann_0442  HAD family hydrolase  36.07 
 
 
218 aa  117  1e-25  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_009049  Rsph17029_1725  HAD family hydrolase  39.01 
 
 
228 aa  118  1e-25  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_009667  Oant_0603  HAD family hydrolase  33.77 
 
 
230 aa  116  2e-25  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.432882  n/a   
 
 
-
 
NC_008254  Meso_3783  HAD family hydrolase  33.79 
 
 
242 aa  116  3e-25  Chelativorans sp. BNC1  Bacteria  normal  0.0711244  n/a   
 
 
-
 
NC_007493  RSP_0089  hypothetical protein  39.01 
 
 
228 aa  115  4e-25  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.16166  n/a   
 
 
-
 
NC_012848  Rleg_4948  HAD-superfamily hydrolase, subfamily IA, variant 3  37.22 
 
 
223 aa  115  5e-25  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_4181  haloacid dehalogenase-like hydrolase  59.34 
 
 
99 aa  114  2e-24  Polaromonas sp. JS666  Bacteria  normal  0.66908  normal 
 
 
-
 
NC_009049  Rsph17029_2561  HAD family hydrolase  40.27 
 
 
214 aa  112  3e-24  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.467395  normal  0.978444 
 
 
-
 
NC_007493  RSP_0902  hydrolase, haloacid dehalogenase-like hydrolase  41.18 
 
 
214 aa  112  4e-24  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_008060  Bcen_2076  HAD family hydrolase  33.63 
 
 
244 aa  111  1e-23  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.140944  n/a   
 
 
-
 
NC_008542  Bcen2424_2687  HAD family hydrolase  33.63 
 
 
244 aa  111  1e-23  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_4184  HAD family hydrolase  31.31 
 
 
212 aa  111  1e-23  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_0896  HAD-superfamily hydrolase  35.45 
 
 
228 aa  110  2e-23  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_2605  HAD family hydrolase  33.78 
 
 
240 aa  110  2e-23  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_007510  Bcep18194_A6015  HAD family hydrolase  33.18 
 
 
228 aa  110  2e-23  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_009428  Rsph17025_1679  HAD family hydrolase  38.25 
 
 
228 aa  110  2e-23  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.329871  normal 
 
 
-
 
NC_009074  BURPS668_0716  haloacid dehalogenase, IA family protein  35.45 
 
 
228 aa  110  2e-23  Burkholderia pseudomallei 668  Bacteria  normal  0.93684  n/a   
 
 
-
 
NC_008836  BMA10229_A2363  HAD-superfamily hydrolase  35.45 
 
 
228 aa  109  3e-23  Burkholderia mallei NCTC 10229  Bacteria  normal  0.340076  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2715  HAD-superfamily hydrolase  35.45 
 
 
228 aa  109  3e-23  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_4640  HAD family hydrolase  37.33 
 
 
242 aa  109  3e-23  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_009080  BMA10247_2443  HAD-superfamily hydrolase  35.45 
 
 
228 aa  109  3e-23  Burkholderia mallei NCTC 10247  Bacteria  normal  0.151709  n/a   
 
 
-
 
NC_009076  BURPS1106A_0730  haloacid dehalogenase, IA family protein  35.45 
 
 
228 aa  109  3e-23  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_008061  Bcen_3728  HAD family hydrolase  37.33 
 
 
242 aa  109  3e-23  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA0231  HAD-superfamily hydrolase  35.45 
 
 
228 aa  109  3e-23  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_011080  SNSL254_A4133  6-phosphogluconate phosphatase  33.19 
 
 
221 aa  109  3e-23  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.0258255  normal 
 
 
-
 
NC_010515  Bcenmc03_5664  HAD family hydrolase  37.78 
 
 
242 aa  110  3e-23  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.665431 
 
 
-
 
NC_011205  SeD_A4240  6-phosphogluconate phosphatase  33.19 
 
 
221 aa  109  4e-23  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.0636361  normal 
 
 
-
 
NC_008390  Bamb_2741  HAD family hydrolase  33.78 
 
 
240 aa  109  4e-23  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_2716  HAD family hydrolase  33.64 
 
 
228 aa  108  5e-23  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_007651  BTH_I0596  HAD-superfamily hydrolase  35 
 
 
240 aa  108  8e-23  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009952  Dshi_0545  HAD-superfamily hydrolase  32.14 
 
 
246 aa  107  1e-22  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_3323  HAD-superfamily hydrolase, subfamily IA, variant 3  33.8 
 
 
228 aa  107  1e-22  Burkholderia phytofirmans PsJN  Bacteria  normal  0.866957  normal  0.157588 
 
 
-
 
NC_011004  Rpal_0453  HAD-superfamily hydrolase, subfamily IA, variant 3  36.22 
 
 
219 aa  108  1e-22  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009429  Rsph17025_3578  hypothetical protein  37.84 
 
 
227 aa  107  1e-22  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_010468  EcolC_4279  6-phosphogluconate phosphatase  31.56 
 
 
221 aa  107  2e-22  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_010084  Bmul_0705  HAD family hydrolase  41.47 
 
 
232 aa  107  2e-22  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.531272  normal  0.478044 
 
 
-
 
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