More than 300 homologs were found in PanDaTox collection
for query gene Daci_4297 on replicon NC_010002
Organism: Delftia acidovorans SPH-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010002  Daci_4297  methyl-accepting chemotaxis sensory transducer  100 
 
 
471 aa  917    Delftia acidovorans SPH-1  Bacteria  decreased coverage  0.00689697  normal 
 
 
-
 
NC_008752  Aave_1956  methyl-accepting chemotaxis sensory transducer  68.66 
 
 
598 aa  568  1e-160  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0136938 
 
 
-
 
NC_008752  Aave_2496  methyl-accepting chemotaxis sensory transducer  65.8 
 
 
537 aa  556  1e-157  Acidovorax citrulli AAC00-1  Bacteria  decreased coverage  0.00000862286  decreased coverage  0.00394801 
 
 
-
 
NC_008752  Aave_0428  methyl-accepting chemotaxis sensory transducer  55.51 
 
 
597 aa  434  1e-120  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_0990  methyl-accepting chemotaxis sensory transducer  68.58 
 
 
542 aa  409  1e-113  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_0354  methyl-accepting chemotaxis sensory transducer  70.25 
 
 
578 aa  403  1e-111  Acidovorax ebreus TPSY  Bacteria  normal  0.496762  n/a   
 
 
-
 
NC_007908  Rfer_1480  methyl-accepting chemotaxis sensory transducer  60.94 
 
 
537 aa  404  1e-111  Rhodoferax ferrireducens T118  Bacteria  normal  0.201713  n/a   
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  67.36 
 
 
583 aa  402  1e-111  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_008782  Ajs_0364  methyl-accepting chemotaxis sensory transducer  70.25 
 
 
580 aa  403  1e-111  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_3609  methyl-accepting chemotaxis sensory transducer  67.82 
 
 
596 aa  399  9.999999999999999e-111  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_3772  methyl-accepting chemotaxis sensory transducer  72.9 
 
 
586 aa  396  1e-109  Acidovorax sp. JS42  Bacteria  normal  0.167359  normal 
 
 
-
 
NC_007908  Rfer_3610  methyl-accepting chemotaxis sensory transducer  69.3 
 
 
511 aa  396  1e-109  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_1600  methyl-accepting chemotaxis sensory transducer  62.1 
 
 
535 aa  396  1e-109  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_2152  methyl-accepting chemotaxis sensory transducer  69.72 
 
 
589 aa  390  1e-107  Acidovorax sp. JS42  Bacteria  normal  normal  0.0117525 
 
 
-
 
NC_007908  Rfer_0925  methyl-accepting chemotaxis sensory transducer  69.71 
 
 
552 aa  388  1e-106  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_3087  methyl-accepting chemotaxis sensory transducer  65.86 
 
 
527 aa  388  1e-106  Acidovorax sp. JS42  Bacteria  normal  normal  0.823637 
 
 
-
 
NC_007908  Rfer_2749  methyl-accepting chemotaxis sensory transducer  65.09 
 
 
578 aa  382  1e-105  Rhodoferax ferrireducens T118  Bacteria  normal  0.274613  n/a   
 
 
-
 
NC_007908  Rfer_3937  methyl-accepting chemotaxis sensory transducer  69.08 
 
 
589 aa  378  1e-103  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1453  methyl-accepting chemotaxis sensory transducer  60.22 
 
 
532 aa  375  1e-102  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_1820  methyl-accepting chemotaxis sensory transducer  56.09 
 
 
553 aa  374  1e-102  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2481  methyl-accepting chemotaxis sensory transducer  65.85 
 
 
579 aa  373  1e-102  Rhodoferax ferrireducens T118  Bacteria  normal  0.37743  n/a   
 
 
-
 
NC_011992  Dtpsy_3407  methyl-accepting chemotaxis sensory transducer  62.15 
 
 
653 aa  374  1e-102  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_1417  methyl-accepting chemotaxis sensory transducer  59.33 
 
 
554 aa  373  1e-102  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.37293  n/a   
 
 
-
 
NC_008782  Ajs_4062  methyl-accepting chemotaxis sensory transducer  62.15 
 
 
653 aa  374  1e-102  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A0750  methyl-accepting chemotaxis sensory transducer  68.61 
 
 
592 aa  372  1e-101  Methylibium petroleiphilum PM1  Bacteria  normal  0.318431  normal  0.0335504 
 
 
-
 
NC_010524  Lcho_3216  methyl-accepting chemotaxis sensory transducer  66.36 
 
 
579 aa  369  1e-101  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_007908  Rfer_3137  methyl-accepting chemotaxis sensory transducer  68.23 
 
 
532 aa  371  1e-101  Rhodoferax ferrireducens T118  Bacteria  normal  0.310324  n/a   
 
 
-
 
NC_008752  Aave_4703  methyl-accepting chemotaxis sensory transducer  69.21 
 
 
659 aa  366  1e-100  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_4877  methyl-accepting chemotaxis sensory transducer  70.49 
 
 
614 aa  363  3e-99  Delftia acidovorans SPH-1  Bacteria  normal  0.296639  normal 
 
 
-
 
NC_010524  Lcho_3485  methyl-accepting chemotaxis sensory transducer  65.34 
 
 
573 aa  363  4e-99  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000328178 
 
 
-
 
NC_007404  Tbd_1620  methyl-accepting chemotaxis sensory transducer  62.69 
 
 
559 aa  362  1e-98  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.439493  normal  0.532508 
 
 
-
 
NC_008752  Aave_3880  methyl-accepting chemotaxis sensory transducer  57.87 
 
 
557 aa  360  4e-98  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_4878  methyl-accepting chemotaxis sensory transducer  67.87 
 
 
589 aa  359  5e-98  Delftia acidovorans SPH-1  Bacteria  normal  0.506831  normal 
 
 
-
 
NC_007947  Mfla_2154  methyl-accepting chemotaxis sensory transducer  55.2 
 
 
569 aa  359  6e-98  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_2296  methyl-accepting chemotaxis sensory transducer  63.66 
 
 
584 aa  353  2.9999999999999997e-96  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.604223  normal  0.776041 
 
 
-
 
NC_008752  Aave_1960  methyl-accepting chemotaxis sensory transducer  67.11 
 
 
642 aa  352  8e-96  Acidovorax citrulli AAC00-1  Bacteria  normal  0.741418  normal  0.0148687 
 
 
-
 
NC_007404  Tbd_1622  methyl-accepting chemotaxis sensory transducer  62.7 
 
 
572 aa  350  2e-95  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.415216  normal 
 
 
-
 
NC_007947  Mfla_1933  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  56.93 
 
 
598 aa  349  7e-95  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc3412  putative methyl-accepting chemotaxis I (serine chemoreceptor) transmembrane protein  66.21 
 
 
515 aa  344  2e-93  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.934147 
 
 
-
 
NC_012791  Vapar_4189  methyl-accepting chemotaxis sensory transducer  63.52 
 
 
559 aa  342  8e-93  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_3834  methyl-accepting chemotaxis sensory transducer  62.97 
 
 
595 aa  341  1e-92  Delftia acidovorans SPH-1  Bacteria  normal  0.10184  normal  0.0113192 
 
 
-
 
NC_008752  Aave_2241  methyl-accepting chemotaxis sensory transducer  63.41 
 
 
536 aa  341  2e-92  Acidovorax citrulli AAC00-1  Bacteria  unclonable  0.000000611014  hitchhiker  0.00000521325 
 
 
-
 
NC_008752  Aave_0104  methyl-accepting chemotaxis sensory transducer  62.62 
 
 
622 aa  337  2.9999999999999997e-91  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_1078  methyl-accepting chemotaxis sensory transducer  60.42 
 
 
587 aa  335  7e-91  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00101669 
 
 
-
 
NC_013421  Pecwa_4443  methyl-accepting chemotaxis sensory transducer  58.82 
 
 
630 aa  335  1e-90  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_4161  methyl-accepting chemotaxis sensory transducer  57.84 
 
 
628 aa  335  1e-90  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_0772  methyl-accepting chemotaxis sensory transducer  56.59 
 
 
612 aa  335  1e-90  Acidovorax citrulli AAC00-1  Bacteria  normal  0.343543  normal  0.663369 
 
 
-
 
NC_010625  Bphy_6699  methyl-accepting chemotaxis sensory transducer  60.19 
 
 
575 aa  334  2e-90  Burkholderia phymatum STM815  Bacteria  normal  0.198234  normal 
 
 
-
 
NC_009483  Gura_2167  methyl-accepting chemotaxis sensory transducer  60.12 
 
 
585 aa  333  4e-90  Geobacter uraniireducens Rf4  Bacteria  normal  0.38945  n/a   
 
 
-
 
NC_007404  Tbd_0660  chemotaxis sensory transducer  55.61 
 
 
586 aa  333  4e-90  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.756829  normal 
 
 
-
 
NC_008752  Aave_2436  methyl-accepting chemotaxis sensory transducer  65.07 
 
 
539 aa  333  4e-90  Acidovorax citrulli AAC00-1  Bacteria  normal  0.633872  normal 
 
 
-
 
NC_003296  RS04782  methyl-accepting chemotaxis transducer transmembrane protein  56.48 
 
 
543 aa  333  5e-90  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_5852  methyl-accepting chemotaxis sensory transducer  52.88 
 
 
618 aa  332  7.000000000000001e-90  Delftia acidovorans SPH-1  Bacteria  normal  0.217953  normal 
 
 
-
 
NC_012791  Vapar_4186  methyl-accepting chemotaxis sensory transducer  66.34 
 
 
577 aa  332  1e-89  Variovorax paradoxus S110  Bacteria  normal  0.494266  n/a   
 
 
-
 
NC_009832  Spro_0080  methyl-accepting chemotaxis sensory transducer  53.76 
 
 
642 aa  331  2e-89  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_4050  methyl-accepting chemotaxis sensory transducer  63.28 
 
 
615 aa  331  2e-89  Ralstonia pickettii 12J  Bacteria  normal  0.996584  normal 
 
 
-
 
NC_010002  Daci_3266  methyl-accepting chemotaxis sensory transducer  61.3 
 
 
650 aa  331  2e-89  Delftia acidovorans SPH-1  Bacteria  normal  0.50478  hitchhiker  0.0000385615 
 
 
-
 
NC_012857  Rpic12D_4162  methyl-accepting chemotaxis sensory transducer  63.28 
 
 
615 aa  331  2e-89  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010625  Bphy_6319  methyl-accepting chemotaxis sensory transducer  50 
 
 
549 aa  330  3e-89  Burkholderia phymatum STM815  Bacteria  normal  0.249944  normal 
 
 
-
 
NC_008825  Mpe_A2663  methyl-accepting chemotaxis sensory transducer  60.86 
 
 
520 aa  330  3e-89  Methylibium petroleiphilum PM1  Bacteria  normal  0.0198398  normal 
 
 
-
 
NC_007348  Reut_B3731  methyl-accepting chemotaxis sensory transducer  61.04 
 
 
513 aa  330  4e-89  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_3217  methyl-accepting chemotaxis sensory transducer with Cache sensor  59.76 
 
 
584 aa  330  4e-89  Geobacter sp. M21  Bacteria  n/a    normal  0.480757 
 
 
-
 
NC_012880  Dd703_1806  methyl-accepting chemotaxis sensory transducer  55.56 
 
 
652 aa  329  7e-89  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_2081  methyl-accepting chemotaxis sensory transducer  55.97 
 
 
668 aa  328  9e-89  Dickeya dadantii Ech703  Bacteria  normal  0.622232  n/a   
 
 
-
 
NC_008825  Mpe_A0586  methyl-accepting chemotaxis sensory transducer  60.57 
 
 
584 aa  328  1.0000000000000001e-88  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_1405  methyl-accepting chemotaxis sensory transducer  61.24 
 
 
548 aa  328  1.0000000000000001e-88  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_1044  methyl-accepting chemotaxis sensory transducer  59.46 
 
 
584 aa  327  2.0000000000000001e-88  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_5612  methyl-accepting chemotaxis protein II  59.31 
 
 
513 aa  328  2.0000000000000001e-88  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_0172  methyl-accepting chemotaxis sensory transducer  64.57 
 
 
550 aa  326  5e-88  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_2507  methyl-accepting chemotaxis sensory transducer  54.29 
 
 
589 aa  326  6e-88  Rhodoferax ferrireducens T118  Bacteria  normal  0.197123  n/a   
 
 
-
 
NC_012880  Dd703_1569  methyl-accepting chemotaxis sensory transducer  52.42 
 
 
554 aa  325  1e-87  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_1514  methyl-accepting chemotaxis sensory transducer  55.39 
 
 
562 aa  325  1e-87  Dickeya dadantii Ech703  Bacteria  normal  0.957025  n/a   
 
 
-
 
NC_008752  Aave_0407  methyl-accepting chemotaxis sensory transducer  63.82 
 
 
525 aa  324  2e-87  Acidovorax citrulli AAC00-1  Bacteria  normal  0.770374  normal 
 
 
-
 
NC_008752  Aave_2284  methyl-accepting chemotaxis sensory transducer  57.71 
 
 
547 aa  325  2e-87  Acidovorax citrulli AAC00-1  Bacteria  normal  0.206976  hitchhiker  0.0000952985 
 
 
-
 
NC_012791  Vapar_0687  methyl-accepting chemotaxis sensory transducer  61.8 
 
 
433 aa  324  3e-87  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1542  methyl-accepting chemotaxis sensory transducer  52.45 
 
 
566 aa  324  3e-87  Dickeya zeae Ech1591  Bacteria  normal  0.350049  n/a   
 
 
-
 
NC_010002  Daci_5410  methyl-accepting chemotaxis sensory transducer  52.21 
 
 
635 aa  323  4e-87  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_3084  methyl-accepting chemotaxis sensory transducer  56.64 
 
 
719 aa  323  6e-87  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_4354  methyl-accepting chemotaxis sensory transducer  57.19 
 
 
555 aa  322  6e-87  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_2095  methyl-accepting chemotaxis sensory transducer  58.51 
 
 
520 aa  322  9.000000000000001e-87  Ralstonia pickettii 12J  Bacteria  normal  0.649492  normal  0.265934 
 
 
-
 
NC_012912  Dd1591_0695  methyl-accepting chemotaxis sensory transducer  55.15 
 
 
561 aa  322  9.000000000000001e-87  Dickeya zeae Ech1591  Bacteria  normal  0.305861  n/a   
 
 
-
 
NC_010678  Rpic_4174  methyl-accepting chemotaxis sensory transducer  58.6 
 
 
522 aa  322  9.999999999999999e-87  Ralstonia pickettii 12J  Bacteria  normal  0.0753508  normal 
 
 
-
 
NC_007348  Reut_B4001  histidine kinase, HAMP region: chemotaxis sensory transducer  59.5 
 
 
585 aa  322  9.999999999999999e-87  Ralstonia eutropha JMP134  Bacteria  normal  0.0946714  n/a   
 
 
-
 
NC_012857  Rpic12D_4286  methyl-accepting chemotaxis sensory transducer  58.6 
 
 
522 aa  322  9.999999999999999e-87  Ralstonia pickettii 12D  Bacteria  normal  0.246906  normal  0.38481 
 
 
-
 
NC_012880  Dd703_0727  methyl-accepting chemotaxis sensory transducer  51.22 
 
 
559 aa  322  9.999999999999999e-87  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_0178  methyl-accepting chemotaxis sensory transducer  63.23 
 
 
581 aa  321  1.9999999999999998e-86  Acidovorax ebreus TPSY  Bacteria  normal  0.62004  n/a   
 
 
-
 
NC_012917  PC1_4071  methyl-accepting chemotaxis sensory transducer  56.87 
 
 
553 aa  321  1.9999999999999998e-86  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A0335  methyl-accepting chemotaxis protein I  57.5 
 
 
394 aa  321  1.9999999999999998e-86  Methylibium petroleiphilum PM1  Bacteria  normal  0.809135  normal  0.684623 
 
 
-
 
NC_012912  Dd1591_1879  methyl-accepting chemotaxis sensory transducer  52.29 
 
 
661 aa  321  1.9999999999999998e-86  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_0160  methyl-accepting chemotaxis sensory transducer  63.23 
 
 
579 aa  321  1.9999999999999998e-86  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_4183  methyl-accepting chemotaxis sensory transducer  63.12 
 
 
516 aa  321  1.9999999999999998e-86  Variovorax paradoxus S110  Bacteria  normal  0.278563  n/a   
 
 
-
 
NC_012880  Dd703_1816  methyl-accepting chemotaxis sensory transducer  55.56 
 
 
651 aa  321  1.9999999999999998e-86  Dickeya dadantii Ech703  Bacteria  normal  0.700193  n/a   
 
 
-
 
NC_003296  RSp1406  methyl-accepting chemotaxis I  61.39 
 
 
608 aa  320  3.9999999999999996e-86  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.13211 
 
 
-
 
NC_012791  Vapar_4185  methyl-accepting chemotaxis sensory transducer  59 
 
 
579 aa  320  3.9999999999999996e-86  Variovorax paradoxus S110  Bacteria  normal  0.356775  n/a   
 
 
-
 
NC_009436  Ent638_2457  methyl-accepting chemotaxis sensory transducer  57.32 
 
 
555 aa  320  5e-86  Enterobacter sp. 638  Bacteria  normal  0.890786  normal 
 
 
-
 
NC_010678  Rpic_4696  methyl-accepting chemotaxis sensory transducer  59.69 
 
 
608 aa  320  5e-86  Ralstonia pickettii 12J  Bacteria  normal  0.319993  normal  0.0826606 
 
 
-
 
NC_012857  Rpic12D_3619  methyl-accepting chemotaxis sensory transducer  59.69 
 
 
608 aa  320  5e-86  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_1771  methyl-accepting chemotaxis sensory transducer  58.2 
 
 
520 aa  319  6e-86  Ralstonia pickettii 12D  Bacteria  normal  normal  0.841752 
 
 
-
 
NC_008752  Aave_1343  methyl-accepting chemotaxis sensory transducer  64.69 
 
 
620 aa  319  6e-86  Acidovorax citrulli AAC00-1  Bacteria  normal  0.244601  normal  0.213177 
 
 
-
 
NC_011992  Dtpsy_0931  methyl-accepting chemotaxis sensory transducer  61.09 
 
 
591 aa  319  7e-86  Acidovorax ebreus TPSY  Bacteria  normal  0.269909  n/a   
 
 
-
 
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