More than 300 homologs were found in PanDaTox collection
for query gene Daci_1543 on replicon NC_010002
Organism: Delftia acidovorans SPH-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010002  Daci_1543  3-hydroxybutyrate dehydrogenase  100 
 
 
260 aa  529  1e-149  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_2220  3-hydroxybutyrate dehydrogenase  90.77 
 
 
260 aa  493  9.999999999999999e-139  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_006368  lpp2264  3-hydroxybutyrate dehydrogenase  73.46 
 
 
260 aa  409  1e-113  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_006369  lpl2236  3-hydroxybutyrate dehydrogenase  73.08 
 
 
260 aa  407  1e-113  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_009484  Acry_0494  3-hydroxybutyrate dehydrogenase  71.76 
 
 
260 aa  374  1e-103  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_2411  3-hydroxybutyrate dehydrogenase  66.54 
 
 
260 aa  365  1e-100  Burkholderia phytofirmans PsJN  Bacteria  normal  0.520745  normal  0.812558 
 
 
-
 
NC_010623  Bphy_5527  3-hydroxybutyrate dehydrogenase  65.77 
 
 
260 aa  362  5.0000000000000005e-99  Burkholderia phymatum STM815  Bacteria  normal  0.711158  normal  0.0192619 
 
 
-
 
NC_012852  Rleg_6202  3-hydroxybutyrate dehydrogenase  69.73 
 
 
260 aa  359  3e-98  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.554491 
 
 
-
 
NC_007650  BTH_II2038  3-hydroxybutyrate dehydrogenase  67.57 
 
 
262 aa  357  9e-98  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007650  BTH_II0019  3-hydroxybutyrate dehydrogenase  67.57 
 
 
261 aa  357  9.999999999999999e-98  Burkholderia thailandensis E264  Bacteria  normal  0.401096  n/a   
 
 
-
 
NC_010508  Bcenmc03_2236  3-hydroxybutyrate dehydrogenase  67.83 
 
 
262 aa  356  2.9999999999999997e-97  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008542  Bcen2424_2212  3-hydroxybutyrate dehydrogenase  67.83 
 
 
262 aa  356  2.9999999999999997e-97  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_008062  Bcen_5865  3-hydroxybutyrate dehydrogenase  67.83 
 
 
262 aa  356  2.9999999999999997e-97  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_010552  BamMC406_3125  3-hydroxybutyrate dehydrogenase  67.18 
 
 
261 aa  355  3.9999999999999996e-97  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_010515  Bcenmc03_4526  3-hydroxybutyrate dehydrogenase  67.18 
 
 
261 aa  355  3.9999999999999996e-97  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.129874  normal 
 
 
-
 
NC_008061  Bcen_5146  3-hydroxybutyrate dehydrogenase  67.18 
 
 
261 aa  355  3.9999999999999996e-97  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_5713  3-hydroxybutyrate dehydrogenase  67.18 
 
 
261 aa  355  3.9999999999999996e-97  Burkholderia cenocepacia HI2424  Bacteria  normal  0.110704  normal  0.140067 
 
 
-
 
NC_010557  BamMC406_5564  3-hydroxybutyrate dehydrogenase  65 
 
 
260 aa  354  6.999999999999999e-97  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_007435  BURPS1710b_A1918  3-hydroxybutyrate dehydrogenase  67.18 
 
 
262 aa  354  7.999999999999999e-97  Burkholderia pseudomallei 1710b  Bacteria  normal  0.883979  n/a   
 
 
-
 
NC_009075  BURPS668_A0602  3-hydroxybutyrate dehydrogenase  67.18 
 
 
262 aa  354  7.999999999999999e-97  Burkholderia pseudomallei 668  Bacteria  normal  0.602337  n/a   
 
 
-
 
NC_009078  BURPS1106A_A0505  3-hydroxybutyrate dehydrogenase  67.18 
 
 
262 aa  354  8.999999999999999e-97  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_008784  BMASAVP1_1167  3-hydroxybutyrate dehydrogenase  67.18 
 
 
261 aa  354  1e-96  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_006349  BMAA0017  3-hydroxybutyrate dehydrogenase  67.18 
 
 
261 aa  354  1e-96  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_006349  BMAA0876  3-hydroxybutyrate dehydrogenase  67.18 
 
 
267 aa  353  1e-96  Burkholderia mallei ATCC 23344  Bacteria  normal  0.462803  n/a   
 
 
-
 
NC_009079  BMA10247_A0021  3-hydroxybutyrate dehydrogenase  67.18 
 
 
261 aa  354  1e-96  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1524  3-hydroxybutyrate dehydrogenase  67.18 
 
 
261 aa  354  1e-96  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A0021  3-hydroxybutyrate dehydrogenase  67.18 
 
 
261 aa  353  1e-96  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_1447  3-hydroxybutyrate dehydrogenase  67.18 
 
 
261 aa  354  1e-96  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A0023  3-hydroxybutyrate dehydrogenase  67.18 
 
 
261 aa  354  1e-96  Burkholderia pseudomallei 668  Bacteria  normal  0.39587  n/a   
 
 
-
 
NC_010086  Bmul_5312  3-hydroxybutyrate dehydrogenase  67.18 
 
 
261 aa  353  2e-96  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_010551  BamMC406_2129  3-hydroxybutyrate dehydrogenase  67.44 
 
 
262 aa  353  2e-96  Burkholderia ambifaria MC40-6  Bacteria  normal  0.213864  normal 
 
 
-
 
NC_008390  Bamb_2250  3-hydroxybutyrate dehydrogenase  66.67 
 
 
262 aa  353  2e-96  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_008391  Bamb_4982  3-hydroxybutyrate dehydrogenase  66.41 
 
 
261 aa  353  2e-96  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_008835  BMA10229_0018  3-hydroxybutyrate dehydrogenase  66.8 
 
 
262 aa  352  2.9999999999999997e-96  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A0918  3-hydroxybutyrate dehydrogenase  66.8 
 
 
262 aa  352  2.9999999999999997e-96  Burkholderia mallei NCTC 10247  Bacteria  normal  0.11344  n/a   
 
 
-
 
NC_010084  Bmul_1065  3-hydroxybutyrate dehydrogenase  67.05 
 
 
262 aa  352  4e-96  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.110057  normal 
 
 
-
 
NC_007510  Bcep18194_A5540  3-hydroxybutyrate dehydrogenase  66.28 
 
 
262 aa  350  1e-95  Burkholderia sp. 383  Bacteria  normal  normal  0.996518 
 
 
-
 
NC_007511  Bcep18194_B3167  3-hydroxybutyrate dehydrogenase  66.02 
 
 
261 aa  350  1e-95  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_010622  Bphy_1961  3-hydroxybutyrate dehydrogenase  63.95 
 
 
265 aa  345  3e-94  Burkholderia phymatum STM815  Bacteria  normal  0.616628  normal 
 
 
-
 
NC_007951  Bxe_A3156  3-hydroxybutyrate dehydrogenase  64.09 
 
 
265 aa  345  4e-94  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.363371 
 
 
-
 
NC_010681  Bphyt_1393  3-hydroxybutyrate dehydrogenase  64.48 
 
 
265 aa  345  4e-94  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0890604  hitchhiker  0.00200504 
 
 
-
 
NC_012857  Rpic12D_4380  3-hydroxybutyrate dehydrogenase  64.73 
 
 
261 aa  344  7e-94  Ralstonia pickettii 12D  Bacteria  normal  0.209201  normal  0.21753 
 
 
-
 
NC_010678  Rpic_4270  3-hydroxybutyrate dehydrogenase  64.73 
 
 
261 aa  344  7e-94  Ralstonia pickettii 12J  Bacteria  normal  0.149446  normal  0.650814 
 
 
-
 
NC_003296  RS02396  3-hydroxybutyrate dehydrogenase  64.34 
 
 
261 aa  343  2e-93  Ralstonia solanacearum GMI1000  Bacteria  normal  0.613287  normal 
 
 
-
 
NC_007204  Psyc_1428  3-hydroxybutyrate dehydrogenase  62.02 
 
 
266 aa  343  2e-93  Psychrobacter arcticus 273-4  Bacteria  normal  0.818194  normal  0.295286 
 
 
-
 
NC_007969  Pcryo_1592  3-hydroxybutyrate dehydrogenase  62.02 
 
 
266 aa  342  5e-93  Psychrobacter cryohalolentis K5  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_0088  3-hydroxybutyrate dehydrogenase  59.23 
 
 
259 aa  333  2e-90  Marinobacter aquaeolei VT8  Bacteria  normal  0.791092  n/a   
 
 
-
 
NC_009524  PsycPRwf_1704  3-hydroxybutyrate dehydrogenase  60.47 
 
 
265 aa  329  2e-89  Psychrobacter sp. PRwf-1  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_3319  d-beta-hydroxybutyrate dehydrogenase  44.53 
 
 
256 aa  200  1.9999999999999998e-50  Agrobacterium vitis S4  Bacteria  normal  0.0697406  n/a   
 
 
-
 
NC_013946  Mrub_1680  3-hydroxybutyrate dehydrogenase  43.46 
 
 
252 aa  200  1.9999999999999998e-50  Meiothermus ruber DSM 1279  Bacteria  normal  0.509013  normal  0.120385 
 
 
-
 
NC_011831  Cagg_3770  3-hydroxybutyrate dehydrogenase  40.78 
 
 
252 aa  194  1e-48  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_010581  Bind_2696  3-hydroxybutyrate dehydrogenase  42.41 
 
 
260 aa  193  2e-48  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.262261  normal  0.672061 
 
 
-
 
NC_010725  Mpop_5269  3-hydroxybutyrate dehydrogenase  40.84 
 
 
261 aa  193  3e-48  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_3482  3-hydroxybutyrate dehydrogenase  41.6 
 
 
261 aa  192  4e-48  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.059744  normal  0.189597 
 
 
-
 
NC_009620  Smed_4500  3-hydroxybutyrate dehydrogenase  42.59 
 
 
258 aa  192  5e-48  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.0782266 
 
 
-
 
NC_011757  Mchl_5197  3-hydroxybutyrate dehydrogenase  40.84 
 
 
261 aa  192  7e-48  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.426896 
 
 
-
 
NC_010172  Mext_4730  3-hydroxybutyrate dehydrogenase  40.84 
 
 
261 aa  192  7e-48  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_3432  3-hydroxybutyrate dehydrogenase  45.08 
 
 
261 aa  191  1e-47  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.296547 
 
 
-
 
NC_007963  Csal_1825  3-hydroxybutyrate dehydrogenase  41.96 
 
 
258 aa  190  2e-47  Chromohalobacter salexigens DSM 3043  Bacteria  hitchhiker  0.00469409  n/a   
 
 
-
 
NC_008254  Meso_3335  3-hydroxybutyrate dehydrogenase  43.19 
 
 
260 aa  189  2.9999999999999997e-47  Chelativorans sp. BNC1  Bacteria  normal  0.175664  n/a   
 
 
-
 
NC_014212  Mesil_2335  3-hydroxybutyrate dehydrogenase  41.54 
 
 
252 aa  189  5e-47  Meiothermus silvanus DSM 9946  Bacteria  normal  0.734906  normal 
 
 
-
 
NC_010581  Bind_3009  3-hydroxybutyrate dehydrogenase  42.08 
 
 
261 aa  187  1e-46  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.0803108 
 
 
-
 
NC_007794  Saro_1750  3-hydroxybutyrate dehydrogenase  42.47 
 
 
261 aa  187  1e-46  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.594296  n/a   
 
 
-
 
NC_007964  Nham_3554  3-hydroxybutyrate dehydrogenase  42.37 
 
 
262 aa  187  2e-46  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_1887  3-hydroxybutyrate dehydrogenase  42.41 
 
 
260 aa  185  7e-46  Xanthobacter autotrophicus Py2  Bacteria  normal  0.0166984  normal 
 
 
-
 
NC_010511  M446_4798  3-hydroxybutyrate dehydrogenase  40.54 
 
 
261 aa  185  8e-46  Methylobacterium sp. 4-46  Bacteria  normal  hitchhiker  0.000904747 
 
 
-
 
NC_011894  Mnod_4591  3-hydroxybutyrate dehydrogenase  40.6 
 
 
261 aa  184  8e-46  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_1324  D-beta-hydroxybutyrate dehydrogenase  39.22 
 
 
260 aa  184  1.0000000000000001e-45  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_0442  short-chain dehydrogenase/reductase SDR  39.76 
 
 
253 aa  184  2.0000000000000003e-45  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_013169  Ksed_10310  3-hydroxybutyrate dehydrogenase  43.24 
 
 
263 aa  184  2.0000000000000003e-45  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.998138  normal 
 
 
-
 
NC_012850  Rleg_3132  3-hydroxybutyrate dehydrogenase  40.62 
 
 
258 aa  182  4.0000000000000006e-45  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0908587  normal 
 
 
-
 
NC_008228  Patl_1976  3-hydroxybutyrate dehydrogenase  40.39 
 
 
261 aa  182  4.0000000000000006e-45  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_011887  Mnod_8088  3-hydroxybutyrate dehydrogenase  42.47 
 
 
277 aa  181  8.000000000000001e-45  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_008048  Sala_0938  3-hydroxybutyrate dehydrogenase  41.7 
 
 
261 aa  181  1e-44  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.60557  normal 
 
 
-
 
NC_011369  Rleg2_2860  3-hydroxybutyrate dehydrogenase  40.8 
 
 
258 aa  180  2e-44  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.0187623  normal  0.981149 
 
 
-
 
NC_003910  CPS_4091  D-beta-hydroxybutyrate dehydrogenase  38.91 
 
 
258 aa  179  2.9999999999999997e-44  Colwellia psychrerythraea 34H  Bacteria  normal  0.894673  n/a   
 
 
-
 
NC_007958  RPD_1388  3-hydroxybutyrate dehydrogenase  39.62 
 
 
262 aa  178  7e-44  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_6971  D-beta-hydroxybutyrate dehydrogenase  40.46 
 
 
263 aa  177  1e-43  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_013205  Aaci_0240  3-hydroxybutyrate dehydrogenase  39.23 
 
 
261 aa  177  1e-43  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.67492  n/a   
 
 
-
 
NC_011138  MADE_02266  putative 3-hydroxybutyrate dehydrogenase  38.43 
 
 
255 aa  176  2e-43  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_4481  3-hydroxybutyrate dehydrogenase  40 
 
 
265 aa  177  2e-43  Caulobacter sp. K31  Bacteria  normal  0.643643  normal  0.795745 
 
 
-
 
NC_008148  Rxyl_2343  3-hydroxybutyrate dehydrogenase  41.02 
 
 
262 aa  176  4e-43  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS3941  3-hydroxybutyrate dehydrogenase  35.94 
 
 
258 aa  175  6e-43  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_4249  3-hydroxybutyrate dehydrogenase  35.94 
 
 
258 aa  175  6e-43  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_007406  Nwi_2755  3-hydroxybutyrate dehydrogenase  40.23 
 
 
262 aa  175  7e-43  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.137616  normal  0.463862 
 
 
-
 
NC_011773  BCAH820_4051  3-hydroxybutyrate dehydrogenase  35.94 
 
 
258 aa  175  7e-43  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_011658  BCAH187_A4157  3-hydroxybutyrate dehydrogenase  35.94 
 
 
258 aa  174  9e-43  Bacillus cereus AH187  Bacteria  normal  0.212799  n/a   
 
 
-
 
NC_010717  PXO_00926  D-beta-hydroxybutyrate dehydrogenase  40.87 
 
 
252 aa  174  9.999999999999999e-43  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0885199  n/a   
 
 
-
 
NC_007778  RPB_1408  3-hydroxybutyrate dehydrogenase  39.62 
 
 
281 aa  174  1.9999999999999998e-42  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_011772  BCG9842_B1101  3-hydroxybutyrate dehydrogenase  35.55 
 
 
258 aa  174  1.9999999999999998e-42  Bacillus cereus G9842  Bacteria  normal  normal  0.845922 
 
 
-
 
NC_008025  Dgeo_0952  short-chain dehydrogenase/reductase SDR  37.65 
 
 
258 aa  172  2.9999999999999996e-42  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.0412678  normal  0.59225 
 
 
-
 
NC_011004  Rpal_4687  3-hydroxybutyrate dehydrogenase  38.85 
 
 
262 aa  172  3.9999999999999995e-42  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009952  Dshi_1544  short-chain dehydrogenase/reductase family protein  40.93 
 
 
257 aa  172  3.9999999999999995e-42  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.0575047  normal  0.138596 
 
 
-
 
NC_004310  BR1779  D-beta-hydroxybutyrate dehydrogenase, putative  39.37 
 
 
263 aa  172  5e-42  Brucella suis 1330  Bacteria  normal  0.695225  n/a   
 
 
-
 
NC_005957  BT9727_3773  3-hydroxybutyrate dehydrogenase  35.55 
 
 
258 aa  172  5.999999999999999e-42  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_0081  3-hydroxybutyrate dehydrogenase  40.47 
 
 
271 aa  172  5.999999999999999e-42  Thermobifida fusca YX  Bacteria  normal  0.243269  n/a   
 
 
-
 
NC_007925  RPC_4002  3-hydroxybutyrate dehydrogenase  39.15 
 
 
262 aa  172  5.999999999999999e-42  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.36944 
 
 
-
 
NC_003909  BCE_4084  3-hydroxybutyrate dehydrogenase  35 
 
 
262 aa  172  6.999999999999999e-42  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011666  Msil_0811  3-hydroxybutyrate dehydrogenase  40.54 
 
 
261 aa  171  9e-42  Methylocella silvestris BL2  Bacteria  n/a    normal  0.110445 
 
 
-
 
NC_007908  Rfer_2069  3-hydroxybutyrate dehydrogenase  40.31 
 
 
256 aa  170  2e-41  Rhodoferax ferrireducens T118  Bacteria  normal  0.343315  n/a   
 
 
-
 
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