17 homologs were found in PanDaTox collection
for query gene Daci_1306 on replicon NC_010002
Organism: Delftia acidovorans SPH-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010002  Daci_1306  fimbrial assembly family protein  100 
 
 
351 aa  694    Delftia acidovorans SPH-1  Bacteria  normal  0.838759  decreased coverage  0.00904381 
 
 
-
 
NC_008752  Aave_4153  fimbrial assembly family protein  39.32 
 
 
437 aa  193  3e-48  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0256547  hitchhiker  0.0000649837 
 
 
-
 
NC_008786  Veis_0681  fimbrial assembly family protein  34.26 
 
 
382 aa  138  2e-31  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.0346552  normal  0.0111524 
 
 
-
 
NC_007964  Nham_0734  fimbrial assembly  24.54 
 
 
352 aa  64.7  0.000000002  Nitrobacter hamburgensis X14  Bacteria  normal  0.0675563  n/a   
 
 
-
 
NC_002977  MCA1121  general secretion pathway protein l, putative  25.28 
 
 
372 aa  63.5  0.000000005  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_3002  fimbrial assembly  25.09 
 
 
356 aa  63.2  0.000000006  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.579597  normal  0.0109704 
 
 
-
 
NC_009720  Xaut_2114  fimbrial assembly family protein  30.91 
 
 
359 aa  57.8  0.0000003  Xanthobacter autotrophicus Py2  Bacteria  normal  0.0463917  normal 
 
 
-
 
NC_011365  Gdia_1521  Fimbrial assembly family protein  24.91 
 
 
332 aa  57.4  0.0000004  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.0573904  normal  0.217678 
 
 
-
 
NC_007484  Noc_0758  general secretion pathway protein L  24.2 
 
 
373 aa  54.7  0.000002  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.0966219  n/a   
 
 
-
 
NC_011071  Smal_0553  Fimbrial assembly family protein  24.63 
 
 
379 aa  55.1  0.000002  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.0642076 
 
 
-
 
NC_011666  Msil_0917  Fimbrial assembly family protein  22.45 
 
 
377 aa  52.8  0.000009  Methylocella silvestris BL2  Bacteria  n/a    normal  0.51351 
 
 
-
 
NC_008554  Sfum_3660  fimbrial assembly family protein  26.94 
 
 
509 aa  50.4  0.00004  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_1285  putative general secretion pathway protein L, GspL  29.11 
 
 
357 aa  50.1  0.00005  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.442557  normal 
 
 
-
 
NC_010577  XfasM23_0776  fimbrial assembly family protein  23.96 
 
 
378 aa  47.8  0.0003  Xylella fastidiosa M23  Bacteria  normal  0.0393461  n/a   
 
 
-
 
NC_009485  BBta_2619  putative general secretion pathway protein L  29.91 
 
 
365 aa  47.8  0.0003  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_010513  Xfasm12_0863  general secretory pathway protein L  22.37 
 
 
378 aa  46.6  0.0007  Xylella fastidiosa M12  Bacteria  hitchhiker  0.00948557  n/a   
 
 
-
 
NC_010717  PXO_02683  general secretion pathway protein L  25.71 
 
 
373 aa  46.2  0.0009  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
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