More than 300 homologs were found in PanDaTox collection
for query gene Daci_0088 on replicon NC_010002
Organism: Delftia acidovorans SPH-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010002  Daci_0088  acyl-CoA dehydrogenase domain-containing protein  100 
 
 
385 aa  776    Delftia acidovorans SPH-1  Bacteria  normal  0.745656  normal 
 
 
-
 
NC_008786  Veis_4040  acyl-CoA dehydrogenase domain-containing protein  81.09 
 
 
410 aa  644    Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.572322  normal 
 
 
-
 
NC_008782  Ajs_0061  acyl-CoA dehydrogenase domain-containing protein  86.23 
 
 
385 aa  683    Acidovorax sp. JS42  Bacteria  normal  0.957206  normal 
 
 
-
 
NC_009511  Swit_3274  acyl-CoA dehydrogenase domain-containing protein  64.84 
 
 
399 aa  501  1e-141  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.220833 
 
 
-
 
NC_009427  Saro_3624  acyl-CoA dehydrogenase domain-containing protein  65.01 
 
 
381 aa  501  1e-141  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_4074  acyl-CoA dehydrogenase-like protein  66.67 
 
 
386 aa  501  1e-141  Cupriavidus metallidurans CH34  Bacteria  normal  0.0382192  normal 
 
 
-
 
NC_007974  Rmet_5144  putative acyl-CoA dehydrogenase  64.49 
 
 
385 aa  502  1e-141  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.16071 
 
 
-
 
NC_007348  Reut_B3557  Acyl-CoA dehydrogenase, central region  65.71 
 
 
386 aa  494  1e-139  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007509  Bcep18194_C7127  Acyl-CoA dehydrogenase  64.32 
 
 
385 aa  493  9.999999999999999e-139  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_007953  Bxe_C0207  putative acyl-CoA dehydrogenase  65.12 
 
 
387 aa  489  1e-137  Burkholderia xenovorans LB400  Bacteria  normal  0.698342  normal  0.648676 
 
 
-
 
NC_007952  Bxe_B2737  putative acyl-CoA dehydrogenase  63.54 
 
 
385 aa  483  1e-135  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B4563  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  60.16 
 
 
387 aa  470  1.0000000000000001e-131  Ralstonia eutropha JMP134  Bacteria  normal  0.131003  n/a   
 
 
-
 
NC_007953  Bxe_C0605  putative acyl-CoA dehydrogenase  57.78 
 
 
382 aa  426  1e-118  Burkholderia xenovorans LB400  Bacteria  decreased coverage  0.00592793  normal  0.0752366 
 
 
-
 
NC_009719  Plav_0924  acyl-CoA dehydrogenase domain-containing protein  51.06 
 
 
383 aa  386  1e-106  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_5357  putative acyl-CoA dehydrogenase  53.68 
 
 
383 aa  383  1e-105  Cupriavidus metallidurans CH34  Bacteria  normal  0.0369214  normal 
 
 
-
 
NC_010338  Caul_1895  acyl-CoA dehydrogenase domain-containing protein  52.07 
 
 
383 aa  371  1e-101  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_3810  acyl-CoA dehydrogenase domain protein  51.88 
 
 
386 aa  356  5e-97  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.492901  n/a   
 
 
-
 
NC_008048  Sala_1240  acyl-CoA dehydrogenase-like protein  50.53 
 
 
640 aa  352  5.9999999999999994e-96  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.485103  normal 
 
 
-
 
NC_010505  Mrad2831_3260  acyl-CoA dehydrogenase domain-containing protein  52.12 
 
 
383 aa  344  2e-93  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_0079  acyl-CoA dehydrogenase domain protein  49.19 
 
 
380 aa  325  7e-88  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_007336  Reut_C6298  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  45.97 
 
 
379 aa  322  8e-87  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_3278  acyl-CoA dehydrogenase-like  44.39 
 
 
383 aa  315  8e-85  Chelativorans sp. BNC1  Bacteria  normal  0.827107  n/a   
 
 
-
 
NC_013757  Gobs_3772  acyl-CoA dehydrogenase domain protein  46.56 
 
 
378 aa  311  2e-83  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.717662  n/a   
 
 
-
 
NC_013441  Gbro_0907  acyl-CoA dehydrogenase domain protein  45.84 
 
 
374 aa  308  2.0000000000000002e-82  Gordonia bronchialis DSM 43247  Bacteria  normal  0.731697  n/a   
 
 
-
 
NC_008726  Mvan_3917  acyl-CoA dehydrogenase domain-containing protein  48.54 
 
 
381 aa  305  8.000000000000001e-82  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0198331  normal 
 
 
-
 
NC_009485  BBta_7535  putative acyl-CoA dehydrogenase  44.88 
 
 
385 aa  305  1.0000000000000001e-81  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_5166  Fis family transcriptional regulator  47.47 
 
 
382 aa  300  2e-80  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.170532 
 
 
-
 
NC_008726  Mvan_2876  acyl-CoA dehydrogenase domain-containing protein  46.7 
 
 
383 aa  300  2e-80  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0157602  normal 
 
 
-
 
NC_007958  RPD_0271  acyl-CoA dehydrogenase-like  43.78 
 
 
386 aa  300  3e-80  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.360882 
 
 
-
 
NC_011004  Rpal_0482  acyl-CoA dehydrogenase domain protein  43.78 
 
 
386 aa  298  1e-79  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.708423  n/a   
 
 
-
 
NC_007778  RPB_0558  Acyl-CoA dehydrogenase-like  44.44 
 
 
386 aa  297  2e-79  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.58726  normal  0.0406105 
 
 
-
 
NC_008146  Mmcs_0213  acyl-CoA dehydrogenase-like protein  45.04 
 
 
385 aa  279  6e-74  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0223  acyl-CoA dehydrogenase domain-containing protein  45.04 
 
 
408 aa  278  8e-74  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_2499  acyl-CoA dehydrogenase domain protein  42.97 
 
 
371 aa  278  2e-73  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.000304997  n/a   
 
 
-
 
NC_009077  Mjls_0203  acyl-CoA dehydrogenase domain-containing protein  44.77 
 
 
385 aa  276  4e-73  Mycobacterium sp. JLS  Bacteria  normal  normal  0.672211 
 
 
-
 
NC_009077  Mjls_4154  acyl-CoA dehydrogenase domain-containing protein  44.06 
 
 
384 aa  263  4e-69  Mycobacterium sp. JLS  Bacteria  normal  0.041099  normal  0.843392 
 
 
-
 
NC_007973  Rmet_0845  acyl-CoA dehydrogenase-like protein  39.26 
 
 
398 aa  209  6e-53  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.444844 
 
 
-
 
NC_010084  Bmul_1045  acyl-CoA dehydrogenase domain-containing protein  38.51 
 
 
398 aa  201  1.9999999999999998e-50  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.0868009  normal  0.228879 
 
 
-
 
NC_007510  Bcep18194_A5560  Acyl-CoA dehydrogenase  37.83 
 
 
398 aa  199  6e-50  Burkholderia sp. 383  Bacteria  normal  normal  0.198235 
 
 
-
 
NC_010508  Bcenmc03_2256  acyl-CoA dehydrogenase domain-containing protein  35.18 
 
 
398 aa  199  9e-50  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_5530  acyl-CoA dehydrogenase  34.09 
 
 
386 aa  198  1.0000000000000001e-49  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_008060  Bcen_1620  acyl-CoA dehydrogenase-like  34.92 
 
 
398 aa  197  2.0000000000000003e-49  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_2232  acyl-CoA dehydrogenase domain-containing protein  34.92 
 
 
398 aa  197  2.0000000000000003e-49  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_1307  acyl-CoA dehydrogenase  34.92 
 
 
398 aa  196  4.0000000000000005e-49  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_0430  acyl-CoA dehydrogenase  34.92 
 
 
398 aa  196  8.000000000000001e-49  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_1453  putative acyl-CoA dehydrogenase family protein  34.92 
 
 
398 aa  196  8.000000000000001e-49  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_1316  acyl-CoA dehydrogenase  34.92 
 
 
398 aa  196  8.000000000000001e-49  Burkholderia pseudomallei 1106a  Bacteria  normal  0.23333  n/a   
 
 
-
 
NC_008836  BMA10229_A0720  acyl-CoA dehydrogenase domain-containing protein  34.92 
 
 
398 aa  196  8.000000000000001e-49  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A1147  acyl-CoA dehydrogenase  34.92 
 
 
398 aa  196  8.000000000000001e-49  Burkholderia mallei SAVP1  Bacteria  normal  0.383138  n/a   
 
 
-
 
NC_010551  BamMC406_2149  acyl-CoA dehydrogenase domain-containing protein  37.61 
 
 
398 aa  196  8.000000000000001e-49  Burkholderia ambifaria MC40-6  Bacteria  normal  0.324611  normal  0.360268 
 
 
-
 
NC_009719  Plav_0496  acyl-CoA dehydrogenase domain-containing protein  34.15 
 
 
400 aa  195  9e-49  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.954912  normal 
 
 
-
 
NC_008390  Bamb_2270  acyl-CoA dehydrogenase domain-containing protein  37.61 
 
 
398 aa  194  2e-48  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I1078  acyl-CoA dehydrogenase domain-containing protein  38.05 
 
 
398 aa  193  4e-48  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_010512  Bcenmc03_6851  acyl-CoA dehydrogenase domain-containing protein  34.32 
 
 
399 aa  192  9e-48  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_1874  acyl-CoA dehydrogenase domain protein  34.6 
 
 
398 aa  191  2e-47  Ralstonia pickettii 12D  Bacteria  normal  normal  0.400233 
 
 
-
 
NC_010682  Rpic_2197  acyl-CoA dehydrogenase domain protein  35.25 
 
 
398 aa  190  2.9999999999999997e-47  Ralstonia pickettii 12J  Bacteria  normal  normal  0.34264 
 
 
-
 
NC_010681  Bphyt_1362  acyl-CoA dehydrogenase domain protein  34.72 
 
 
398 aa  190  4e-47  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0703001  decreased coverage  0.000728046 
 
 
-
 
NC_013595  Sros_8197  acyl-CoA dehydrogenase protein  32.72 
 
 
384 aa  189  5.999999999999999e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009427  Saro_3780  acyl-CoA dehydrogenase domain-containing protein  36.29 
 
 
374 aa  189  5.999999999999999e-47  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_0842  acyl-CoA dehydrogenase domain protein  36.39 
 
 
402 aa  188  1e-46  Variovorax paradoxus S110  Bacteria  normal  0.0566206  n/a   
 
 
-
 
NC_008786  Veis_4958  acyl-CoA dehydrogenase domain-containing protein  38.02 
 
 
397 aa  188  1e-46  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_3018  acyl-CoA dehydrogenase domain protein  35.07 
 
 
403 aa  187  2e-46  Acidovorax ebreus TPSY  Bacteria  normal  0.162676  n/a   
 
 
-
 
NC_011004  Rpal_1429  acyl-CoA dehydrogenase domain protein  33.68 
 
 
398 aa  187  3e-46  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_2889  acyl-CoA dehydrogenase domain-containing protein  36.81 
 
 
402 aa  187  3e-46  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.222228  normal 
 
 
-
 
NC_009719  Plav_1807  acyl-CoA dehydrogenase domain-containing protein  33.66 
 
 
399 aa  186  4e-46  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.167167  normal 
 
 
-
 
NC_010551  BamMC406_2795  acyl-CoA dehydrogenase domain-containing protein  36.36 
 
 
398 aa  186  4e-46  Burkholderia ambifaria MC40-6  Bacteria  normal  0.174567  normal 
 
 
-
 
NC_008782  Ajs_3737  acyl-CoA dehydrogenase domain-containing protein  35.07 
 
 
403 aa  186  4e-46  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_008048  Sala_0875  acyl-CoA dehydrogenase-like protein  36.11 
 
 
383 aa  187  4e-46  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_008390  Bamb_2933  acyl-CoA dehydrogenase domain-containing protein  36.36 
 
 
398 aa  187  4e-46  Burkholderia ambifaria AMMD  Bacteria  normal  0.26502  n/a   
 
 
-
 
NC_007651  BTH_I0394  acyl-CoA dehydrogenase domain-containing protein  33.9 
 
 
403 aa  186  5e-46  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_0499  acyl-CoA dehydrogenase domain-containing protein  39.61 
 
 
452 aa  186  6e-46  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.504662  normal 
 
 
-
 
NC_003295  RSc2045  putative acyl-CoA dehydrogenase oxidoreductase protein  34.6 
 
 
398 aa  186  7e-46  Ralstonia solanacearum GMI1000  Bacteria  normal  0.257916  normal  0.141872 
 
 
-
 
NC_007778  RPB_1238  Acyl-CoA dehydrogenase-like  33.08 
 
 
398 aa  186  7e-46  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_008060  Bcen_2264  acyl-CoA dehydrogenase-like  33.5 
 
 
402 aa  186  7e-46  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.0525732  n/a   
 
 
-
 
NC_008542  Bcen2424_2878  acyl-CoA dehydrogenase domain-containing protein  33.5 
 
 
402 aa  186  7e-46  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
CP001800  Ssol_2123  acyl-CoA dehydrogenase domain protein  37.21 
 
 
363 aa  185  9e-46  Sulfolobus solfataricus 98/2  Archaea  unclonable  0.000012052  n/a   
 
 
-
 
NC_007347  Reut_A0978  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  33.92 
 
 
400 aa  185  1.0000000000000001e-45  Ralstonia eutropha JMP134  Bacteria  normal  0.915118  n/a   
 
 
-
 
NC_007958  RPD_4007  acyl-CoA dehydrogenase-like  33.42 
 
 
398 aa  185  1.0000000000000001e-45  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_2018  acyl-CoA dehydrogenase domain-containing protein  35.33 
 
 
411 aa  184  2.0000000000000003e-45  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.642987 
 
 
-
 
NC_007951  Bxe_A3192  putative pimeloyl-CoA dehydrogenase (large subunit), PimC-like  36.63 
 
 
398 aa  184  2.0000000000000003e-45  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_2737  acyl-CoA dehydrogenase domain protein  35.78 
 
 
402 aa  184  3e-45  Burkholderia phytofirmans PsJN  Bacteria  normal  0.944571  normal 
 
 
-
 
NC_007951  Bxe_A1390  putative acyl-CoA dehydrogenase  35.69 
 
 
416 aa  184  3e-45  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.342556 
 
 
-
 
NC_008752  Aave_4313  acyl-CoA dehydrogenase domain-containing protein  36.39 
 
 
402 aa  183  3e-45  Acidovorax citrulli AAC00-1  Bacteria  normal  0.168466  normal  0.322728 
 
 
-
 
NC_010622  Bphy_1992  acyl-CoA dehydrogenase domain-containing protein  36.71 
 
 
398 aa  183  4.0000000000000006e-45  Burkholderia phymatum STM815  Bacteria  normal  0.11361  normal  0.377898 
 
 
-
 
NC_010084  Bmul_0425  acyl-CoA dehydrogenase domain-containing protein  36.58 
 
 
400 aa  183  4.0000000000000006e-45  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.735968  normal  0.979961 
 
 
-
 
NC_007434  BURPS1710b_0635  acyl-CoA dehydrogenase domain-containing protein  36.05 
 
 
402 aa  182  6e-45  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A1383  acyl-CoA dehydrogenase domain-containing protein  36.05 
 
 
402 aa  183  6e-45  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A0209  acyl-CoA dehydrogenase domain-containing protein  36.05 
 
 
402 aa  183  6e-45  Burkholderia mallei SAVP1  Bacteria  normal  0.150143  n/a   
 
 
-
 
NC_009076  BURPS1106A_0471  acyl-CoA dehydrogenase domain-containing protein  36.05 
 
 
402 aa  183  6e-45  Burkholderia pseudomallei 1106a  Bacteria  normal  0.367383  n/a   
 
 
-
 
NC_009074  BURPS668_0451  acyl-CoA dehydrogenase domain-containing protein  36.05 
 
 
402 aa  182  6e-45  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_2810  acyl-CoA dehydrogenase domain-containing protein  36.05 
 
 
402 aa  183  6e-45  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_4235  pimeloyl-CoA dehydrogenase, large subunit  32 
 
 
396 aa  182  7e-45  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_1468  Acyl-CoA dehydrogenase  36.68 
 
 
716 aa  182  1e-44  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_5149  putative acyl-CoA dehydrogenase  34.01 
 
 
393 aa  181  1e-44  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.195919  normal  0.0612186 
 
 
-
 
NC_009077  Mjls_4096  acyl-CoA dehydrogenase domain-containing protein  35.31 
 
 
396 aa  182  1e-44  Mycobacterium sp. JLS  Bacteria  normal  0.0624184  normal 
 
 
-
 
NC_007958  RPD_3550  acyl-CoA dehydrogenase-like  32.18 
 
 
396 aa  181  1e-44  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_0233  pimeloyl-CoA dehydrogenase, large subunit  39.3 
 
 
400 aa  182  1e-44  Methylobacterium sp. 4-46  Bacteria  normal  0.172287  normal  0.0105147 
 
 
-
 
NC_009077  Mjls_2574  acyl-CoA dehydrogenase domain-containing protein  32.99 
 
 
385 aa  182  1e-44  Mycobacterium sp. JLS  Bacteria  normal  0.762648  normal 
 
 
-
 
NC_007925  RPC_2229  acyl-CoA dehydrogenase-like  33.33 
 
 
396 aa  181  2e-44  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.033637  normal  0.0664218 
 
 
-
 
NC_009511  Swit_0317  acyl-CoA dehydrogenase domain-containing protein  34.67 
 
 
386 aa  181  2e-44  Sphingomonas wittichii RW1  Bacteria  normal  0.410084  normal 
 
 
-
 
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