More than 300 homologs were found in PanDaTox collection
for query gene DET0615 on replicon NC_002936
Organism: Dehalococcoides ethenogenes 195



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002936  DET0615  hydrogenase, group 3, VhuA subunit, putative  100 
 
 
479 aa  994    Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_009455  DehaBAV1_0588  F420-non-reducing hydrogenase subunit A  94.99 
 
 
479 aa  955    Dehalococcoides sp. BAV1  Bacteria  hitchhiker  0.0000204108  n/a   
 
 
-
 
NC_013552  DhcVS_553  nickel-dependent hydrogenase, group 3, large subunit  95.62 
 
 
479 aa  960    Dehalococcoides sp. VS  Bacteria  normal  0.0139726  n/a   
 
 
-
 
NC_008554  Sfum_2221  nickel-dependent hydrogenase, large subunit  52.92 
 
 
482 aa  554  1e-156  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.794889  normal  0.78316 
 
 
-
 
NC_008554  Sfum_3954  nickel-dependent hydrogenase, large subunit  59.78 
 
 
449 aa  553  1e-156  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.644029 
 
 
-
 
NC_008554  Sfum_1791  hydrogen dehydrogenase  57.94 
 
 
449 aa  540  9.999999999999999e-153  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_3537  nickel-dependent hydrogenase, large subunit  56.47 
 
 
469 aa  540  9.999999999999999e-153  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_013223  Dret_2258  nickel-dependent hydrogenase large subunit  48.39 
 
 
486 aa  454  1.0000000000000001e-126  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_010424  Daud_1651  nickel-dependent hydrogenase, large subunit  46.09 
 
 
485 aa  424  1e-117  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_009135  MmarC5_0652  F420-non-reducing hydrogenase subunit A  43.63 
 
 
471 aa  416  9.999999999999999e-116  Methanococcus maripaludis C5  Archaea  normal  n/a   
 
 
-
 
NC_009634  Mevan_0070  nickel-dependent hydrogenase large subunit  43.42 
 
 
471 aa  416  9.999999999999999e-116  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_011661  Dtur_0078  nickel-dependent hydrogenase large subunit  43.19 
 
 
474 aa  409  1e-113  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_009135  MmarC5_1712  F420-non-reducing hydrogenase subunit A  47.07 
 
 
418 aa  402  1e-111  Methanococcus maripaludis C5  Archaea  normal  n/a   
 
 
-
 
NC_013385  Adeg_2013  nickel-dependent hydrogenase large subunit  45.44 
 
 
487 aa  404  1e-111  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_2476  nickel-dependent hydrogenase large subunit  44.26 
 
 
473 aa  402  9.999999999999999e-111  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.795621  normal  0.410999 
 
 
-
 
NC_009051  Memar_1007  nickel-dependent hydrogenase, large subunit  44.35 
 
 
455 aa  400  9.999999999999999e-111  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_009637  MmarC7_0969  nickel-dependent hydrogenase large subunit  46.84 
 
 
418 aa  399  9.999999999999999e-111  Methanococcus maripaludis C7  Archaea  normal  normal 
 
 
-
 
NC_009975  MmarC6_0977  nickel-dependent hydrogenase large subunit  46.84 
 
 
418 aa  400  9.999999999999999e-111  Methanococcus maripaludis C6  Archaea  normal  0.390644  n/a   
 
 
-
 
NC_009634  Mevan_0996  nickel-dependent hydrogenase large subunit  46.14 
 
 
418 aa  395  1e-109  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_010571  Oter_3680  nickel-dependent hydrogenase large subunit  43.22 
 
 
509 aa  397  1e-109  Opitutus terrae PB90-1  Bacteria  normal  0.0782936  normal  0.503756 
 
 
-
 
NC_011729  PCC7424_4160  nickel-dependent hydrogenase large subunit  42.65 
 
 
474 aa  390  1e-107  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_013158  Huta_2102  nickel-dependent hydrogenase large subunit  42.8 
 
 
472 aa  385  1e-106  Halorhabdus utahensis DSM 12940  Archaea  normal  0.782605  n/a   
 
 
-
 
NC_011891  A2cp1_4314  nickel-dependent hydrogenase large subunit  40.5 
 
 
494 aa  387  1e-106  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_009635  Maeo_1215  nickel-dependent hydrogenase large subunit  45.43 
 
 
418 aa  387  1e-106  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_011145  AnaeK_4292  nickel-dependent hydrogenase large subunit  40.5 
 
 
494 aa  387  1e-106  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_2716  nickel-dependent hydrogenase, large subunit  42.59 
 
 
479 aa  385  1e-106  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.892044  normal 
 
 
-
 
NC_011726  PCC8801_0095  nickel-dependent hydrogenase large subunit  41.26 
 
 
474 aa  382  1e-105  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_0092  nickel-dependent hydrogenase large subunit  41.26 
 
 
474 aa  382  1e-105  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.643449 
 
 
-
 
NC_009635  Maeo_0097  nickel-dependent hydrogenase large subunit  42.73 
 
 
475 aa  379  1e-104  Methanococcus aeolicus Nankai-3  Archaea  normal  0.325648  n/a   
 
 
-
 
NC_007517  Gmet_1113  nickel-dependent hydrogenase, large subunit  41.58 
 
 
476 aa  380  1e-104  Geobacter metallireducens GS-15  Bacteria  normal  0.301961  normal 
 
 
-
 
NC_011884  Cyan7425_4043  nickel-dependent hydrogenase large subunit  42.86 
 
 
473 aa  380  1e-104  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.0198059 
 
 
-
 
NC_002939  GSU2718  NAD-reducing hydrogenase, beta subunit  41.18 
 
 
478 aa  376  1e-103  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_4162  nickel-dependent hydrogenase, large subunit  40.92 
 
 
494 aa  377  1e-103  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.0906302  n/a   
 
 
-
 
NC_010814  Glov_2791  nickel-dependent hydrogenase large subunit  42.68 
 
 
482 aa  375  1e-103  Geobacter lovleyi SZ  Bacteria  normal  0.119602  n/a   
 
 
-
 
NC_009523  RoseRS_3539  nickel-dependent hydrogenase, large subunit  42.53 
 
 
474 aa  370  1e-101  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009675  Anae109_4306  nickel-dependent hydrogenase large subunit  40.71 
 
 
498 aa  371  1e-101  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.891144  normal  0.552071 
 
 
-
 
NC_007413  Ava_4661  nickel-dependent hydrogenase, large subunit  42.62 
 
 
487 aa  370  1e-101  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_002977  MCA0114  NAD-reducing hydrogenase, beta subunit  41.04 
 
 
494 aa  367  1e-100  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_007614  Nmul_A1673  nickel-dependent hydrogenase, large subunit  38.08 
 
 
493 aa  357  3.9999999999999996e-97  Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.521628  n/a   
 
 
-
 
NC_011662  Tmz1t_2250  nickel-dependent hydrogenase large subunit  38.99 
 
 
488 aa  352  1e-95  Thauera sp. MZ1T  Bacteria  normal  0.0169608  n/a   
 
 
-
 
NC_007604  Synpcc7942_2555  NAD-reducing hydrogenase HoxS beta subunit  38.87 
 
 
476 aa  351  2e-95  Synechococcus elongatus PCC 7942  Bacteria  normal  0.148056  normal 
 
 
-
 
NC_009767  Rcas_1368  nickel-dependent hydrogenase large subunit  42.05 
 
 
475 aa  350  3e-95  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_007973  Rmet_1525  nickel-dependent hydrogenase, large subunit  39.43 
 
 
488 aa  347  2e-94  Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.00000894187  hitchhiker  0.00486844 
 
 
-
 
NC_008709  Ping_1215  nickel-dependent hydrogenase, large subunit  37.79 
 
 
499 aa  348  2e-94  Psychromonas ingrahamii 37  Bacteria  normal  normal  0.0417903 
 
 
-
 
NC_010524  Lcho_1459  nickel-dependent hydrogenase large subunit  38.08 
 
 
504 aa  346  5e-94  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.720227 
 
 
-
 
NC_007517  Gmet_3320  nickel-dependent hydrogenase, large subunit  42.55 
 
 
473 aa  345  8.999999999999999e-94  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_0982  nickel-dependent hydrogenase, large subunit  38.43 
 
 
487 aa  338  9.999999999999999e-92  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_007953  Bxe_C0531  putative nickel-dependent hydrogenase, large subunit  37.18 
 
 
504 aa  338  9.999999999999999e-92  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_3855  nickel-dependent hydrogenase, large subunit  38.2 
 
 
507 aa  336  5.999999999999999e-91  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU2419  nickel-dependent hydrogenase, large subunit  42.55 
 
 
473 aa  330  4e-89  Geobacter sulfurreducens PCA  Bacteria  normal  0.954862  n/a   
 
 
-
 
NC_008726  Mvan_4113  nickel-dependent hydrogenase, large subunit  38.62 
 
 
489 aa  330  5.0000000000000004e-89  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0509028  normal  0.183384 
 
 
-
 
NC_011666  Msil_2748  nickel-dependent hydrogenase large subunit  37.08 
 
 
488 aa  321  1.9999999999999998e-86  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_012918  GM21_3972  nickel-dependent hydrogenase large subunit  39.96 
 
 
473 aa  319  6e-86  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00000529156 
 
 
-
 
NC_011146  Gbem_3884  nickel-dependent hydrogenase large subunit  39.74 
 
 
473 aa  313  3.9999999999999997e-84  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1553  nickel-dependent hydrogenase large subunit  38.41 
 
 
479 aa  312  1e-83  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_013204  Elen_1256  nickel-dependent hydrogenase large subunit  31.29 
 
 
430 aa  189  1e-46  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_010803  Clim_2097  nickel-dependent hydrogenase large subunit  30.36 
 
 
424 aa  184  2.0000000000000003e-45  Chlorobium limicola DSM 245  Bacteria  normal  n/a   
 
 
-
 
NC_008639  Cpha266_2169  nickel-dependent hydrogenase, large subunit  30.35 
 
 
424 aa  181  2.9999999999999997e-44  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_013158  Huta_2605  nickel-dependent hydrogenase large subunit  30.3 
 
 
439 aa  179  9e-44  Halorhabdus utahensis DSM 12940  Archaea  normal  0.0537031  n/a   
 
 
-
 
NC_007514  Cag_0245  hydrogenase/sulfur reductase, alpha subunit  30.33 
 
 
426 aa  175  1.9999999999999998e-42  Chlorobium chlorochromatii CaD3  Bacteria  normal  0.392685  n/a   
 
 
-
 
NC_011060  Ppha_2499  nickel-dependent hydrogenase large subunit  29.61 
 
 
424 aa  173  6.999999999999999e-42  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_011059  Paes_1929  nickel-dependent hydrogenase large subunit  29.44 
 
 
425 aa  170  5e-41  Prosthecochloris aestuarii DSM 271  Bacteria  normal  normal 
 
 
-
 
NC_010831  Cphamn1_2132  nickel-dependent hydrogenase large subunit  28.7 
 
 
425 aa  170  6e-41  Chlorobium phaeobacteroides BS1  Bacteria  normal  0.0448433  normal  0.0283043 
 
 
-
 
NC_013926  Aboo_0080  nickel-dependent hydrogenase large subunit  27.35 
 
 
421 aa  164  3e-39  Aciduliprofundum boonei T469  Archaea  normal  0.303597  n/a   
 
 
-
 
NC_011206  Lferr_1055  nickel-dependent hydrogenase large subunit  28.73 
 
 
432 aa  161  2e-38  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal  0.620596 
 
 
-
 
NC_011761  AFE_0937  [NiFe] hydrogenase, alpha subunit, putative  28.3 
 
 
422 aa  161  2e-38  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.952693  n/a   
 
 
-
 
NC_011884  Cyan7425_2660  Coenzyme F420 hydrogenase  27.81 
 
 
433 aa  157  3e-37  Cyanothece sp. PCC 7425  Bacteria  normal  0.041142  normal 
 
 
-
 
NC_006368  lpp2532  hypothetical protein  29.21 
 
 
430 aa  157  5.0000000000000005e-37  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_006369  lpl2387  hypothetical protein  28.66 
 
 
430 aa  156  7e-37  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_011901  Tgr7_1138  nickel-dependent hydrogenase large subunit  27.99 
 
 
431 aa  152  1e-35  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_4496  nickel-dependent hydrogenase, large subunit  28.72 
 
 
430 aa  150  4e-35  Frankia sp. CcI3  Bacteria  normal  0.401222  normal 
 
 
-
 
NC_013501  Rmar_2590  nickel-dependent hydrogenase large subunit  28.51 
 
 
433 aa  150  7e-35  Rhodothermus marinus DSM 4252  Bacteria  normal  0.282401  n/a   
 
 
-
 
NC_010581  Bind_0507  nickel-dependent hydrogenase large subunit  27.1 
 
 
429 aa  142  9.999999999999999e-33  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_008578  Acel_1019  nickel-dependent hydrogenase, large subunit  26.96 
 
 
431 aa  142  9.999999999999999e-33  Acidothermus cellulolyticus 11B  Bacteria  normal  hitchhiker  0.00653003 
 
 
-
 
NC_007404  Tbd_1263  hypothetical protein  27.77 
 
 
433 aa  141  1.9999999999999998e-32  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.321319  normal 
 
 
-
 
NC_009483  Gura_1122  nickel-dependent hydrogenase, large subunit  28.32 
 
 
425 aa  141  3e-32  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009135  MmarC5_0649  coenzyme F420-reducing hydrogenase, alpha subunit  26.51 
 
 
410 aa  138  2e-31  Methanococcus maripaludis C5  Archaea  normal  n/a   
 
 
-
 
NC_013385  Adeg_1787  nickel-dependent hydrogenase large subunit  26.58 
 
 
481 aa  138  2e-31  Ammonifex degensii KC4  Bacteria  normal  0.993845  n/a   
 
 
-
 
NC_013173  Dbac_1969  nickel-dependent hydrogenase large subunit  27.78 
 
 
514 aa  138  3.0000000000000003e-31  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.668451  n/a   
 
 
-
 
NC_013595  Sros_4826  nickel-dependent hydrogenase large subunit  27.39 
 
 
428 aa  137  5e-31  Streptosporangium roseum DSM 43021  Bacteria  normal  0.106762  normal 
 
 
-
 
NC_007355  Mbar_A0452  coenzyme F420-reducing hydrogenase, alpha subunit  26.4 
 
 
456 aa  136  9.999999999999999e-31  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_008942  Mlab_0015  coenzyme F420-reducing hydrogenase, alpha subunit  25.68 
 
 
455 aa  136  9.999999999999999e-31  Methanocorpusculum labreanum Z  Archaea  normal  normal 
 
 
-
 
NC_013947  Snas_3474  nickel-dependent hydrogenase large subunit  27.56 
 
 
432 aa  135  1.9999999999999998e-30  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.455292  normal 
 
 
-
 
NC_009634  Mevan_0073  nickel-dependent hydrogenase large subunit  26.74 
 
 
410 aa  134  3.9999999999999996e-30  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_010424  Daud_1042  nickel-dependent hydrogenase, large subunit  26.49 
 
 
485 aa  134  5e-30  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.90765  n/a   
 
 
-
 
NC_008751  Dvul_1248  nickel-dependent hydrogenase, large subunit  27.95 
 
 
488 aa  132  1.0000000000000001e-29  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.210122 
 
 
-
 
NC_008146  Mmcs_3416  nickel-dependent hydrogenase, large subunit  26.82 
 
 
430 aa  131  2.0000000000000002e-29  Mycobacterium sp. MCS  Bacteria  normal  0.291194  n/a   
 
 
-
 
NC_008705  Mkms_3479  nickel-dependent hydrogenase, large subunit  26.82 
 
 
430 aa  131  2.0000000000000002e-29  Mycobacterium sp. KMS  Bacteria  normal  0.441341  normal  0.0523033 
 
 
-
 
NC_012560  Avin_04400  Soluble nickel-dependent hydrogenase, large subunit, HoxH  26.78 
 
 
419 aa  131  3e-29  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_3427  nickel-dependent hydrogenase, large subunit  26.82 
 
 
430 aa  131  3e-29  Mycobacterium sp. JLS  Bacteria  normal  normal  0.260108 
 
 
-
 
NC_013385  Adeg_1231  nickel-dependent hydrogenase large subunit  25.99 
 
 
458 aa  129  1.0000000000000001e-28  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_1858  nickel-dependent hydrogenase large subunit  26.24 
 
 
428 aa  127  4.0000000000000003e-28  Thermobispora bispora DSM 43833  Bacteria  normal  0.940457  normal 
 
 
-
 
NC_011769  DvMF_0273  nickel-dependent hydrogenase large subunit  27.2 
 
 
488 aa  127  4.0000000000000003e-28  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.328721 
 
 
-
 
NC_008576  Mmc1_0884  nickel-dependent hydrogenase, large subunit  25.64 
 
 
432 aa  127  5e-28  Magnetococcus sp. MC-1  Bacteria  normal  0.912975  normal  0.251676 
 
 
-
 
NC_011146  Gbem_1968  nickel-dependent hydrogenase large subunit  28.17 
 
 
423 aa  125  1e-27  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009051  Memar_2174  nickel-dependent hydrogenase, large subunit  25.42 
 
 
455 aa  125  1e-27  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_007355  Mbar_A2287  coenzyme F420 hydrogenase, subunit alpha  25.27 
 
 
456 aa  124  3e-27  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal  0.304616 
 
 
-
 
NC_002936  DET0110  [Ni/Fe] hydrogenase, group 1, large subunit, putative  27.1 
 
 
526 aa  123  7e-27  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2249  nickel-dependent hydrogenase large subunit  27.23 
 
 
423 aa  122  9.999999999999999e-27  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007796  Mhun_2332  nickel-dependent hydrogenase, large subunit  25.94 
 
 
469 aa  122  9.999999999999999e-27  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
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