187 homologs were found in PanDaTox collection
for query gene Cyan7425_2869 on replicon NC_011884
Organism: Cyanothece sp. PCC 7425



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011884  Cyan7425_2869  putative transcriptional regulator, Crp/Fnr family  100 
 
 
211 aa  428  1e-119  Cyanothece sp. PCC 7425  Bacteria  decreased coverage  0.00060408  normal  0.537416 
 
 
-
 
NC_007413  Ava_0463  Crp/FNR family transcriptional regulator  44.38 
 
 
197 aa  152  2e-36  Anabaena variabilis ATCC 29413  Bacteria  normal  0.778777  normal  0.174596 
 
 
-
 
NC_014248  Aazo_0990  putative Crp/Fnr family transcriptional regulator  42.11 
 
 
195 aa  141  8e-33  'Nostoc azollae' 0708  Bacteria  normal  0.596823  n/a   
 
 
-
 
NC_007413  Ava_3366  Crp/FNR family transcriptional regulator  43.79 
 
 
208 aa  140  1.9999999999999998e-32  Anabaena variabilis ATCC 29413  Bacteria  normal  0.698764  normal  0.804601 
 
 
-
 
NC_007604  Synpcc7942_2174  CRP/FNR family transcriptional regulator  38.62 
 
 
209 aa  116  3e-25  Synechococcus elongatus PCC 7942  Bacteria  normal  normal  0.576133 
 
 
-
 
NC_007604  Synpcc7942_1684  CRP/FNR family transcriptional regulator  40.12 
 
 
206 aa  115  3.9999999999999997e-25  Synechococcus elongatus PCC 7942  Bacteria  normal  0.24693  normal  0.330754 
 
 
-
 
NC_008312  Tery_1663  CRP/FNR family transcriptional regulator  35.76 
 
 
179 aa  93.2  2e-18  Trichodesmium erythraeum IMS101  Bacteria  normal  0.231367  normal 
 
 
-
 
NC_007413  Ava_2491  Crp/FNR family transcriptional regulator  28.85 
 
 
393 aa  74.7  0.0000000000008  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.116073 
 
 
-
 
NC_014248  Aazo_2484  putative Crp/Fnr family transcriptional regulator  30 
 
 
389 aa  74.3  0.000000000001  'Nostoc azollae' 0708  Bacteria  normal  0.399715  n/a   
 
 
-
 
NC_007516  Syncc9605_1146  CRP/FNR family transcriptional regulator  28.29 
 
 
211 aa  70.9  0.00000000002  Synechococcus sp. CC9605  Bacteria  normal  0.242619  normal 
 
 
-
 
NC_011884  Cyan7425_0207  transcriptional regulator, Crp/Fnr family  30.05 
 
 
218 aa  67.8  0.0000000001  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.163925 
 
 
-
 
NC_011729  PCC7424_0437  putative transcriptional regulator, Crp/Fnr family with PAS/PAC sensor  30.91 
 
 
405 aa  67  0.0000000002  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_007604  Synpcc7942_2356  Crp/FNR family transcriptional regulator  31.33 
 
 
208 aa  65.5  0.0000000006  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_008312  Tery_2023  Crp/FNR family transcriptional regulator  27.32 
 
 
221 aa  61.6  0.000000007  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.0496812 
 
 
-
 
NC_009972  Haur_1291  CRP/FNR family transcriptional regulator  27.98 
 
 
305 aa  60.5  0.00000002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.06322  n/a   
 
 
-
 
NC_011729  PCC7424_3970  putative transcriptional regulator, Crp/Fnr family  32.52 
 
 
199 aa  59.3  0.00000004  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_009012  Cthe_2775  Crp/FNR family transcriptional regulator  20.85 
 
 
232 aa  58.5  0.00000006  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.9012  n/a   
 
 
-
 
NC_007513  Syncc9902_2075  Crp/FNR family transcriptional regulator  28.41 
 
 
210 aa  57.4  0.0000001  Synechococcus sp. CC9902  Bacteria  normal  n/a   
 
 
-
 
NC_013161  Cyan8802_0353  putative transcriptional regulator, Crp/Fnr family  30.17 
 
 
200 aa  57.4  0.0000002  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_0346  putative transcriptional regulator, Crp/Fnr family  30.17 
 
 
200 aa  57.4  0.0000002  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_010424  Daud_0783  CRP/FNR family transcriptional regulator  26.26 
 
 
217 aa  56.2  0.0000003  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_5030  transcriptional regulator, Crp/Fnr family  21.29 
 
 
238 aa  56.6  0.0000003  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_3926  transcriptional regulator, Crp/Fnr family  21.29 
 
 
238 aa  56.6  0.0000003  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_008820  P9303_11071  putative transcriptional regulator, Crp/Fnr family protein  20.9 
 
 
233 aa  55.5  0.0000006  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal 
 
 
-
 
NC_011899  Hore_05940  putative transcriptional regulator, Crp/Fnr family  27.91 
 
 
231 aa  55.5  0.0000006  Halothermothrix orenii H 168  Bacteria  normal  0.558941  n/a   
 
 
-
 
NC_007516  Syncc9605_0269  Crp/FNR family transcriptional regulator  27.84 
 
 
238 aa  55.1  0.0000007  Synechococcus sp. CC9605  Bacteria  normal  normal 
 
 
-
 
NC_007964  Nham_1951  transcriptional regulator FixK  28.99 
 
 
231 aa  55.1  0.0000007  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_008820  P9303_24561  CRP family global nitrogen regulatory protein  27.27 
 
 
222 aa  55.1  0.0000008  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal 
 
 
-
 
NC_013161  Cyan8802_2082  transcriptional regulator, Crp/Fnr family  26.14 
 
 
225 aa  53.5  0.000002  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_007335  PMN2A_1612  Crp/FNR family transcriptional regulator  27.61 
 
 
243 aa  53.5  0.000002  Prochlorococcus marinus str. NATL2A  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_3283  Crp/FNR family transcriptional regulator  25.26 
 
 
223 aa  53.9  0.000002  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_0750  Crp/FNR family transcriptional regulator  23.72 
 
 
238 aa  53.5  0.000002  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_008817  P9515_02791  CRP family global nitrogen regulatory protein  28.57 
 
 
244 aa  53.5  0.000002  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  0.696842  n/a   
 
 
-
 
NC_008819  NATL1_03241  CRP family global nitrogen regulatory protein  27.61 
 
 
243 aa  53.5  0.000002  Prochlorococcus marinus str. NATL1A  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_2058  transcriptional regulator, Crp/Fnr family  26.14 
 
 
225 aa  53.5  0.000002  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_011884  Cyan7425_0755  transcriptional regulator, Crp/Fnr family  25 
 
 
223 aa  52.8  0.000003  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.125698 
 
 
-
 
NC_014248  Aazo_1065  Crp/Fnr family transcriptional regulator  24.74 
 
 
223 aa  53.5  0.000003  'Nostoc azollae' 0708  Bacteria  normal  0.547512  n/a   
 
 
-
 
NC_011729  PCC7424_0372  transcriptional regulator, Crp/Fnr family  34.07 
 
 
225 aa  52.8  0.000004  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_010511  M446_0946  Crp/FNR family transcriptional regulator  22.09 
 
 
253 aa  52.8  0.000004  Methylobacterium sp. 4-46  Bacteria  normal  0.336903  normal 
 
 
-
 
NC_010320  Teth514_1376  CRP/FNR family transcriptional regulator  23.16 
 
 
228 aa  52.8  0.000004  Thermoanaerobacter sp. X514  Bacteria  normal  0.271211  n/a   
 
 
-
 
NC_009091  P9301_02691  CRP family global nitrogen regulatory protein  28.57 
 
 
244 aa  51.6  0.000008  Prochlorococcus marinus str. MIT 9301  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_2444  Crp/FNR family transcriptional regulator  23.77 
 
 
238 aa  51.6  0.000009  Pelobacter propionicus DSM 2379  Bacteria  decreased coverage  0.000577484  n/a   
 
 
-
 
NC_007335  PMN2A_0435  regulatory protein, Crp  24.81 
 
 
210 aa  50.8  0.00001  Prochlorococcus marinus str. NATL2A  Bacteria  normal  0.0427117  n/a   
 
 
-
 
NC_007577  PMT9312_0248  Crp/FNR family transcriptional regulator  28.57 
 
 
244 aa  51.2  0.00001  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  n/a   
 
 
-
 
NC_008816  A9601_02681  CRP family global nitrogen regulatory protein  28.57 
 
 
244 aa  51.2  0.00001  Prochlorococcus marinus str. AS9601  Bacteria  normal  0.548193  n/a   
 
 
-
 
NC_008819  NATL1_11461  CRP/FNR family transcriptional regulator  24.81 
 
 
210 aa  51.2  0.00001  Prochlorococcus marinus str. NATL1A  Bacteria  normal  hitchhiker  0.00962041 
 
 
-
 
NC_011138  MADE_02063  transcriptional regulator of aerobic, anaerobic respiration, osmotic balance (CAMP-binding family) protein  21.36 
 
 
222 aa  51.2  0.00001  Alteromonas macleodii 'Deep ecotype'  Bacteria  hitchhiker  0.00714534  n/a   
 
 
-
 
NC_010159  YpAngola_A2293  fumarate/nitrate reduction transcriptional regulator  25.37 
 
 
250 aa  50.8  0.00002  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_008261  CPF_0778  Crp/FNR family transcriptional regulator  20.91 
 
 
236 aa  50.4  0.00002  Clostridium perfringens ATCC 13124  Bacteria  hitchhiker  0.000312841  n/a   
 
 
-
 
NC_010465  YPK_1944  fumarate/nitrate reduction transcriptional regulator  24.5 
 
 
250 aa  50.4  0.00002  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.755264  n/a   
 
 
-
 
NC_008262  CPR_0754  Crp/FNR family transcriptional regulator  21.03 
 
 
236 aa  50.1  0.00002  Clostridium perfringens SM101  Bacteria  decreased coverage  0.0000212493  n/a   
 
 
-
 
NC_009708  YpsIP31758_1833  fumarate/nitrate reduction transcriptional regulator  24.5 
 
 
250 aa  50.4  0.00002  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_0115  putative transcriptional regulator, Crp/Fnr family  35.82 
 
 
225 aa  50.1  0.00002  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.2299 
 
 
-
 
NC_010725  Mpop_3889  transcriptional regulator, Crp/Fnr family  23.39 
 
 
229 aa  49.7  0.00003  Methylobacterium populi BJ001  Bacteria  normal  normal  0.128439 
 
 
-
 
NC_007958  RPD_1340  transcriptional regulator FixK  25.44 
 
 
229 aa  49.7  0.00003  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.324269  normal 
 
 
-
 
NC_009523  RoseRS_0595  CRP/FNR family transcriptional regulator  27.37 
 
 
228 aa  49.7  0.00003  Roseiflexus sp. RS-1  Bacteria  normal  0.130469  unclonable  0.00000708114 
 
 
-
 
NC_009674  Bcer98_3398  CRP/FNR family transcriptional regulator  26.59 
 
 
230 aa  50.1  0.00003  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_2222  fumarate/nitrate reduction transcriptional regulator  22.63 
 
 
250 aa  49.7  0.00003  Shewanella pealeana ATCC 700345  Bacteria  normal  0.0665535  n/a   
 
 
-
 
NC_005957  BT9727_1958  Crp/FNR family transcriptional regulator  27.03 
 
 
230 aa  49.3  0.00004  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0304498  n/a   
 
 
-
 
NC_006274  BCZK1936  Crp/FNR family transcriptional regulator  27.03 
 
 
230 aa  49.3  0.00004  Bacillus cereus E33L  Bacteria  normal  0.308171  n/a   
 
 
-
 
NC_011773  BCAH820_2165  transcriptional regulator, Crp/Fnr family  27.03 
 
 
230 aa  49.3  0.00004  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_011004  Rpal_4729  transcriptional regulator FixK  25.75 
 
 
230 aa  49.3  0.00004  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS1984  Crp/FNR family transcriptional regulator  27.17 
 
 
230 aa  49.3  0.00005  Bacillus anthracis str. Sterne  Bacteria  normal  0.513682  n/a   
 
 
-
 
NC_007530  GBAA_2132  Crp/FNR family transcriptional regulator  27.17 
 
 
226 aa  48.9  0.00005  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B3176  transcriptional regulator, Crp/Fnr family  27.03 
 
 
230 aa  48.9  0.00005  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_0860  Crp/FNR family transcriptional regulator  27.06 
 
 
234 aa  48.5  0.00006  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.693979  n/a   
 
 
-
 
NC_011658  BCAH187_A2279  transcriptional regulator, Crp/Fnr family  27.03 
 
 
230 aa  48.9  0.00006  Bacillus cereus AH187  Bacteria  normal  0.216294  n/a   
 
 
-
 
NC_011773  BCAH820_0411  transcriptional regulator, Crp family  25.79 
 
 
229 aa  48.9  0.00006  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.000553573 
 
 
-
 
NC_009253  Dred_3227  CRP/FNR family transcriptional regulator  29.21 
 
 
232 aa  48.9  0.00006  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_2582  fumarate/nitrate reduction transcriptional regulator  25.12 
 
 
254 aa  48.9  0.00006  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_005957  BT9727_0345  Crp family transcriptional regulator  27.01 
 
 
229 aa  48.5  0.00007  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.254354  n/a   
 
 
-
 
NC_013411  GYMC61_1592  transcriptional regulator, Crp/Fnr family  30.64 
 
 
228 aa  48.5  0.00007  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009485  BBta_2786  transcriptional regulator FixK  25.44 
 
 
229 aa  48.5  0.00007  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0460697  normal  0.11454 
 
 
-
 
CP001637  EcDH1_2311  transcriptional regulator, Crp/Fnr family  24.73 
 
 
250 aa  48.5  0.00008  Escherichia coli DH1  Bacteria  normal  0.144598  n/a   
 
 
-
 
NC_011080  SNSL254_A1783  fumarate/nitrate reduction transcriptional regulator  24.73 
 
 
250 aa  48.5  0.00008  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal  0.251439 
 
 
-
 
NC_007604  Synpcc7942_0127  Crp/FNR family transcriptional regulator  32.97 
 
 
222 aa  48.5  0.00008  Synechococcus elongatus PCC 7942  Bacteria  normal  0.867755  normal  0.325855 
 
 
-
 
NC_010498  EcSMS35_1788  fumarate/nitrate reduction transcriptional regulator  24.73 
 
 
250 aa  48.5  0.00008  Escherichia coli SMS-3-5  Bacteria  normal  0.765276  normal 
 
 
-
 
NC_011149  SeAg_B1491  fumarate/nitrate reduction transcriptional regulator  24.73 
 
 
250 aa  48.5  0.00008  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.0202312  n/a   
 
 
-
 
NC_011205  SeD_A1673  fumarate/nitrate reduction transcriptional regulator  24.73 
 
 
250 aa  48.5  0.00008  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.349784  normal  0.0983377 
 
 
-
 
NC_011083  SeHA_C1845  fumarate/nitrate reduction transcriptional regulator  24.73 
 
 
250 aa  48.5  0.00008  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.918423  normal 
 
 
-
 
NC_010658  SbBS512_E1575  fumarate/nitrate reduction transcriptional regulator  24.73 
 
 
250 aa  48.5  0.00008  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_008312  Tery_1557  Crp/FNR family transcriptional regulator  26.8 
 
 
234 aa  48.5  0.00008  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.986178 
 
 
-
 
NC_011725  BCB4264_A2139  transcriptional regulator, Crp/Fnr family  27.03 
 
 
230 aa  48.1  0.00008  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_2291  fumarate/nitrate reduction transcriptional regulator  24.73 
 
 
250 aa  48.5  0.00008  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_011094  SeSA_A1785  fumarate/nitrate reduction transcriptional regulator  24.73 
 
 
250 aa  48.5  0.00008  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.377507  normal  0.141635 
 
 
-
 
NC_011353  ECH74115_1981  fumarate/nitrate reduction transcriptional regulator  24.73 
 
 
250 aa  48.5  0.00008  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal  0.320226 
 
 
-
 
NC_009800  EcHS_A1450  fumarate/nitrate reduction transcriptional regulator  24.73 
 
 
250 aa  48.5  0.00008  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_1546  fumarate/nitrate reduction transcriptional regulator  24.73 
 
 
250 aa  48.5  0.00008  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_1361  transcriptional regulator FixK  25.44 
 
 
229 aa  48.1  0.00009  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0646149  normal 
 
 
-
 
NC_008345  Sfri_2018  fumarate/nitrate reduction transcriptional regulator  20.53 
 
 
252 aa  48.1  0.00009  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.831368  n/a   
 
 
-
 
NC_011887  Mnod_8112  transcriptional regulator, Crp/Fnr family  22.83 
 
 
229 aa  48.1  0.00009  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_002936  DET0299  Crp/FNR family transcriptional regulator  20.81 
 
 
247 aa  47.8  0.0001  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_1047  cyclic nucleotide-binding: regulatory protein, Crp  25.81 
 
 
247 aa  47.4  0.0001  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_1167  transcriptional regulator, Crp/Fnr family  19.91 
 
 
239 aa  47.8  0.0001  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.0000625437  n/a   
 
 
-
 
NC_013440  Hoch_2081  transcriptional regulator, Crp/Fnr family  24.4 
 
 
229 aa  48.1  0.0001  Haliangium ochraceum DSM 14365  Bacteria  normal  0.264181  normal 
 
 
-
 
NC_008817  P9515_07751  Crp family regulatory proteins  27.21 
 
 
195 aa  47.8  0.0001  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_2417  fumarate/nitrate reduction transcriptional regulator  21.05 
 
 
249 aa  47.4  0.0001  Shewanella woodyi ATCC 51908  Bacteria  normal  0.0646393  decreased coverage  0.000000159166 
 
 
-
 
NC_009767  Rcas_3897  Crp/FNR family transcriptional regulator  26.35 
 
 
227 aa  47.8  0.0001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.280734  normal  0.887061 
 
 
-
 
NC_009953  Sare_0070  cyclic nucleotide-binding protein  23.59 
 
 
227 aa  47.4  0.0001  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.376283 
 
 
-
 
NC_007406  Nwi_1036  transcriptional regulator FixK  25.61 
 
 
231 aa  47.4  0.0002  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
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