288 homologs were found in PanDaTox collection
for query gene Cyan7425_0207 on replicon NC_011884
Organism: Cyanothece sp. PCC 7425



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011884  Cyan7425_0207  transcriptional regulator, Crp/Fnr family  100 
 
 
218 aa  445  1.0000000000000001e-124  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.163925 
 
 
-
 
NC_007604  Synpcc7942_2356  Crp/FNR family transcriptional regulator  45.85 
 
 
208 aa  186  3e-46  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_0346  putative transcriptional regulator, Crp/Fnr family  53.55 
 
 
200 aa  182  4.0000000000000006e-45  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_0353  putative transcriptional regulator, Crp/Fnr family  54.1 
 
 
200 aa  182  4.0000000000000006e-45  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_007516  Syncc9605_1146  CRP/FNR family transcriptional regulator  44.51 
 
 
211 aa  164  6.9999999999999995e-40  Synechococcus sp. CC9605  Bacteria  normal  0.242619  normal 
 
 
-
 
NC_011729  PCC7424_3970  putative transcriptional regulator, Crp/Fnr family  48.66 
 
 
199 aa  159  4e-38  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_007413  Ava_2491  Crp/FNR family transcriptional regulator  40.1 
 
 
393 aa  159  5e-38  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.116073 
 
 
-
 
NC_014248  Aazo_2484  putative Crp/Fnr family transcriptional regulator  39.33 
 
 
389 aa  139  3e-32  'Nostoc azollae' 0708  Bacteria  normal  0.399715  n/a   
 
 
-
 
NC_011729  PCC7424_0437  putative transcriptional regulator, Crp/Fnr family with PAS/PAC sensor  38.42 
 
 
405 aa  132  3e-30  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_011729  PCC7424_0372  transcriptional regulator, Crp/Fnr family  35.57 
 
 
225 aa  117  9e-26  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_008819  NATL1_11461  CRP/FNR family transcriptional regulator  33.68 
 
 
210 aa  114  7.999999999999999e-25  Prochlorococcus marinus str. NATL1A  Bacteria  normal  hitchhiker  0.00962041 
 
 
-
 
NC_007335  PMN2A_0435  regulatory protein, Crp  33.68 
 
 
210 aa  112  5e-24  Prochlorococcus marinus str. NATL2A  Bacteria  normal  0.0427117  n/a   
 
 
-
 
NC_011726  PCC8801_2058  transcriptional regulator, Crp/Fnr family  34.54 
 
 
225 aa  112  6e-24  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_2082  transcriptional regulator, Crp/Fnr family  34.54 
 
 
225 aa  112  6e-24  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_008312  Tery_2023  Crp/FNR family transcriptional regulator  34.9 
 
 
221 aa  112  6e-24  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.0496812 
 
 
-
 
NC_014248  Aazo_1065  Crp/Fnr family transcriptional regulator  34.24 
 
 
223 aa  110  2.0000000000000002e-23  'Nostoc azollae' 0708  Bacteria  normal  0.547512  n/a   
 
 
-
 
NC_007413  Ava_3283  Crp/FNR family transcriptional regulator  34.24 
 
 
223 aa  110  2.0000000000000002e-23  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_007604  Synpcc7942_0127  Crp/FNR family transcriptional regulator  34.62 
 
 
222 aa  110  2.0000000000000002e-23  Synechococcus elongatus PCC 7942  Bacteria  normal  0.867755  normal  0.325855 
 
 
-
 
NC_011884  Cyan7425_0755  transcriptional regulator, Crp/Fnr family  34.55 
 
 
223 aa  109  3e-23  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.125698 
 
 
-
 
NC_008820  P9303_11071  putative transcriptional regulator, Crp/Fnr family protein  29.19 
 
 
233 aa  103  1e-21  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal 
 
 
-
 
NC_008820  P9303_24561  CRP family global nitrogen regulatory protein  32.72 
 
 
222 aa  100  1e-20  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal 
 
 
-
 
NC_007513  Syncc9902_2075  Crp/FNR family transcriptional regulator  34.91 
 
 
210 aa  99.8  3e-20  Synechococcus sp. CC9902  Bacteria  normal  n/a   
 
 
-
 
NC_007516  Syncc9605_0269  Crp/FNR family transcriptional regulator  34.32 
 
 
238 aa  98.6  6e-20  Synechococcus sp. CC9605  Bacteria  normal  normal 
 
 
-
 
NC_008819  NATL1_03241  CRP family global nitrogen regulatory protein  31.75 
 
 
243 aa  94.7  1e-18  Prochlorococcus marinus str. NATL1A  Bacteria  normal  normal 
 
 
-
 
NC_007335  PMN2A_1612  Crp/FNR family transcriptional regulator  31.75 
 
 
243 aa  94.7  1e-18  Prochlorococcus marinus str. NATL2A  Bacteria  normal  n/a   
 
 
-
 
NC_009091  P9301_02691  CRP family global nitrogen regulatory protein  31.95 
 
 
244 aa  91.3  1e-17  Prochlorococcus marinus str. MIT 9301  Bacteria  normal  n/a   
 
 
-
 
NC_008817  P9515_02791  CRP family global nitrogen regulatory protein  31.36 
 
 
244 aa  90.1  2e-17  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  0.696842  n/a   
 
 
-
 
NC_007577  PMT9312_0248  Crp/FNR family transcriptional regulator  30.77 
 
 
244 aa  90.1  3e-17  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  n/a   
 
 
-
 
NC_007604  Synpcc7942_1684  CRP/FNR family transcriptional regulator  35.84 
 
 
206 aa  89.7  3e-17  Synechococcus elongatus PCC 7942  Bacteria  normal  0.24693  normal  0.330754 
 
 
-
 
NC_008816  A9601_02681  CRP family global nitrogen regulatory protein  31.36 
 
 
244 aa  89.7  3e-17  Prochlorococcus marinus str. AS9601  Bacteria  normal  0.548193  n/a   
 
 
-
 
NC_009972  Haur_1291  CRP/FNR family transcriptional regulator  34.2 
 
 
305 aa  87  2e-16  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.06322  n/a   
 
 
-
 
NC_011729  PCC7424_0115  putative transcriptional regulator, Crp/Fnr family  32.99 
 
 
225 aa  86.7  2e-16  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.2299 
 
 
-
 
NC_014248  Aazo_0990  putative Crp/Fnr family transcriptional regulator  33.99 
 
 
195 aa  80.1  0.00000000000002  'Nostoc azollae' 0708  Bacteria  normal  0.596823  n/a   
 
 
-
 
NC_009976  P9211_02711  global nitrogen regulatory protein  33.73 
 
 
244 aa  77.8  0.0000000000001  Prochlorococcus marinus str. MIT 9211  Bacteria  normal  normal 
 
 
-
 
NC_008025  Dgeo_0106  Crp/FNR family transcriptional regulator  31.98 
 
 
254 aa  77  0.0000000000002  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_008312  Tery_3616  CRP/FNR family transcriptional regulator  36.31 
 
 
256 aa  76.6  0.0000000000003  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.0729234 
 
 
-
 
NC_009972  Haur_2113  CRP/FNR family transcriptional regulator  30 
 
 
313 aa  76.6  0.0000000000003  Herpetosiphon aurantiacus ATCC 23779  Bacteria  unclonable  0.000000556838  n/a   
 
 
-
 
NC_007413  Ava_0463  Crp/FNR family transcriptional regulator  30.36 
 
 
197 aa  75.9  0.0000000000004  Anabaena variabilis ATCC 29413  Bacteria  normal  0.778777  normal  0.174596 
 
 
-
 
NC_013595  Sros_0468  putative transcriptional regulator, Crp/Fnr family  30.86 
 
 
226 aa  75.5  0.0000000000006  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.974187 
 
 
-
 
NC_011884  Cyan7425_2869  putative transcriptional regulator, Crp/Fnr family  30.05 
 
 
211 aa  73.2  0.000000000003  Cyanothece sp. PCC 7425  Bacteria  decreased coverage  0.00060408  normal  0.537416 
 
 
-
 
NC_012669  Bcav_0608  transcriptional regulator, Crp/Fnr family  30.21 
 
 
225 aa  71.6  0.000000000009  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.847542  normal 
 
 
-
 
NC_007604  Synpcc7942_2174  CRP/FNR family transcriptional regulator  32.39 
 
 
209 aa  70.9  0.00000000001  Synechococcus elongatus PCC 7942  Bacteria  normal  normal  0.576133 
 
 
-
 
NC_008554  Sfum_2941  Crp/FNR family transcriptional regulator  28.49 
 
 
235 aa  71.2  0.00000000001  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_0204  Crp/Fnr family transcriptional regulator  30.11 
 
 
226 aa  71.2  0.00000000001  Thermobispora bispora DSM 43833  Bacteria  normal  0.0718939  normal 
 
 
-
 
NC_007413  Ava_3366  Crp/FNR family transcriptional regulator  27.88 
 
 
208 aa  70.5  0.00000000002  Anabaena variabilis ATCC 29413  Bacteria  normal  0.698764  normal  0.804601 
 
 
-
 
NC_010320  Teth514_2386  CRP/FNR family transcriptional regulator  27.72 
 
 
225 aa  70.9  0.00000000002  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_18160  putative transcriptional regulator, Crp/Fnr family  26.49 
 
 
219 aa  70.5  0.00000000002  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.000000607267  n/a   
 
 
-
 
NC_011830  Dhaf_3071  transcriptional regulator, Crp/Fnr family  30.96 
 
 
224 aa  69.7  0.00000000003  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00222127  n/a   
 
 
-
 
NC_009664  Krad_0424  putative transcriptional regulator, Crp/Fnr family  28.25 
 
 
242 aa  69.3  0.00000000004  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.24952 
 
 
-
 
NC_013530  Xcel_3038  transcriptional regulator, Crp/Fnr family  27.33 
 
 
225 aa  68.9  0.00000000005  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_1995  transcriptional regulator  27.53 
 
 
224 aa  68.6  0.00000000006  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_4621  transcriptional regulator, Crp/Fnr family  26.42 
 
 
236 aa  68.2  0.00000000009  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_3945  Crp/FNR family transcriptional regulator  28.49 
 
 
240 aa  68.2  0.00000000009  Rhodopseudomonas palustris BisB18  Bacteria  decreased coverage  0.0000374248  normal 
 
 
-
 
NC_009049  Rsph17029_1972  CRP/FNR family transcriptional regulator  26.44 
 
 
233 aa  68.2  0.0000000001  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_1750  Crp/FNR family transcriptional regulator  31.48 
 
 
239 aa  67.8  0.0000000001  Anabaena variabilis ATCC 29413  Bacteria  normal  0.499959  normal 
 
 
-
 
NC_007493  RSP_0327  Crp/FNR family transcriptional regulator  26.44 
 
 
233 aa  68.2  0.0000000001  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.539351  n/a   
 
 
-
 
NC_009428  Rsph17025_0968  CRP/FNR family transcriptional regulator  25.37 
 
 
233 aa  68.2  0.0000000001  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_014248  Aazo_0140  putative Crp/Fnr family transcriptional regulator  31.48 
 
 
239 aa  67.4  0.0000000002  'Nostoc azollae' 0708  Bacteria  normal  0.0938698  n/a   
 
 
-
 
NC_013510  Tcur_4850  transcriptional regulator, Crp/Fnr family  28 
 
 
228 aa  66.2  0.0000000003  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_1944  transcriptional regulator, Crp/Fnr family  26.59 
 
 
227 aa  66.2  0.0000000003  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_008312  Tery_4941  CRP/FNR family transcriptional regulator  68.89 
 
 
45 aa  65.9  0.0000000004  Trichodesmium erythraeum IMS101  Bacteria  normal  normal 
 
 
-
 
NC_002936  DET0299  Crp/FNR family transcriptional regulator  24.86 
 
 
247 aa  65.9  0.0000000005  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_0698  CRP/FNR family transcriptional regulator  28.18 
 
 
227 aa  65.9  0.0000000005  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_1444  Crp/Fnr family transcriptional regulator  27.87 
 
 
236 aa  65.9  0.0000000005  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.920255  normal 
 
 
-
 
NC_013174  Jden_0435  transcriptional regulator, Crp/Fnr family  29.48 
 
 
226 aa  65.5  0.0000000007  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.376669 
 
 
-
 
NC_009253  Dred_3232  cyclic nucleotide-binding protein  31.43 
 
 
212 aa  64.3  0.000000001  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_1853  transcriptional regulator, Crp/Fnr family  25.53 
 
 
240 aa  64.3  0.000000001  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_0253  transcriptional regulator, Crp/Fnr family  28.57 
 
 
224 aa  64.7  0.000000001  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_0517  transcriptional regulator, Crp/Fnr family  27.22 
 
 
224 aa  64.3  0.000000001  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_0860  Crp/FNR family transcriptional regulator  24.86 
 
 
234 aa  63.2  0.000000003  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.693979  n/a   
 
 
-
 
NC_013235  Namu_0718  transcriptional regulator, Crp/Fnr family  29.53 
 
 
224 aa  63.2  0.000000003  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_3029  CRP/FNR family transcriptional regulator  25.7 
 
 
228 aa  63.5  0.000000003  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_3176  transcriptional regulator, Crp/Fnr family  25.86 
 
 
225 aa  62.8  0.000000004  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.231761 
 
 
-
 
NC_008541  Arth_3395  Crp/FNR family transcriptional regulator  25.84 
 
 
225 aa  62.8  0.000000004  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_014211  Ndas_5315  transcriptional regulator, Crp/Fnr family  26.55 
 
 
228 aa  62.4  0.000000005  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.527594 
 
 
-
 
NC_011899  Hore_05940  putative transcriptional regulator, Crp/Fnr family  25.52 
 
 
231 aa  62.4  0.000000005  Halothermothrix orenii H 168  Bacteria  normal  0.558941  n/a   
 
 
-
 
NC_013521  Sked_04890  cAMP-binding protein  27.75 
 
 
226 aa  62  0.000000006  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.84759 
 
 
-
 
NC_013946  Mrub_0426  Crp/Fnr family transcriptional regulator  29.94 
 
 
202 aa  62  0.000000007  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.86211 
 
 
-
 
NC_009077  Mjls_5205  Crp/FNR family transcriptional regulator  29.28 
 
 
224 aa  62  0.000000007  Mycobacterium sp. JLS  Bacteria  normal  0.703662  hitchhiker  0.000819508 
 
 
-
 
NC_008146  Mmcs_4818  Crp/FNR family transcriptional regulator  29.28 
 
 
224 aa  62  0.000000007  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_4904  Crp/FNR family transcriptional regulator  29.28 
 
 
224 aa  62  0.000000007  Mycobacterium sp. KMS  Bacteria  normal  normal  0.385516 
 
 
-
 
NC_014158  Tpau_3932  transcriptional regulator, Crp/Fnr family  28.65 
 
 
224 aa  62  0.000000007  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.571672  n/a   
 
 
-
 
NC_007778  RPB_1465  Crp/FNR family transcriptional regulator  27.93 
 
 
236 aa  61.6  0.000000008  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.342125  normal  0.439299 
 
 
-
 
NC_014212  Mesil_2484  transcriptional regulator, Crp/Fnr family  27.17 
 
 
202 aa  61.6  0.000000009  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.235796 
 
 
-
 
NC_008726  Mvan_5435  CRP/FNR family transcriptional regulator  29.28 
 
 
224 aa  61.6  0.000000009  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.397858 
 
 
-
 
NC_014151  Cfla_3095  transcriptional regulator, Crp/Fnr family  27.17 
 
 
220 aa  61.2  0.00000001  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.0000148221 
 
 
-
 
NC_011830  Dhaf_3158  transcriptional regulator, Crp/Fnr family  25.95 
 
 
223 aa  61.2  0.00000001  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_011666  Msil_1523  transcriptional regulator, Crp/Fnr family  25.84 
 
 
231 aa  60.8  0.00000001  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_012560  Avin_22000  transcriptional regulator, Crp/Fnr family  27.09 
 
 
235 aa  60.1  0.00000002  Azotobacter vinelandii DJ  Bacteria  normal  0.457493  n/a   
 
 
-
 
NC_009338  Mflv_1371  CRP/FNR family transcriptional regulator  29.28 
 
 
224 aa  60.5  0.00000002  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.0955358 
 
 
-
 
NC_007644  Moth_0824  Crp/FNR family transcriptional regulator  27.78 
 
 
225 aa  60.5  0.00000002  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0928817  normal  0.0486748 
 
 
-
 
NC_013216  Dtox_1633  transcriptional regulator, Crp/Fnr family  28.5 
 
 
226 aa  60.1  0.00000003  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.391452  normal  0.0281193 
 
 
-
 
NC_013946  Mrub_2129  Crp/Fnr family transcriptional regulator  29.44 
 
 
225 aa  59.7  0.00000003  Meiothermus ruber DSM 1279  Bacteria  normal  0.185639  normal  0.344505 
 
 
-
 
NC_009565  TBFG_13707  Cpr/FNR family transcriptional regulator  28.18 
 
 
224 aa  59.3  0.00000004  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.0333343 
 
 
-
 
NC_009767  Rcas_0252  Crp/FNR family transcriptional regulator  27.48 
 
 
218 aa  59.3  0.00000004  Roseiflexus castenholzii DSM 13941  Bacteria  unclonable  0.00000185636  normal  0.131428 
 
 
-
 
NC_009636  Smed_1742  CRP/FNR family transcriptional regulator  23.67 
 
 
242 aa  58.9  0.00000005  Sinorhizobium medicae WSM419  Bacteria  normal  0.275504  normal  0.265558 
 
 
-
 
NC_008340  Mlg_1070  Crp/FNR family transcriptional regulator  27.73 
 
 
235 aa  58.9  0.00000006  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.105875  normal 
 
 
-
 
NC_011773  BCAH820_0411  transcriptional regulator, Crp family  24.74 
 
 
229 aa  58.5  0.00000007  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.000553573 
 
 
-
 
NC_005957  BT9727_0345  Crp family transcriptional regulator  24.74 
 
 
229 aa  58.5  0.00000008  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.254354  n/a   
 
 
-
 
NC_013173  Dbac_2118  transcriptional regulator, Crp/Fnr family  28.98 
 
 
227 aa  58.5  0.00000008  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.545546  n/a   
 
 
-
 
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