23 homologs were found in PanDaTox collection
for query gene Cwoe_4004 on replicon NC_013739
Organism: Conexibacter woesei DSM 14684



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013739  Cwoe_4004  ABC-type sugar transport system periplasmic component-like protein  100 
 
 
399 aa  802    Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_0588  ABC-type sugar transport system periplasmic component-like  33.66 
 
 
390 aa  201  1.9999999999999998e-50  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_0604  ABC-type sugar transport system periplasmic component-like  32.9 
 
 
391 aa  182  9.000000000000001e-45  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_0099  ABC-type sugar transport system periplasmic component-like  25.64 
 
 
400 aa  70.1  0.00000000006  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_1810  ABC-type sugar transport system periplasmic component-like protein  24.15 
 
 
388 aa  62  0.00000002  Arthrobacter sp. FB24  Bacteria  normal  0.0233725  n/a   
 
 
-
 
NC_009484  Acry_2605  periplasmic binding protein/LacI transcriptional regulator  24.62 
 
 
346 aa  58.2  0.0000003  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_0806  ABC-type sugar transport system periplasmic component-like  24.82 
 
 
398 aa  58.2  0.0000003  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_3931  hypothetical protein  23.3 
 
 
366 aa  55.1  0.000002  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_2362  ABC-type sugar transport system periplasmic component-like protein  21.08 
 
 
380 aa  50.8  0.00004  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.0310858 
 
 
-
 
NC_008309  HS_0765  ABC-type sugar-binding periplasmic protein  21.43 
 
 
369 aa  50.1  0.00007  Haemophilus somnus 129PT  Bacteria  normal  0.234513  n/a   
 
 
-
 
NC_007511  Bcep18194_B2371  ABC sugar transporter, periplasmic ligand binding protein  26.05 
 
 
341 aa  48.9  0.0002  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_2711  putative sugar ABC transporter, substrate-binding protein  23.85 
 
 
369 aa  47.8  0.0004  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.210601 
 
 
-
 
NC_009668  Oant_4067  periplasmic binding protein/LacI transcriptional regulator  24 
 
 
329 aa  47.8  0.0004  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.0151386  n/a   
 
 
-
 
NC_004310  BR1630  LacI family sugar-binding transcriptional regulator  24 
 
 
329 aa  47  0.0005  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009505  BOV_1574  LacI family sugar-binding transcriptional regulator  24 
 
 
329 aa  47  0.0005  Brucella ovis ATCC 25840  Bacteria  normal  0.380877  n/a   
 
 
-
 
NC_013739  Cwoe_2342  ABC-type sugar transport system periplasmic component-like protein  22.47 
 
 
378 aa  47.4  0.0005  Conexibacter woesei DSM 14684  Bacteria  normal  0.759463  normal  0.08592 
 
 
-
 
NC_008699  Noca_0679  ABC-type sugar transport system periplasmic component-like  25.22 
 
 
387 aa  46.6  0.0007  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_1399  rhizopine-binding protein precursor  23.11 
 
 
328 aa  46.6  0.0007  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  decreased coverage  0.000528006  normal  0.827429 
 
 
-
 
NC_012917  PC1_3690  hypothetical protein  23.45 
 
 
366 aa  45.8  0.001  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_2044  periplasmic binding protein/LacI transcriptional regulator  26.38 
 
 
358 aa  45.4  0.002  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.707301 
 
 
-
 
NC_013421  Pecwa_3887  hypothetical protein  23.45 
 
 
366 aa  44.7  0.003  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_011368  Rleg2_4516  putative sugar ABC transporter, substrate-binding protein  32.5 
 
 
365 aa  43.5  0.006  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.112183  normal 
 
 
-
 
NC_010623  Bphy_5185  putative signal peptide protein  23.94 
 
 
377 aa  42.7  0.01  Burkholderia phymatum STM815  Bacteria  normal  0.296404  normal  0.0737238 
 
 
-
 
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