More than 300 homologs were found in PanDaTox collection
for query gene Csal_3001 on replicon NC_007963
Organism: Chromohalobacter salexigens DSM 3043



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007963  Csal_3001  binding-protein-dependent transport systems inner membrane component  100 
 
 
299 aa  593  1e-168  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.499686  n/a   
 
 
-
 
NC_007643  Rru_A0590  binding-protein dependent transport system inner membrane protein  65.71 
 
 
302 aa  382  1e-105  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.305304  n/a   
 
 
-
 
NC_012850  Rleg_3105  binding-protein-dependent transport systems inner membrane component  60.92 
 
 
305 aa  359  3e-98  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.238767  normal  0.85069 
 
 
-
 
NC_011369  Rleg2_2836  binding-protein-dependent transport systems inner membrane component  61.62 
 
 
305 aa  357  9.999999999999999e-98  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.824973 
 
 
-
 
NC_009654  Mmwyl1_4406  binding-protein-dependent transport systems inner membrane component  58.74 
 
 
308 aa  349  3e-95  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009524  PsycPRwf_0023  binding-protein-dependent transport systems inner membrane component  55.56 
 
 
301 aa  337  9.999999999999999e-92  Psychrobacter sp. PRwf-1  Bacteria  normal  normal 
 
 
-
 
NC_013456  VEA_002961  oligopeptide transport system permease protein OppC  55.67 
 
 
300 aa  335  5.999999999999999e-91  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_011312  VSAL_I1948  oligopeptide transport system permease protein C  56.94 
 
 
300 aa  335  7.999999999999999e-91  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_2699  binding-protein-dependent transport systems inner membrane component  58.36 
 
 
302 aa  331  7.000000000000001e-90  Serratia proteamaculans 568  Bacteria  hitchhiker  0.00582583  hitchhiker  0.00187492 
 
 
-
 
NC_009783  VIBHAR_02947  hypothetical protein  56.58 
 
 
302 aa  331  8e-90  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008347  Mmar10_0862  binding-protein-dependent transport systems inner membrane component  58.14 
 
 
301 aa  331  9e-90  Maricaulis maris MCS10  Bacteria  normal  0.69178  normal 
 
 
-
 
NC_009457  VC0395_A0611  oligopeptide ABC transporter, permease protein  56.94 
 
 
300 aa  330  1e-89  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_011080  SNSL254_A1872  oligopeptide ABC transporter permease protein OppC  58.36 
 
 
302 aa  330  2e-89  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.293082  normal 
 
 
-
 
NC_007912  Sde_2030  oligopeptide ABC transporter permease protein  56.64 
 
 
293 aa  329  3e-89  Saccharophagus degradans 2-40  Bacteria  normal  0.0128641  normal 
 
 
-
 
NC_011149  SeAg_B1401  oligopeptide ABC transporter, permease protein OppC  58.01 
 
 
302 aa  327  1.0000000000000001e-88  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011083  SeHA_C1935  oligopeptide ABC transporter permease OppC  58.01 
 
 
302 aa  327  1.0000000000000001e-88  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal  0.0740124 
 
 
-
 
NC_011205  SeD_A1583  oligopeptide ABC transporter permease OppC  58.01 
 
 
302 aa  327  1.0000000000000001e-88  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_011094  SeSA_A1878  oligopeptide ABC transporter permease OppC  58.01 
 
 
302 aa  327  1.0000000000000001e-88  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.991183  normal  0.695732 
 
 
-
 
NC_013456  VEA_003659  oligopeptide transport system permease protein OppC  52.63 
 
 
310 aa  327  2.0000000000000001e-88  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_2300  binding-protein-dependent transport systems inner membrane component  57.65 
 
 
302 aa  319  3.9999999999999996e-86  Enterobacter sp. 638  Bacteria  normal  0.137764  normal 
 
 
-
 
NC_012912  Dd1591_2193  binding-protein-dependent transport systems inner membrane component  59.07 
 
 
302 aa  318  6e-86  Dickeya zeae Ech1591  Bacteria  normal  0.0767914  n/a   
 
 
-
 
NC_010571  Oter_2419  binding-protein-dependent transport systems inner membrane component  55.7 
 
 
301 aa  318  6e-86  Opitutus terrae PB90-1  Bacteria  normal  normal  0.264728 
 
 
-
 
NC_007952  Bxe_B0755  ABC oligopeptide/dipeptide transporter, inner membrane subunit  56.12 
 
 
304 aa  317  1e-85  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
CP001509  ECD_01219  oligopeptide transporter subunit  58.72 
 
 
302 aa  316  4e-85  Escherichia coli BL21(DE3)  Bacteria  normal  0.224373  n/a   
 
 
-
 
CP001637  EcDH1_2403  binding-protein-dependent transport systems inner membrane component  58.72 
 
 
302 aa  316  4e-85  Escherichia coli DH1  Bacteria  hitchhiker  0.0051729  n/a   
 
 
-
 
NC_009708  YpsIP31758_1958  oligopeptide ABC transporter, permease protein OppC  58.36 
 
 
301 aa  315  4e-85  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.268975  n/a   
 
 
-
 
NC_012892  B21_01229  hypothetical protein  58.72 
 
 
302 aa  316  4e-85  Escherichia coli BL21  Bacteria  normal  0.239558  n/a   
 
 
-
 
NC_009800  EcHS_A1354  oligopeptide ABC transporter, permease protein OppC  58.72 
 
 
302 aa  316  4e-85  Escherichia coli HS  Bacteria  hitchhiker  0.000186421  n/a   
 
 
-
 
NC_010468  EcolC_2383  binding-protein-dependent transport systems inner membrane component  58.72 
 
 
302 aa  316  4e-85  Escherichia coli ATCC 8739  Bacteria  normal  hitchhiker  0.00000135484 
 
 
-
 
NC_009801  EcE24377A_1393  oligopeptide ABC transporter, permease protein OppC  58.72 
 
 
302 aa  316  4e-85  Escherichia coli E24377A  Bacteria  normal  0.380796  n/a   
 
 
-
 
NC_010465  YPK_2068  binding-protein-dependent transport systems inner membrane component  58.36 
 
 
301 aa  315  4e-85  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.303365  n/a   
 
 
-
 
NC_010159  YpAngola_A2161  oligopeptide transport system permease  58.36 
 
 
301 aa  315  4e-85  Yersinia pestis Angola  Bacteria  hitchhiker  0.00516752  normal  0.0301341 
 
 
-
 
NC_011353  ECH74115_1731  oligopeptide ABC transporter, permease protein OppC  58.72 
 
 
301 aa  315  5e-85  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.1425  normal  0.136954 
 
 
-
 
NC_010658  SbBS512_E1414  oligopeptide ABC transporter, permease protein OppC  58.36 
 
 
302 aa  314  9.999999999999999e-85  Shigella boydii CDC 3083-94  Bacteria  normal  0.585769  n/a   
 
 
-
 
NC_012880  Dd703_1952  binding-protein-dependent transport systems inner membrane component  58.36 
 
 
302 aa  314  9.999999999999999e-85  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_1895  oligopeptide ABC transporter, permease protein OppC  58.72 
 
 
301 aa  314  9.999999999999999e-85  Escherichia coli SMS-3-5  Bacteria  normal  0.213821  normal  0.110744 
 
 
-
 
NC_010676  Bphyt_4436  binding-protein-dependent transport systems inner membrane component  56.12 
 
 
304 aa  314  9.999999999999999e-85  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.673312 
 
 
-
 
NC_012917  PC1_1987  binding-protein-dependent transport systems inner membrane component  58.36 
 
 
302 aa  310  1e-83  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_2288  binding-protein-dependent transport systems inner membrane component  58.01 
 
 
302 aa  310  2e-83  Pectobacterium wasabiae WPP163  Bacteria  normal  0.0706527  n/a   
 
 
-
 
NC_010086  Bmul_3265  binding-protein-dependent transport systems inner membrane component  53.54 
 
 
300 aa  309  4e-83  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.0286495 
 
 
-
 
NC_010623  Bphy_4503  binding-protein-dependent transport systems inner membrane component  57 
 
 
296 aa  306  2.0000000000000002e-82  Burkholderia phymatum STM815  Bacteria  normal  normal  0.284812 
 
 
-
 
NC_010552  BamMC406_5411  binding-protein-dependent transport systems inner membrane component  52.86 
 
 
300 aa  307  2.0000000000000002e-82  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_008391  Bamb_4864  binding-protein-dependent transport systems inner membrane component  52.53 
 
 
300 aa  305  4.0000000000000004e-82  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_008061  Bcen_5320  binding-protein-dependent transport systems inner membrane component  52.53 
 
 
300 aa  305  5.0000000000000004e-82  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.474615  n/a   
 
 
-
 
NC_008543  Bcen2424_5540  binding-protein-dependent transport systems inner membrane component  52.53 
 
 
300 aa  305  5.0000000000000004e-82  Burkholderia cenocepacia HI2424  Bacteria  normal  0.988714  normal 
 
 
-
 
NC_010515  Bcenmc03_4732  binding-protein-dependent transport systems inner membrane component  54.74 
 
 
300 aa  305  8.000000000000001e-82  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008686  Pden_1326  binding-protein-dependent transport systems inner membrane component  53.31 
 
 
307 aa  301  1e-80  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_008686  Pden_1571  binding-protein-dependent transport systems inner membrane component  53.31 
 
 
307 aa  301  1e-80  Paracoccus denitrificans PD1222  Bacteria  normal  0.385135  normal  0.0216142 
 
 
-
 
NC_011981  Avi_7028  ABC transporter membrane spanning protein (oligopeptide)  51.2 
 
 
308 aa  298  9e-80  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_007511  Bcep18194_B0117  dipeptide/oligopeptide/nickel ABC transporter inner membrane protein  53.54 
 
 
300 aa  297  1e-79  Burkholderia sp. 383  Bacteria  normal  0.697818  normal 
 
 
-
 
NC_008254  Meso_0036  binding-protein-dependent transport systems inner membrane component  65.45 
 
 
379 aa  298  1e-79  Chelativorans sp. BNC1  Bacteria  normal  0.750131  n/a   
 
 
-
 
NC_007650  BTH_II2217  oligopeptide ABC transporter, permease protein  56.93 
 
 
300 aa  296  2e-79  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1251  putative oligopeptide transport system permease protein  56.93 
 
 
300 aa  296  3e-79  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A3017  oligopeptide ABC transporter, permease protein OppC  56.93 
 
 
300 aa  296  3e-79  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A2901  oligopeptide ABC transporter, permease protein OppC  56.93 
 
 
300 aa  296  3e-79  Burkholderia pseudomallei 1106a  Bacteria  decreased coverage  0.00914111  n/a   
 
 
-
 
NC_008784  BMASAVP1_1536  oligopeptide ABC transporter, permease protein OppC  56.2 
 
 
300 aa  295  9e-79  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_006349  BMAA0353  oligopeptide ABC transporter, permease protein  56.2 
 
 
300 aa  294  1e-78  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_1726  oligopeptide ABC transporter, permease protein OppC  56.2 
 
 
300 aa  294  1e-78  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A0387  oligopeptide ABC transporter, permease protein OppC  56.2 
 
 
300 aa  294  1e-78  Burkholderia mallei NCTC 10247  Bacteria  normal  0.510408  n/a   
 
 
-
 
NC_007802  Jann_3052  binding-protein-dependent transport systems inner membrane component  48.1 
 
 
317 aa  293  3e-78  Jannaschia sp. CCS1  Bacteria  normal  normal  0.367551 
 
 
-
 
NC_009428  Rsph17025_2888  binding-protein-dependent transport systems inner membrane component  67.12 
 
 
379 aa  289  5.0000000000000004e-77  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_009620  Smed_4687  binding-protein-dependent transport systems inner membrane component  71.69 
 
 
376 aa  286  2.9999999999999996e-76  Sinorhizobium medicae WSM419  Bacteria  normal  0.161422  normal  0.279284 
 
 
-
 
NC_007493  RSP_1479  ABC oligopeptide transporter, inner membrane subunit OppC  66.22 
 
 
379 aa  286  4e-76  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.230564  n/a   
 
 
-
 
NC_009049  Rsph17029_0130  binding-protein-dependent transport systems inner membrane component  66.22 
 
 
379 aa  286  4e-76  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.923959 
 
 
-
 
NC_009668  Oant_3601  binding-protein-dependent transport systems inner membrane component  66.67 
 
 
377 aa  280  1e-74  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_009504  BOV_A0465  oligopeptide ABC transporter, permease protein  66.67 
 
 
386 aa  279  5e-74  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_3780  binding-protein-dependent transport systems inner membrane component  56.3 
 
 
260 aa  278  7e-74  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.578435 
 
 
-
 
NC_010320  Teth514_0621  binding-protein-dependent transport systems inner membrane component  49.28 
 
 
310 aa  277  1e-73  Thermoanaerobacter sp. X514  Bacteria  normal  0.0465132  n/a   
 
 
-
 
NC_004311  BRA0535  oligopeptide ABC transporter, permease protein  66.82 
 
 
386 aa  276  3e-73  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_1403  ABC transporter membrane spanning protein (oligopeptide)  68.04 
 
 
373 aa  276  4e-73  Agrobacterium vitis S4  Bacteria  normal  0.0967501  n/a   
 
 
-
 
NC_010320  Teth514_0548  binding-protein-dependent transport systems inner membrane component  48.91 
 
 
310 aa  275  5e-73  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_010655  Amuc_0143  binding-protein-dependent transport systems inner membrane component  52.29 
 
 
310 aa  270  2.9999999999999997e-71  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  normal 
 
 
-
 
NC_010581  Bind_3464  binding-protein-dependent transport systems inner membrane component  60.36 
 
 
353 aa  261  1e-68  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.28935  normal 
 
 
-
 
NC_010505  Mrad2831_2887  binding-protein-dependent transport systems inner membrane component  60.45 
 
 
369 aa  254  2.0000000000000002e-66  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.517681  normal  0.475934 
 
 
-
 
NC_010725  Mpop_4789  binding-protein-dependent transport systems inner membrane component  61.93 
 
 
373 aa  248  8e-65  Methylobacterium populi BJ001  Bacteria  normal  normal  0.946772 
 
 
-
 
NC_011757  Mchl_4641  binding-protein-dependent transport systems inner membrane component  60.55 
 
 
363 aa  248  1e-64  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_4274  binding-protein-dependent transport systems inner membrane component  60.55 
 
 
363 aa  248  1e-64  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.874263 
 
 
-
 
NC_011894  Mnod_6091  cyclic nucleotide-binding protein  57.42 
 
 
366 aa  245  6.999999999999999e-64  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011666  Msil_1397  binding-protein-dependent transport systems inner membrane component  63.03 
 
 
369 aa  244  9.999999999999999e-64  Methylocella silvestris BL2  Bacteria  n/a    normal  0.659828 
 
 
-
 
NC_010511  M446_5345  binding-protein-dependent transport systems inner membrane component  60.44 
 
 
366 aa  241  1e-62  Methylobacterium sp. 4-46  Bacteria  normal  0.32763  normal  0.0491821 
 
 
-
 
NC_012034  Athe_1916  binding-protein-dependent transport systems inner membrane component  47.16 
 
 
325 aa  240  2e-62  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.00471699  n/a   
 
 
-
 
NC_008148  Rxyl_0868  binding-protein-dependent transport systems inner membrane component  42.3 
 
 
314 aa  239  2.9999999999999997e-62  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_2745  binding-protein-dependent transport systems inner membrane component  43.56 
 
 
313 aa  236  4e-61  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009012  Cthe_2964  binding-protein-dependent transport systems inner membrane component  43.58 
 
 
361 aa  236  4e-61  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_2452  binding-protein-dependent transport systems inner membrane component  43.32 
 
 
296 aa  234  1.0000000000000001e-60  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0368392  n/a   
 
 
-
 
NC_010718  Nther_2403  binding-protein-dependent transport systems inner membrane component  42.07 
 
 
304 aa  233  3e-60  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  hitchhiker  0.0000000292743  normal 
 
 
-
 
NC_014150  Bmur_0758  binding-protein-dependent transport systems inner membrane component  41.22 
 
 
327 aa  229  3e-59  Brachyspira murdochii DSM 12563  Bacteria  hitchhiker  0.0000093135  n/a   
 
 
-
 
NC_013552  DhcVS_930  ABC-type dipeptide/oligopeptide/nickel transport system, permease component  44.29 
 
 
301 aa  230  3e-59  Dehalococcoides sp. VS  Bacteria  normal  0.438382  n/a   
 
 
-
 
NC_009455  DehaBAV1_0941  binding-protein-dependent transport systems inner membrane component  43.93 
 
 
301 aa  229  3e-59  Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_002967  TDE0638  oligopeptide/dipeptide ABC transporter, permease protein  40.94 
 
 
320 aa  228  1e-58  Treponema denticola ATCC 35405  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_0758  binding-protein-dependent transport systems inner membrane component  38.61 
 
 
340 aa  226  4e-58  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_1236  binding-protein dependent transport system inner membrane protein  42.8 
 
 
284 aa  226  4e-58  Geobacter metallireducens GS-15  Bacteria  normal  0.143707  normal  0.209567 
 
 
-
 
NC_013522  Taci_0011  binding-protein-dependent transport systems inner membrane component  37.91 
 
 
307 aa  226  5.0000000000000005e-58  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_3019  binding-protein-dependent transport systems inner membrane component  39.51 
 
 
347 aa  224  1e-57  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.000434539  n/a   
 
 
-
 
NC_013525  Tter_0420  binding-protein-dependent transport systems inner membrane component  39.8 
 
 
313 aa  224  1e-57  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011898  Ccel_1766  binding-protein-dependent transport systems inner membrane component  40.99 
 
 
468 aa  223  4e-57  Clostridium cellulolyticum H10  Bacteria  normal  0.0164204  n/a   
 
 
-
 
NC_011661  Dtur_1137  binding-protein-dependent transport systems inner membrane component  39.16 
 
 
293 aa  222  4.9999999999999996e-57  Dictyoglomus turgidum DSM 6724  Bacteria  unclonable  0.0000000000296229  n/a   
 
 
-
 
NC_010831  Cphamn1_0983  binding-protein-dependent transport systems inner membrane component  48.18 
 
 
495 aa  221  9e-57  Chlorobium phaeobacteroides BS1  Bacteria  normal  0.99676  normal  0.0550466 
 
 
-
 
NC_011059  Paes_1494  binding-protein-dependent transport systems inner membrane component  47.03 
 
 
497 aa  220  1.9999999999999999e-56  Prosthecochloris aestuarii DSM 271  Bacteria  normal  normal  0.826633 
 
 
-
 
NC_002939  GSU1435  peptide ABC transporter, permease protein  42.07 
 
 
282 aa  220  3e-56  Geobacter sulfurreducens PCA  Bacteria  normal  0.557175  n/a   
 
 
-
 
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