More than 300 homologs were found in PanDaTox collection
for query gene Csal_0065 on replicon NC_007963
Organism: Chromohalobacter salexigens DSM 3043



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007963  Csal_0065  homocysteine S-methyltransferase  100 
 
 
349 aa  721    Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_2255  homocysteine S-methyltransferase  57.83 
 
 
350 aa  404  1e-111  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2133  homocysteine S-methyltransferase  34.67 
 
 
319 aa  183  4.0000000000000006e-45  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_0645  methionine synthase (B12-dependent)  27.72 
 
 
804 aa  103  3e-21  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.474097  n/a   
 
 
-
 
NC_002976  SERP0035  bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein  26.74 
 
 
612 aa  102  1e-20  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_0405  bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein  26.74 
 
 
613 aa  101  2e-20  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_009632  SaurJH1_0415  bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein  26.74 
 
 
613 aa  101  2e-20  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU2921  5-methyltetrahydrofolate-homocysteine methyltransferase, truncation  28.47 
 
 
804 aa  98.6  1e-19  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_0283  bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein  26.67 
 
 
615 aa  96.3  7e-19  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0262  homocysteine S-methyltransferase  27.36 
 
 
813 aa  95.5  1e-18  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00180962 
 
 
-
 
NC_010483  TRQ2_0680  homocysteine S-methyltransferase  24.43 
 
 
768 aa  93.2  6e-18  Thermotoga sp. RQ2  Bacteria  normal  0.412837  n/a   
 
 
-
 
NC_007517  Gmet_0549  methionine synthase (B12-dependent)  29.39 
 
 
804 aa  93.2  6e-18  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_009718  Fnod_0772  homocysteine S-methyltransferase  24.1 
 
 
780 aa  93.2  6e-18  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  0.0538889  n/a   
 
 
-
 
NC_013889  TK90_0182  methionine synthase  28 
 
 
1263 aa  92.8  8e-18  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_0489  homocysteine S-methyltransferase  27 
 
 
804 aa  92.4  1e-17  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_0656  homocysteine S-methyltransferase  25.32 
 
 
768 aa  92  1e-17  Thermotoga petrophila RKU-1  Bacteria  normal  0.79655  n/a   
 
 
-
 
NC_009972  Haur_3632  bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein  27.42 
 
 
617 aa  92  1e-17  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_2722  methionine synthase I (cobalamin-dependent) methyltransferase subunit  27.37 
 
 
801 aa  91.7  2e-17  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_0324  homocysteine S-methyltransferase  23.28 
 
 
413 aa  92  2e-17  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_1792  homocysteine S-methyltransferase  24.46 
 
 
774 aa  91.3  2e-17  Petrotoga mobilis SJ95  Bacteria  normal  0.709712  n/a   
 
 
-
 
NC_007498  Pcar_0238  bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein  26.13 
 
 
609 aa  90.9  3e-17  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_1617  homocysteine S-methyltransferase  28.94 
 
 
1189 aa  90.9  3e-17  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_0277  homocysteine S-methyltransferase  27.11 
 
 
811 aa  90.9  3e-17  Geobacter bemidjiensis Bem  Bacteria  normal  0.357222  n/a   
 
 
-
 
NC_011725  BCB4264_A4367  bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein  25.96 
 
 
610 aa  89  1e-16  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_29240  B12-dependent methionine synthase  26.82 
 
 
1278 aa  89  1e-16  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_1211  homocysteine S-methyltransferase  24.92 
 
 
807 aa  87.8  3e-16  Thermoanaerobacter sp. X514  Bacteria  normal  0.0179968  n/a   
 
 
-
 
NC_008740  Maqu_1526  B12-dependent methionine synthase  26.76 
 
 
1232 aa  87.8  3e-16  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_2544  methionine synthase  28.23 
 
 
1180 aa  87  4e-16  Herpetosiphon aurantiacus ATCC 23779  Bacteria  unclonable  0.00356448  n/a   
 
 
-
 
NC_009436  Ent638_0222  B12-dependent methionine synthase  28.24 
 
 
1227 aa  87  5e-16  Enterobacter sp. 638  Bacteria  normal  normal  0.145544 
 
 
-
 
NC_007513  Syncc9902_1123  5-methyltetrahydrofolate--homocysteine methyltransferase  27.7 
 
 
1208 aa  86.7  6e-16  Synechococcus sp. CC9902  Bacteria  decreased coverage  0.00712875  n/a   
 
 
-
 
NC_013411  GYMC61_1524  bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein  27.27 
 
 
615 aa  86.3  8e-16  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_002939  GSU2974  bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein  26.9 
 
 
605 aa  85.9  0.000000000000001  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_2211  methionine synthase  27.14 
 
 
1178 aa  85.5  0.000000000000001  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B0867  bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein  25.32 
 
 
610 aa  85.1  0.000000000000002  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_2159  B12-dependent methionine synthase  26.49 
 
 
1236 aa  85.1  0.000000000000002  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.088857 
 
 
-
 
NC_013440  Hoch_4784  homocysteine S-methyltransferase  28.84 
 
 
643 aa  85.1  0.000000000000002  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_011661  Dtur_0073  homocysteine S-methyltransferase  27.18 
 
 
290 aa  84.7  0.000000000000002  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_2375  B12-dependent methionine synthase  27.33 
 
 
1235 aa  84.3  0.000000000000003  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_3320  B12-dependent methionine synthase  27.33 
 
 
1235 aa  84  0.000000000000003  Pseudomonas putida F1  Bacteria  normal  normal  0.487541 
 
 
-
 
NC_010831  Cphamn1_2093  B12-dependent methionine synthase  27.85 
 
 
1227 aa  84.3  0.000000000000003  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal  0.883808 
 
 
-
 
NC_010501  PputW619_1888  B12-dependent methionine synthase  27 
 
 
1235 aa  84.3  0.000000000000003  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_4088  B12-dependent methionine synthase  25.83 
 
 
1251 aa  83.6  0.000000000000005  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.611508 
 
 
-
 
NC_011071  Smal_2611  homocysteine S-methyltransferase  27.09 
 
 
363 aa  83.2  0.000000000000006  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.186281 
 
 
-
 
NC_003909  BCE_4333  bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein  26.18 
 
 
610 aa  82.8  0.000000000000007  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS4157  bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein  26.09 
 
 
610 aa  83.2  0.000000000000007  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_3996  bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein  26.09 
 
 
610 aa  83.2  0.000000000000007  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK4006  bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein  26.09 
 
 
610 aa  83.2  0.000000000000007  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_4479  bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein  26.09 
 
 
610 aa  83.2  0.000000000000007  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_2941  homocysteine S-methyltransferase  25.53 
 
 
801 aa  82.8  0.000000000000007  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.651468  normal 
 
 
-
 
NC_011773  BCAH820_4275  bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein  26.09 
 
 
610 aa  83.2  0.000000000000007  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_011658  BCAH187_A4386  bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein  26.18 
 
 
610 aa  82.8  0.000000000000008  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_3449  B12-dependent methionine synthase  26.16 
 
 
1234 aa  82.8  0.000000000000008  Pseudomonas aeruginosa PA7  Bacteria  normal  0.625644  n/a   
 
 
-
 
NC_010322  PputGB1_1982  B12-dependent methionine synthase  26.67 
 
 
1235 aa  82.8  0.000000000000009  Pseudomonas putida GB-1  Bacteria  normal  0.0368395  normal  0.238169 
 
 
-
 
NC_010581  Bind_1123  B12-dependent methionine synthase  28.72 
 
 
1246 aa  82  0.00000000000001  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.833597 
 
 
-
 
NC_008009  Acid345_3426  bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein  25.23 
 
 
617 aa  82.4  0.00000000000001  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.41819  normal 
 
 
-
 
NC_012880  Dd703_0454  B12-dependent methionine synthase  26.32 
 
 
1228 aa  82.4  0.00000000000001  Dickeya dadantii Ech703  Bacteria  normal  0.0341811  n/a   
 
 
-
 
NC_008463  PA14_40670  B12-dependent methionine synthase  26.82 
 
 
1234 aa  82.4  0.00000000000001  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0754274  normal 
 
 
-
 
NC_008786  Veis_1195  methionine synthase  26.47 
 
 
370 aa  82.4  0.00000000000001  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.254798  normal 
 
 
-
 
NC_007492  Pfl01_3107  B12-dependent methionine synthase  26.67 
 
 
1236 aa  81.3  0.00000000000002  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_008025  Dgeo_1336  B12-dependent methionine synthase  27.52 
 
 
1226 aa  81.3  0.00000000000002  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.262937  normal 
 
 
-
 
NC_011899  Hore_19590  homocysteine S-methyltransferase  21.12 
 
 
819 aa  81.6  0.00000000000002  Halothermothrix orenii H 168  Bacteria  normal  0.399567  n/a   
 
 
-
 
NC_013525  Tter_1187  homocysteine S-methyltransferase  25.08 
 
 
629 aa  81.6  0.00000000000002  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_012793  GWCH70_0708  bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein  25.71 
 
 
616 aa  81.6  0.00000000000002  Geobacillus sp. WCH70  Bacteria  normal  0.0266464  n/a   
 
 
-
 
NC_010184  BcerKBAB4_4109  bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein  25.48 
 
 
610 aa  81.3  0.00000000000003  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_2804  methionine synthase  25.48 
 
 
1274 aa  80.9  0.00000000000003  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.294328 
 
 
-
 
NC_007908  Rfer_0460  5-methyltetrahydrofolate--homocysteine S-methyltransferase  27.68 
 
 
348 aa  80.5  0.00000000000004  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_0650  B12-dependent methionine synthase  25.58 
 
 
1250 aa  80.5  0.00000000000004  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_2133  methionine synthase  25.07 
 
 
1169 aa  80.5  0.00000000000004  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_0083  methionine synthase (B12-dependent)  26.85 
 
 
366 aa  80.5  0.00000000000004  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_013205  Aaci_1583  bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein  28.19 
 
 
637 aa  80.1  0.00000000000005  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_014248  Aazo_1661  methionine synthase  26.53 
 
 
1176 aa  80.1  0.00000000000005  'Nostoc azollae' 0708  Bacteria  normal  0.158089  n/a   
 
 
-
 
NC_011992  Dtpsy_0102  homocysteine S-methyltransferase  26.51 
 
 
344 aa  79.7  0.00000000000006  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_0710  B12-dependent methionine synthase  25.5 
 
 
1240 aa  80.1  0.00000000000006  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_3474  B12-dependent methionine synthase  27.3 
 
 
1251 aa  80.1  0.00000000000006  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_007484  Noc_1206  B12-dependent methionine synthase  25.33 
 
 
1232 aa  79.7  0.00000000000007  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_1889  B12-dependent methionine synthase  26.33 
 
 
1245 aa  79.7  0.00000000000007  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_0325  bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein  25.64 
 
 
605 aa  79.7  0.00000000000007  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2464  B12-dependent methionine synthase  25.25 
 
 
1239 aa  78.6  0.0000000000001  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.782684  normal  0.0191622 
 
 
-
 
NC_007204  Psyc_0403  B12-dependent methionine synthase  27.3 
 
 
1271 aa  79  0.0000000000001  Psychrobacter arcticus 273-4  Bacteria  normal  0.0459446  hitchhiker  0.000026899 
 
 
-
 
NC_007512  Plut_0315  B12-dependent methionine synthase  26.73 
 
 
1225 aa  79  0.0000000000001  Chlorobium luteolum DSM 273  Bacteria  normal  hitchhiker  0.000170465 
 
 
-
 
NC_012912  Dd1591_0369  B12-dependent methionine synthase  27.24 
 
 
1228 aa  78.6  0.0000000000001  Dickeya zeae Ech1591  Bacteria  normal  0.789152  n/a   
 
 
-
 
NC_011146  Gbem_0613  bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein  28.31 
 
 
610 aa  79  0.0000000000001  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008819  NATL1_10061  putative methionine synthase  25 
 
 
1182 aa  78.6  0.0000000000001  Prochlorococcus marinus str. NATL1A  Bacteria  normal  normal  0.0164665 
 
 
-
 
NC_002977  MCA1545  B12-dependent methionine synthase  25.68 
 
 
1237 aa  78.2  0.0000000000002  Methylococcus capsulatus str. Bath  Bacteria  normal  0.396086  n/a   
 
 
-
 
NC_010001  Cphy_3258  homocysteine S-methyltransferase  24.37 
 
 
841 aa  78.2  0.0000000000002  Clostridium phytofermentans ISDg  Bacteria  normal  0.728955  n/a   
 
 
-
 
NC_009441  Fjoh_1508  homocysteine S-methyltransferase  25.42 
 
 
334 aa  78.6  0.0000000000002  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_007516  Syncc9605_1355  methionine synthase (B12-dependent)  25.89 
 
 
1208 aa  78.6  0.0000000000002  Synechococcus sp. CC9605  Bacteria  normal  0.290102  normal  0.418289 
 
 
-
 
NC_007912  Sde_2010  B12-dependent methionine synthase  25.08 
 
 
1233 aa  78.2  0.0000000000002  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_3739  B12-dependent methionine synthase  25.9 
 
 
1252 aa  78.6  0.0000000000002  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_007954  Sden_1115  B12-dependent methionine synthase  25.33 
 
 
1241 aa  78.2  0.0000000000002  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_008346  Swol_1442  5-methyltetrahydrofolate-homocysteine methyltransferase, truncation  25.75 
 
 
839 aa  78.6  0.0000000000002  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.955782  n/a   
 
 
-
 
NC_011729  PCC7424_3230  methionine synthase  26.33 
 
 
1183 aa  77.8  0.0000000000002  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_013501  Rmar_2433  methionine synthase  26.17 
 
 
1236 aa  77.4  0.0000000000003  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_2965  B12-dependent methionine synthase  26.56 
 
 
1244 aa  77.8  0.0000000000003  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_2732  5-methyltetrahydrofolate--homocysteine methyltransferase  25.59 
 
 
1239 aa  77.8  0.0000000000003  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0346659  n/a   
 
 
-
 
NC_007335  PMN2A_0333  putative methionine synthase  25 
 
 
1182 aa  77.8  0.0000000000003  Prochlorococcus marinus str. NATL2A  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_4250  methionine synthase  27.83 
 
 
1261 aa  77.8  0.0000000000003  Spirosoma linguale DSM 74  Bacteria  normal  0.49174  normal 
 
 
-
 
NC_010803  Clim_2062  B12-dependent methionine synthase  26.54 
 
 
1228 aa  77.8  0.0000000000003  Chlorobium limicola DSM 245  Bacteria  normal  0.458303  n/a   
 
 
-
 
NC_007794  Saro_3207  methionine synthase (B12-dependent)  26 
 
 
358 aa  77.4  0.0000000000003  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_3368  B12-dependent methionine synthase  26.89 
 
 
1233 aa  77.4  0.0000000000003  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
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