10 homologs were found in PanDaTox collection
for query gene Cpin_5641 on replicon NC_013132
Organism: Chitinophaga pinensis DSM 2588



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013132  Cpin_5641  hypothetical protein  100 
 
 
667 aa  1372    Chitinophaga pinensis DSM 2588  Bacteria  unclonable  0.000000396754  normal  0.777644 
 
 
-
 
NC_013526  Tter_2744  hypothetical protein  33.85 
 
 
684 aa  191  2.9999999999999997e-47  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0330  hypothetical protein  32.11 
 
 
684 aa  146  1e-33  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_011206  Lferr_2588  hypothetical protein  27.49 
 
 
585 aa  144  7e-33  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
NC_011761  AFE_2974  hypothetical protein  27.49 
 
 
585 aa  144  7e-33  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_2448  PA14 domain protein  24.8 
 
 
1141 aa  111  4.0000000000000004e-23  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.84904  normal 
 
 
-
 
NC_010571  Oter_2896  hypothetical protein  27.01 
 
 
542 aa  106  1e-21  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_009376  Pars_1634  hypothetical protein  25.78 
 
 
789 aa  99.8  2e-19  Pyrobaculum arsenaticum DSM 13514  Archaea  normal  normal 
 
 
-
 
NC_010571  Oter_2955  hypothetical protein  22.72 
 
 
704 aa  89.4  2e-16  Opitutus terrae PB90-1  Bacteria  normal  0.279784  normal  0.44486 
 
 
-
 
NC_010571  Oter_2899  hypothetical protein  23.08 
 
 
550 aa  60.8  0.00000007  Opitutus terrae PB90-1  Bacteria  normal  0.627226  normal 
 
 
-
 
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