21 homologs were found in PanDaTox collection
for query gene Cpin_3892 on replicon NC_013132
Organism: Chitinophaga pinensis DSM 2588



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013132  Cpin_3892  hypothetical protein  100 
 
 		 421 aa  859    Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  0.0353742 
 
 
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NC_007794  Saro_0649  Phage major capsid protein, HK97  29.98 
 
 		 465 aa  140  3e-32  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.296668  n/a   
 
 
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NC_008044  TM1040_1668  phage major capsid protein, HK97  29.51 
 
 		 403 aa  136  9e-31  Ruegeria sp. TM1040  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007434  BURPS1710b_1682  HK97 family phage major capsid protein  28.71 
 
 		 418 aa  132  7.999999999999999e-30  Burkholderia pseudomallei 1710b  Bacteria  normal  1  n/a   
 
 
-
 
NC_011757  Mchl_1600  phage major capsid protein, HK97 family  26.72 
 
 		 433 aa  120  6e-26  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011663  Sbal223_2592  phage major capsid protein, HK97 family  27.5 
 
 		 396 aa  119  7.999999999999999e-26  Shewanella baltica OS223  Bacteria  normal  1  normal  0.339104 
 
 
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NC_002947  PP_1567  HK97 family phage major capsid protein  31.74 
 
 		 414 aa  117  3e-25  Pseudomonas putida KT2440  Bacteria  normal  0.944174  decreased coverage  0.0000690857 
 
 
-
 
NC_008686  Pden_0362  HK97 family phage major capsid protein  31.58 
 
 		 449 aa  117  6e-25  Paracoccus denitrificans PD1222  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008686  Pden_0991  HK97 family phage major capsid protein  31.58 
 
 		 449 aa  117  6e-25  Paracoccus denitrificans PD1222  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010501  PputW619_1339  HK97 family phage major capsid protein  31.46 
 
 		 418 aa  115  1.0000000000000001e-24  Pseudomonas putida W619  Bacteria  normal  1  normal  0.124448 
 
 
-
 
NC_010002  Daci_1634  major head protein  31.7 
 
 		 405 aa  108  1e-22  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_004347  SO_2963  prophage LambdaSo, HK97 family major capsid protein  27.92 
 
 		 396 aa  108  2e-22  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011094  SeSA_A4465  phage major capsid protein, HK97 family  28.95 
 
 		 405 aa  98.2  2e-19  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  1  hitchhiker  0.0000706363 
 
 
-
 
NC_010623  Bphy_3394  HK97 family phage major capsid protein  26.12 
 
 		 397 aa  90.5  6e-17  Burkholderia phymatum STM815  Bacteria  normal  1  hitchhiker  0.00000000537798 
 
 
-
 
NC_009050  Rsph17029_3318  HK97 family phage major capsid protein  24.17 
 
 		 433 aa  88.6  2e-16  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  1  normal  0.0235436 
 
 
-
 
NC_007493  RSP_2067  prophage LambdaSo, HK97 family major capsid protein  28.14 
 
 		 433 aa  87  6e-16  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.023752  n/a   
 
 
-
 
NC_009049  Rsph17029_0642  phage major head protein  27.07 
 
 		 403 aa  84  0.000000000000005  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013757  Gobs_3579  phage major capsid protein, HK97  27.99 
 
 		 411 aa  83.2  0.000000000000007  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.978109  n/a   
 
 
-
 
NC_010501  PputW619_3943  HK97 family phage major capsid protein  24.76 
 
 		 400 aa  80.9  0.00000000000004  Pseudomonas putida W619  Bacteria  normal  0.204605  normal  1 
 
 
-
 
NC_007204  Psyc_0461  major phage capsid subunit precursor  23.83 
 
 		 417 aa  67  0.0000000006  Psychrobacter arcticus 273-4  Bacteria  normal  1  normal  0.561977 
 
 
-
 
NC_011894  Mnod_1998  phage major capsid protein, HK97 family  31.25 
 
 		 438 aa  43.5  0.008  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
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