More than 300 homologs were found in PanDaTox collection
for query gene Cphy_3936 on replicon NC_010001
Organism: Clostridium phytofermentans ISDg



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010001  Cphy_3936  two component LuxR family transcriptional regulator  100 
 
 
213 aa  434  1e-121  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00507176  n/a   
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  55.14 
 
 
216 aa  233  1e-60  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_1863  two component transcriptional regulator, LuxR family  52.31 
 
 
216 aa  225  5e-58  Clostridium cellulolyticum H10  Bacteria  hitchhiker  5.48978e-06  n/a   
 
 
-
 
NC_010320  Teth514_2042  two component LuxR family transcriptional regulator  50.98 
 
 
208 aa  207  9e-53  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_2108  two component LuxR family transcriptional regulator  46.05 
 
 
218 aa  190  1e-47  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  45.71 
 
 
213 aa  186  2e-46  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_0806  two component LuxR family transcriptional regulator  39.81 
 
 
216 aa  182  4e-45  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_4227  two component LuxR family transcriptional regulator  44.29 
 
 
213 aa  181  5e-45  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.624898 
 
 
-
 
NC_014212  Mesil_2510  two component transcriptional regulator, LuxR family  41.71 
 
 
217 aa  179  2e-44  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_3240  two component transcriptional regulator, LuxR family  41.52 
 
 
224 aa  179  2e-44  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011899  Hore_21820  two component transcriptional regulator, LuxR family  45.28 
 
 
211 aa  178  5e-44  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_2325  two component transcriptional regulator, LuxR family  41.63 
 
 
228 aa  178  6e-44  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_5202  two component transcriptional regulator, LuxR family  40.19 
 
 
225 aa  176  2e-43  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.677169  normal  0.920773 
 
 
-
 
NC_007644  Moth_0975  two component LuxR family transcriptional regulator  42.65 
 
 
222 aa  176  2e-43  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_008025  Dgeo_0315  two component LuxR family transcriptional regulator  40.65 
 
 
214 aa  175  4e-43  Deinococcus geothermalis DSM 11300  Bacteria  normal  hitchhiker  0.0084678 
 
 
-
 
NC_009767  Rcas_1142  two component LuxR family transcriptional regulator  42.79 
 
 
222 aa  173  2e-42  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.661777  normal 
 
 
-
 
NC_008148  Rxyl_1550  two component LuxR family transcriptional regulator  37.96 
 
 
220 aa  172  4e-42  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_2028  two component LuxR family transcriptional regulator  44.44 
 
 
219 aa  172  5e-42  Anabaena variabilis ATCC 29413  Bacteria  normal  0.515359  normal 
 
 
-
 
NC_013522  Taci_0801  two component transcriptional regulator, LuxR family  38.79 
 
 
227 aa  171  9e-42  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A5591  DNA-binding response regulator  43.46 
 
 
215 aa  170  1e-41  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_1984  two component LuxR family transcriptional regulator  39.9 
 
 
220 aa  170  1e-41  Roseiflexus sp. RS-1  Bacteria  normal  0.178457  normal  0.123783 
 
 
-
 
NC_009767  Rcas_3262  two component LuxR family transcriptional regulator  40.38 
 
 
222 aa  170  1e-41  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.764026 
 
 
-
 
NC_007530  GBAA_5661  DNA-binding response regulator  43.46 
 
 
215 aa  169  2e-41  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_5506  DNA-binding response regulator  43.46 
 
 
215 aa  169  2e-41  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_008554  Sfum_1664  two component LuxR family transcriptional regulator  38.68 
 
 
218 aa  169  2e-41  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.49018  normal 
 
 
-
 
NC_005945  BAS5263  DNA-binding response regulator  43.46 
 
 
215 aa  169  2e-41  Bacillus anthracis str. Sterne  Bacteria  normal  0.24037  n/a   
 
 
-
 
NC_006274  BCZK5108  response regulator  43.46 
 
 
215 aa  169  2e-41  Bacillus cereus E33L  Bacteria  decreased coverage  0.00235048  n/a   
 
 
-
 
NC_005957  BT9727_5091  response regulator  43.46 
 
 
215 aa  169  2e-41  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_5540  DNA-binding response regulator  43.46 
 
 
215 aa  169  3e-41  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_2789  two component transcriptional regulator, LuxR family  41.43 
 
 
212 aa  168  5e-41  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.246733  n/a   
 
 
-
 
NC_008346  Swol_0186  response regulator receiver protein  42.45 
 
 
213 aa  168  7e-41  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  decreased coverage  3.27076e-06  n/a   
 
 
-
 
NC_011725  BCB4264_A5535  DNA-binding response regulator  42.52 
 
 
215 aa  167  9e-41  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0300  two component transcriptional regulator, LuxR family  38.5 
 
 
224 aa  167  1e-40  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013947  Snas_3745  two component transcriptional regulator, LuxR family  39.9 
 
 
235 aa  167  1e-40  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.627677  normal  0.255424 
 
 
-
 
NC_007333  Tfu_2491  LuxR response regulator receiver  39.09 
 
 
242 aa  166  2e-40  Thermobifida fusca YX  Bacteria  normal  0.470277  n/a   
 
 
-
 
NC_011772  BCG9842_B5417  DNA-binding response regulator  42.52 
 
 
215 aa  166  2e-40  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_0340  two component transcriptional regulator, LuxR family  39.25 
 
 
217 aa  166  2e-40  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00614189  hitchhiker  0.00317709 
 
 
-
 
NC_009674  Bcer98_0214  two component LuxR family transcriptional regulator  40.57 
 
 
220 aa  166  3e-40  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_0834  LuxR response regulator receiver  40.76 
 
 
221 aa  166  3e-40  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.0179337 
 
 
-
 
NC_007412  Ava_C0116  two component LuxR family transcriptional regulator  39.05 
 
 
209 aa  165  4e-40  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_012793  GWCH70_3043  two component transcriptional regulator, LuxR family  41.55 
 
 
225 aa  165  4e-40  Geobacillus sp. WCH70  Bacteria  decreased coverage  6.52561e-08  n/a   
 
 
-
 
NC_008148  Rxyl_2809  two component LuxR family transcriptional regulator  39.81 
 
 
219 aa  165  6e-40  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_04459  two-component system regulatory protein  40.57 
 
 
213 aa  165  6e-40  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_009455  DehaBAV1_0632  two component LuxR family transcriptional regulator  36.92 
 
 
224 aa  165  6e-40  Dehalococcoides sp. BAV1  Bacteria  hitchhiker  0.00385785  n/a   
 
 
-
 
NC_014165  Tbis_0228  LuxR family two component transcriptional regulator  42.51 
 
 
206 aa  164  7e-40  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  39.25 
 
 
218 aa  164  8e-40  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009455  DehaBAV1_0409  two component LuxR family transcriptional regulator  39.07 
 
 
232 aa  164  1e-39  Dehalococcoides sp. BAV1  Bacteria  normal  0.135269  n/a   
 
 
-
 
NC_009523  RoseRS_3421  two component LuxR family transcriptional regulator  40.55 
 
 
223 aa  164  1e-39  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.0556432 
 
 
-
 
NC_011831  Cagg_3359  two component transcriptional regulator, LuxR family  39.71 
 
 
219 aa  164  1e-39  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00321115  hitchhiker  0.000132937 
 
 
-
 
NC_010184  BcerKBAB4_5205  two component LuxR family transcriptional regulator  40.85 
 
 
215 aa  163  1e-39  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B3078  DNA-binding response regulator, LuxR family  38.86 
 
 
213 aa  164  1e-39  Bacillus cereus G9842  Bacteria  normal  hitchhiker  1.85138e-07 
 
 
-
 
NC_013552  DhcVS_374  DNA-binding response regulator, LuxR family  39.07 
 
 
232 aa  163  2e-39  Dehalococcoides sp. VS  Bacteria  hitchhiker  1.20759e-05  n/a   
 
 
-
 
NC_013595  Sros_0508  response regulator receiver protein  42.06 
 
 
212 aa  163  2e-39  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_1401  two component transcriptional regulator, LuxR family  39.62 
 
 
217 aa  162  3e-39  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.482316 
 
 
-
 
NC_011831  Cagg_1769  two component transcriptional regulator, LuxR family  39.15 
 
 
219 aa  162  3e-39  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.221401  normal  0.0578747 
 
 
-
 
NC_010184  BcerKBAB4_2087  two component LuxR family transcriptional regulator  38.86 
 
 
213 aa  162  4e-39  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0358431  n/a   
 
 
-
 
NC_008148  Rxyl_0160  two component LuxR family transcriptional regulator  37.44 
 
 
212 aa  162  4e-39  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_1051  two component transcriptional regulator, LuxR family  41.04 
 
 
211 aa  162  4e-39  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.0337978 
 
 
-
 
NC_009972  Haur_0983  two component LuxR family transcriptional regulator  39.61 
 
 
213 aa  162  4e-39  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_002936  DET0432  LuxR family DNA-binding response regulator  39.53 
 
 
232 aa  161  6e-39  Dehalococcoides ethenogenes 195  Bacteria  hitchhiker  0.00543066  n/a   
 
 
-
 
NC_005945  BAS2109  LuxR family DNA-binding response regulator  39.51 
 
 
209 aa  161  6e-39  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_2048  response regulator  39.51 
 
 
209 aa  161  6e-39  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.102554  n/a   
 
 
-
 
NC_006274  BCZK2046  response regulator  39.51 
 
 
209 aa  161  6e-39  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_2290  DNA-binding response regulator, LuxR family  39.51 
 
 
209 aa  161  6e-39  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  7.36213e-15 
 
 
-
 
NC_007530  GBAA_2265  LuxR family DNA-binding response regulator  39.51 
 
 
209 aa  161  6e-39  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.201191  n/a   
 
 
-
 
NC_013595  Sros_1684  response regulator receiver protein  39.42 
 
 
207 aa  161  8e-39  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.966789 
 
 
-
 
NC_002936  DET0697  LuxR family DNA-binding response regulator  36.45 
 
 
224 aa  161  8e-39  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_002936  DET0663  LuxR family DNA-binding response regulator  36.45 
 
 
224 aa  161  8e-39  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_2635  response regulator receiver  41.55 
 
 
207 aa  161  9e-39  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_008527  LACR_0967  DNA-binding response regulator  42.25 
 
 
209 aa  161  9e-39  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  0.598364  n/a   
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  41.74 
 
 
224 aa  160  1e-38  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_013552  DhcVS_601  DNA-binding response regulator, LuxR family  36.45 
 
 
224 aa  160  1e-38  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A2245  DNA-binding response regulator, LuxR family  38.39 
 
 
213 aa  160  1e-38  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_2804  two component transcriptional regulator, LuxR family  40.38 
 
 
216 aa  160  1e-38  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.995251  normal  0.311692 
 
 
-
 
NC_009654  Mmwyl1_0679  two component LuxR family transcriptional regulator  40.1 
 
 
213 aa  160  1e-38  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_3810  two component transcriptional regulator, LuxR family  39.19 
 
 
236 aa  160  1e-38  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.225059  normal  0.0261757 
 
 
-
 
NC_009972  Haur_2171  two component LuxR family transcriptional regulator  39.34 
 
 
218 aa  160  1e-38  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.0762379  n/a   
 
 
-
 
NC_004116  SAG0322  DNA-binding response regulator  41.43 
 
 
213 aa  159  2e-38  Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_1230  two component transcriptional regulator, LuxR family  41.23 
 
 
215 aa  159  2e-38  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_38420  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  39.07 
 
 
226 aa  159  2e-38  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013205  Aaci_0516  two component transcriptional regulator, LuxR family  41.07 
 
 
231 aa  160  2e-38  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A2375  DNA-binding response regulator, LuxR family  38.54 
 
 
209 aa  160  2e-38  Bacillus cereus AH187  Bacteria  normal  0.248491  n/a   
 
 
-
 
NC_011071  Smal_1099  two component transcriptional regulator, LuxR family  40.09 
 
 
213 aa  159  2e-38  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_009487  SaurJH9_1938  two component LuxR family transcriptional regulator  39.23 
 
 
209 aa  159  3e-38  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_009632  SaurJH1_1972  response regulator receiver  39.23 
 
 
209 aa  159  3e-38  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_2472  two component transcriptional regulator, LuxR family  36.62 
 
 
221 aa  159  3e-38  Conexibacter woesei DSM 14684  Bacteria  normal  0.0113125  hitchhiker  0.00367669 
 
 
-
 
NC_008148  Rxyl_2511  two component LuxR family transcriptional regulator  40.19 
 
 
229 aa  159  3e-38  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_008025  Dgeo_1708  two component LuxR family transcriptional regulator  38.28 
 
 
221 aa  159  3e-38  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.685529 
 
 
-
 
NC_014210  Ndas_4080  two component transcriptional regulator, LuxR family  37.5 
 
 
241 aa  159  3e-38  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.858367 
 
 
-
 
NC_013131  Caci_0175  two component transcriptional regulator, LuxR family  36.49 
 
 
222 aa  159  4e-38  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_0277  response regulator receiver protein  37.8 
 
 
214 aa  159  4e-38  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_1194  two component transcriptional regulator, LuxR family  38.97 
 
 
217 aa  159  4e-38  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.272513  n/a   
 
 
-
 
NC_013131  Caci_6980  two component transcriptional regulator, LuxR family  40.38 
 
 
213 aa  159  4e-38  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.999676 
 
 
-
 
NC_014165  Tbis_0775  LuxR family two component transcriptional regulator  36.41 
 
 
234 aa  158  5e-38  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.336237 
 
 
-
 
NC_013595  Sros_1910  response regulator receiver protein  39.53 
 
 
226 aa  158  5e-38  Streptosporangium roseum DSM 43021  Bacteria  normal  0.238062  normal  0.36963 
 
 
-
 
NC_008532  STER_1387  DNA-binding response regulator  41.35 
 
 
214 aa  158  5e-38  Streptococcus thermophilus LMD-9  Bacteria  hitchhiker  0.00141106  n/a   
 
 
-
 
NC_009675  Anae109_1810  two component LuxR family transcriptional regulator  39.73 
 
 
218 aa  158  6e-38  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_1417  response regulator receiver protein  35.48 
 
 
234 aa  158  6e-38  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0224272 
 
 
-
 
NC_013757  Gobs_1030  two component transcriptional regulator, LuxR family  37.98 
 
 
212 aa  158  6e-38  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_7589  two component transcriptional regulator, LuxR family  38.91 
 
 
225 aa  157  9e-38  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.438424  normal  0.37363 
 
 
-
 
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