More than 300 homologs were found in PanDaTox collection
for query gene Cphy_1172 on replicon NC_010001
Organism: Clostridium phytofermentans ISDg



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010001  Cphy_1172  methyl-accepting chemotaxis sensory transducer  100 
 
 
562 aa  1126    Clostridium phytofermentans ISDg  Bacteria  unclonable  0.00000023446  n/a   
 
 
-
 
NC_010001  Cphy_0285  methyl-accepting chemotaxis sensory transducer  46.81 
 
 
711 aa  282  1e-74  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_0298  methyl-accepting chemotaxis sensory transducer  37.36 
 
 
600 aa  222  9.999999999999999e-57  Clostridium thermocellum ATCC 27405  Bacteria  unclonable  0.000000337227  n/a   
 
 
-
 
NC_009012  Cthe_0039  methyl-accepting chemotaxis sensory transducer  35.45 
 
 
623 aa  206  1e-51  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_1053  methyl-accepting chemotaxis sensory transducer  37.99 
 
 
418 aa  201  3.9999999999999996e-50  Clostridium phytofermentans ISDg  Bacteria  decreased coverage  0.000000193482  n/a   
 
 
-
 
NC_012034  Athe_1768  methyl-accepting chemotaxis sensory transducer  37.17 
 
 
516 aa  200  7e-50  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_1498  methyl-accepting chemotaxis sensory transducer  31 
 
 
602 aa  198  2.0000000000000003e-49  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_0613  methyl-accepting chemotaxis sensory transducer  37.28 
 
 
759 aa  191  2e-47  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal  0.194714 
 
 
-
 
NC_011898  Ccel_2313  methyl-accepting chemotaxis sensory transducer  31.05 
 
 
567 aa  185  2.0000000000000003e-45  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_2967  methyl-accepting chemotaxis protein (MCP)  35.81 
 
 
695 aa  180  5.999999999999999e-44  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.000011738  n/a   
 
 
-
 
NC_009012  Cthe_3030  methyl-accepting chemotaxis sensory transducer  34.99 
 
 
832 aa  180  5.999999999999999e-44  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.00284544  n/a   
 
 
-
 
NC_007498  Pcar_1336  putative methyl-accepting chemotaxis protein (MCP)  31.46 
 
 
740 aa  180  8e-44  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00000000730785  n/a   
 
 
-
 
NC_013421  Pecwa_4084  methyl-accepting chemotaxis sensory transducer  28.92 
 
 
555 aa  178  3e-43  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_0368  methyl-accepting chemotaxis sensory transducer  32.79 
 
 
843 aa  174  5e-42  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.0662296 
 
 
-
 
NC_013204  Elen_2673  methyl-accepting chemotaxis sensory transducer  25.26 
 
 
524 aa  172  1e-41  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.647949 
 
 
-
 
NC_012917  PC1_2526  methyl-accepting chemotaxis sensory transducer  31.06 
 
 
554 aa  172  1e-41  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_0164  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  32.75 
 
 
1123 aa  172  2e-41  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_0184  methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor  32.75 
 
 
863 aa  170  5e-41  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_2831  methyl-accepting chemotaxis sensory transducer  31.81 
 
 
554 aa  169  9e-41  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_003296  RS04782  methyl-accepting chemotaxis transducer transmembrane protein  31.46 
 
 
543 aa  169  1e-40  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_0305  methyl-accepting chemotaxis sensory transducer  32.45 
 
 
841 aa  169  1e-40  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_1569  methyl-accepting chemotaxis sensory transducer  30.35 
 
 
554 aa  169  1e-40  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_4071  methyl-accepting chemotaxis sensory transducer  28.45 
 
 
553 aa  168  2e-40  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_3497  putative methyl-accepting chemotaxis sensory transducer  28.75 
 
 
860 aa  168  2e-40  Shewanella amazonensis SB2B  Bacteria  normal  0.19961  normal 
 
 
-
 
NC_012880  Dd703_3862  methyl-accepting chemotaxis sensory transducer  26.25 
 
 
555 aa  168  2.9999999999999998e-40  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_2791  methyl-accepting chemotaxis protein  36.21 
 
 
622 aa  167  4e-40  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_3910  methyl-accepting chemotaxis sensory transducer  27.24 
 
 
555 aa  167  4e-40  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_0400  methyl-accepting chemotaxis sensory transducer  32.54 
 
 
843 aa  167  5e-40  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  hitchhiker  0.00170819 
 
 
-
 
NC_010625  Bphy_6319  methyl-accepting chemotaxis sensory transducer  27.89 
 
 
549 aa  166  8e-40  Burkholderia phymatum STM815  Bacteria  normal  0.249944  normal 
 
 
-
 
NC_009092  Shew_0111  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  32.75 
 
 
864 aa  166  1.0000000000000001e-39  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_007912  Sde_3105  putative methyl-accepting chemotaxis sensory transducer  33.16 
 
 
767 aa  166  1.0000000000000001e-39  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_007498  Pcar_0439  methyl-accepting chemotaxis protein (MCP)  33.6 
 
 
740 aa  165  2.0000000000000002e-39  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_1372  putative methyl-accepting chemotaxis protein (MCP)  28.54 
 
 
706 aa  165  2.0000000000000002e-39  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_1858  methyl-accepting chemotaxis sensory transducer  28.04 
 
 
552 aa  165  2.0000000000000002e-39  Enterobacter sp. 638  Bacteria  normal  normal  0.332391 
 
 
-
 
NC_007498  Pcar_1355  putative methyl-accepting chemotaxis protein (MCP)  32.03 
 
 
744 aa  164  4.0000000000000004e-39  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_0695  methyl-accepting chemotaxis sensory transducer  25.44 
 
 
561 aa  164  4.0000000000000004e-39  Dickeya zeae Ech1591  Bacteria  normal  0.305861  n/a   
 
 
-
 
NC_013421  Pecwa_4454  methyl-accepting chemotaxis sensory transducer  28.26 
 
 
653 aa  164  5.0000000000000005e-39  Pectobacterium wasabiae WPP163  Bacteria  normal  0.625525  n/a   
 
 
-
 
NC_013421  Pecwa_4354  methyl-accepting chemotaxis sensory transducer  28.75 
 
 
555 aa  163  6e-39  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_0585  methyl-accepting chemotaxis protein (MCP)  35.26 
 
 
706 aa  163  9e-39  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.0000000000000132912  n/a   
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  26.1 
 
 
583 aa  162  1e-38  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_008752  Aave_0428  methyl-accepting chemotaxis sensory transducer  33.89 
 
 
597 aa  162  1e-38  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_1405  methyl-accepting chemotaxis sensory transducer  30.97 
 
 
548 aa  162  1e-38  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_1117  methyl-accepting chemotaxis protein  34.98 
 
 
657 aa  162  2e-38  Agrobacterium vitis S4  Bacteria  normal  0.593573  n/a   
 
 
-
 
NC_012917  PC1_4172  methyl-accepting chemotaxis sensory transducer  28.04 
 
 
653 aa  160  4e-38  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_3865  methyl-accepting chemotaxis sensory transducer  26.48 
 
 
551 aa  160  4e-38  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_4355  methyl-accepting chemotaxis sensory transducer  32.01 
 
 
540 aa  160  6e-38  Pectobacterium wasabiae WPP163  Bacteria  normal  0.31766  n/a   
 
 
-
 
NC_009436  Ent638_0416  methyl-accepting chemotaxis sensory transducer  31.12 
 
 
522 aa  160  6e-38  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_2019  methyl-accepting chemotaxis sensory transducer  28.86 
 
 
567 aa  160  6e-38  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_011368  Rleg2_5372  methyl-accepting chemotaxis sensory transducer  31.62 
 
 
627 aa  159  1e-37  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.756404 
 
 
-
 
NC_010681  Bphyt_2718  methyl-accepting chemotaxis sensory transducer with Cache sensor  37.89 
 
 
599 aa  159  1e-37  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_1542  methyl-accepting chemotaxis sensory transducer  28.26 
 
 
566 aa  159  1e-37  Dickeya zeae Ech1591  Bacteria  normal  0.350049  n/a   
 
 
-
 
NC_007498  Pcar_2607  methyl-accepting chemotaxis protein (MCP)  29.79 
 
 
741 aa  159  2e-37  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_1570  methyl-accepting chemotaxis sensory transducer  37.27 
 
 
517 aa  159  2e-37  Methylobacillus flagellatus KT  Bacteria  hitchhiker  0.000360574  hitchhiker  0.0000341158 
 
 
-
 
NC_012880  Dd703_0727  methyl-accepting chemotaxis sensory transducer  25.61 
 
 
559 aa  158  2e-37  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_4072  methyl-accepting chemotaxis sensory transducer  32.1 
 
 
540 aa  158  2e-37  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_010581  Bind_1798  methyl-accepting chemotaxis sensory transducer  28.94 
 
 
615 aa  158  2e-37  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.371991  normal 
 
 
-
 
NC_011989  Avi_1159  methyl-accepting chemotaxis protein  33.33 
 
 
671 aa  158  3e-37  Agrobacterium vitis S4  Bacteria  normal  0.573311  n/a   
 
 
-
 
NC_009436  Ent638_3407  methyl-accepting chemotaxis sensory transducer  29.52 
 
 
545 aa  158  3e-37  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_0111  methyl-accepting chemotaxis sensory transducer  26.1 
 
 
556 aa  157  3e-37  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_3923  methyl-accepting chemotaxis protein  30.4 
 
 
843 aa  157  3e-37  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_0395  methyl-accepting chemotaxis sensory transducer  35.66 
 
 
556 aa  158  3e-37  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_3834  methyl-accepting chemotaxis sensory transducer  27.87 
 
 
595 aa  157  4e-37  Delftia acidovorans SPH-1  Bacteria  normal  0.10184  normal  0.0113192 
 
 
-
 
NC_007951  Bxe_A1405  methyl-accepting chemotaxis sensory transducer  37.5 
 
 
599 aa  157  4e-37  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_22560  methyl-accepting chemotaxis sensory transducer  29.68 
 
 
659 aa  157  6e-37  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_3107  methyl-accepting chemotaxis sensory transducer  26.68 
 
 
542 aa  157  6e-37  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0161  methyl-accepting chemotaxis sensory transducer  31.51 
 
 
661 aa  156  7e-37  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.0270172 
 
 
-
 
NC_013421  Pecwa_0105  methyl-accepting chemotaxis sensory transducer  26.63 
 
 
556 aa  156  8e-37  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_3611  methyl-accepting chemotaxis sensory transducer  26.51 
 
 
540 aa  156  9e-37  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_5306  methyl-accepting chemotaxis sensory transducer  30.98 
 
 
565 aa  156  9e-37  Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.00488588  normal  0.0415564 
 
 
-
 
NC_011989  Avi_0793  methyl-accepting chemotaxis protein  32.94 
 
 
740 aa  156  1e-36  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1602  methyl-accepting chemotaxis sensory transducer  27.49 
 
 
554 aa  155  1e-36  Dickeya zeae Ech1591  Bacteria  normal  0.33331  n/a   
 
 
-
 
NC_007348  Reut_B5547  methyl-accepting chemotaxis sensory transducer  35.25 
 
 
520 aa  155  2e-36  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_2154  methyl-accepting chemotaxis sensory transducer  26.74 
 
 
569 aa  155  2e-36  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_2608  methyl-accepting chemotaxis protein  36.14 
 
 
655 aa  155  2e-36  Agrobacterium vitis S4  Bacteria  normal  0.445883  n/a   
 
 
-
 
NC_008609  Ppro_3147  methyl-accepting chemotaxis sensory transducer  30.61 
 
 
540 aa  155  2e-36  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0302394  n/a   
 
 
-
 
NC_012912  Dd1591_2086  methyl-accepting chemotaxis sensory transducer  28.22 
 
 
653 aa  155  2e-36  Dickeya zeae Ech1591  Bacteria  normal  0.0240769  n/a   
 
 
-
 
NC_011145  AnaeK_2477  methyl-accepting chemotaxis sensory transducer  30.13 
 
 
617 aa  154  2.9999999999999998e-36  Anaeromyxobacter sp. K  Bacteria  normal  0.200364  n/a   
 
 
-
 
NC_007520  Tcr_0361  methyl-accepting chemotaxis sensory transducer  31.03 
 
 
601 aa  154  2.9999999999999998e-36  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B2682  methyl-accepting chemotaxis sensory transducer  33.1 
 
 
580 aa  154  2.9999999999999998e-36  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_0940  methyl-accepting chemotaxis sensory transducer  29.95 
 
 
546 aa  154  2.9999999999999998e-36  Acidovorax citrulli AAC00-1  Bacteria  unclonable  0.000000958657  normal  0.647876 
 
 
-
 
NC_008789  Hhal_2163  methyl-accepting chemotaxis sensory transducer  32.16 
 
 
610 aa  154  2.9999999999999998e-36  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_2573  methyl-accepting chemotaxis sensory transducer  30.55 
 
 
621 aa  154  4e-36  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.650368  n/a   
 
 
-
 
NC_012918  GM21_3719  methyl-accepting chemotaxis sensory transducer  26.55 
 
 
540 aa  154  4e-36  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007963  Csal_1989  methyl-accepting chemotaxis sensory transducer  28.15 
 
 
556 aa  154  4e-36  Chromohalobacter salexigens DSM 3043  Bacteria  decreased coverage  0.00286784  n/a   
 
 
-
 
NC_011369  Rleg2_3216  methyl-accepting chemotaxis sensory transducer  28.37 
 
 
771 aa  154  4e-36  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.556382 
 
 
-
 
NC_007520  Tcr_0777  methyl-accepting chemotaxis sensory transducer  33.14 
 
 
712 aa  154  5e-36  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_011083  SeHA_C3400  methyl-accepting chemotaxis sensory transducer  34.63 
 
 
547 aa  154  5.9999999999999996e-36  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal  0.779493 
 
 
-
 
NC_011368  Rleg2_4775  methyl-accepting chemotaxis sensory transducer  31.45 
 
 
842 aa  154  5.9999999999999996e-36  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.507772  normal 
 
 
-
 
NC_009656  PSPA7_0256  chemotaxis transducer  35.59 
 
 
679 aa  153  7e-36  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_0104  methyl-accepting chemotaxis sensory transducer  30.97 
 
 
622 aa  153  7e-36  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_1547  methyl-accepting chemotaxis protein  30.72 
 
 
635 aa  153  8e-36  Agrobacterium vitis S4  Bacteria  normal  0.0672502  n/a   
 
 
-
 
NC_007908  Rfer_2507  methyl-accepting chemotaxis sensory transducer  28.6 
 
 
589 aa  153  8e-36  Rhodoferax ferrireducens T118  Bacteria  normal  0.197123  n/a   
 
 
-
 
NC_010086  Bmul_4247  methyl-accepting chemotaxis sensory transducer with Cache sensor  30.79 
 
 
599 aa  153  8.999999999999999e-36  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B3779  methyl-accepting chemotaxis protein  30.66 
 
 
547 aa  152  1e-35  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_00039  chemotaxis protein  30.95 
 
 
775 aa  153  1e-35  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.371493  n/a   
 
 
-
 
NC_012880  Dd703_2474  methyl-accepting chemotaxis sensory transducer  28.83 
 
 
552 aa  152  1e-35  Dickeya dadantii Ech703  Bacteria  normal  0.356267  n/a   
 
 
-
 
NC_012912  Dd1591_4048  methyl-accepting chemotaxis sensory transducer  25.36 
 
 
542 aa  152  1e-35  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_011149  SeAg_B3326  methyl-accepting chemotaxis sensory transducer  34.63 
 
 
547 aa  152  1e-35  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011205  SeD_A3501  methyl-accepting chemotaxis sensory transducer  34.63 
 
 
547 aa  153  1e-35  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.601659  normal 
 
 
-
 
NC_008825  Mpe_A2663  methyl-accepting chemotaxis sensory transducer  30.77 
 
 
520 aa  152  1e-35  Methylibium petroleiphilum PM1  Bacteria  normal  0.0198398  normal 
 
 
-
 
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