More than 300 homologs were found in PanDaTox collection
for query gene Cphy_0594 on replicon NC_010001
Organism: Clostridium phytofermentans ISDg



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010001  Cphy_0594  binding-protein-dependent transport systems inner membrane component  100 
 
 
293 aa  594  1e-169  Clostridium phytofermentans ISDg  Bacteria  decreased coverage  0.0000740706  n/a   
 
 
-
 
NC_009616  Tmel_1014  binding-protein-dependent transport systems inner membrane component  42.91 
 
 
273 aa  227  2e-58  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2216  binding-protein-dependent transport systems inner membrane component  43.02 
 
 
301 aa  223  4e-57  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3791  binding-protein-dependent transport systems inner membrane component  41.37 
 
 
300 aa  221  9.999999999999999e-57  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.17142  normal 
 
 
-
 
NC_013526  Tter_2317  binding-protein-dependent transport systems inner membrane component  40.36 
 
 
299 aa  217  2e-55  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_2544  binding-protein-dependent transport systems inner membrane component  36.24 
 
 
299 aa  201  1.9999999999999998e-50  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.238071  normal  0.0688071 
 
 
-
 
NC_010320  Teth514_1101  binding-protein-dependent transport systems inner membrane component  38.11 
 
 
280 aa  200  1.9999999999999998e-50  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2452  binding-protein-dependent transport systems inner membrane component  38.78 
 
 
299 aa  199  3.9999999999999996e-50  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.0352539  n/a   
 
 
-
 
NC_009523  RoseRS_2820  binding-protein-dependent transport systems inner membrane component  36.11 
 
 
299 aa  198  9e-50  Roseiflexus sp. RS-1  Bacteria  hitchhiker  0.0050805  normal 
 
 
-
 
NC_011886  Achl_0497  binding-protein-dependent transport systems inner membrane component  36.12 
 
 
306 aa  197  1.0000000000000001e-49  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000825086 
 
 
-
 
NC_012669  Bcav_1470  binding-protein-dependent transport systems inner membrane component  34.16 
 
 
305 aa  195  8.000000000000001e-49  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013517  Sterm_4048  binding-protein-dependent transport systems inner membrane component  38.73 
 
 
287 aa  193  2e-48  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2512  binding-protein-dependent transport systems inner membrane component  36.43 
 
 
292 aa  193  3e-48  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.660216  n/a   
 
 
-
 
NC_013525  Tter_0124  binding-protein-dependent transport systems inner membrane component  39.47 
 
 
277 aa  193  4e-48  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_012669  Bcav_0312  binding-protein-dependent transport systems inner membrane component  39.62 
 
 
298 aa  192  5e-48  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_4881  binding-protein-dependent transport systems inner membrane component  37.12 
 
 
295 aa  191  1e-47  Conexibacter woesei DSM 14684  Bacteria  normal  0.48115  normal 
 
 
-
 
NC_013526  Tter_2135  binding-protein-dependent transport systems inner membrane component  36.98 
 
 
296 aa  191  2e-47  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_3620  binding-protein-dependent transport systems inner membrane component  38.38 
 
 
302 aa  189  2.9999999999999997e-47  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013525  Tter_0264  binding-protein-dependent transport systems inner membrane component  36.15 
 
 
307 aa  189  5e-47  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013517  Sterm_0699  binding-protein-dependent transport systems inner membrane component  37.31 
 
 
301 aa  188  9e-47  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0185  binding-protein-dependent transport systems inner membrane component  34.27 
 
 
301 aa  188  9e-47  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013517  Sterm_0717  binding-protein-dependent transport systems inner membrane component  38.78 
 
 
279 aa  187  1e-46  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2507  binding-protein-dependent transport systems inner membrane component  40.16 
 
 
296 aa  188  1e-46  Thermobaculum terrenum ATCC BAA-798  Bacteria  decreased coverage  0.00000371485  n/a   
 
 
-
 
NC_008541  Arth_3322  binding-protein-dependent transport systems inner membrane component  36.11 
 
 
309 aa  187  2e-46  Arthrobacter sp. FB24  Bacteria  normal  0.0903437  n/a   
 
 
-
 
NC_013521  Sked_05440  carbohydrate ABC transporter membrane protein  34.25 
 
 
307 aa  187  3e-46  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.050978  normal 
 
 
-
 
NC_013521  Sked_05240  carbohydrate ABC transporter membrane protein  38.11 
 
 
312 aa  186  3e-46  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2522  binding-protein-dependent transport systems inner membrane component  36.3 
 
 
297 aa  186  5e-46  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00000000227991  n/a   
 
 
-
 
NC_012034  Athe_2079  binding-protein-dependent transport systems inner membrane component  37.92 
 
 
280 aa  185  7e-46  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.697078  n/a   
 
 
-
 
NC_011886  Achl_3122  binding-protein-dependent transport systems inner membrane component  35.25 
 
 
305 aa  184  1.0000000000000001e-45  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.290341 
 
 
-
 
NC_009523  RoseRS_1358  binding-protein-dependent transport systems inner membrane component  36.27 
 
 
291 aa  184  1.0000000000000001e-45  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_29710  carbohydrate ABC transporter membrane protein  37.36 
 
 
304 aa  183  3e-45  Brachybacterium faecium DSM 4810  Bacteria  normal  0.942295  n/a   
 
 
-
 
NC_013530  Xcel_2536  binding-protein-dependent transport systems inner membrane component  36.84 
 
 
306 aa  182  4.0000000000000006e-45  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.250656  n/a   
 
 
-
 
NC_009767  Rcas_0515  binding-protein-dependent transport systems inner membrane component  38.73 
 
 
302 aa  183  4.0000000000000006e-45  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_20610  binding-protein-dependent transport systems inner membrane component  39.69 
 
 
273 aa  182  4.0000000000000006e-45  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_3955  binding-protein-dependent transport systems inner membrane component  37.55 
 
 
274 aa  180  2e-44  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_012034  Athe_2374  binding-protein-dependent transport systems inner membrane component  35.56 
 
 
285 aa  179  4.999999999999999e-44  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_4986  binding-protein-dependent transport systems inner membrane component  36.12 
 
 
301 aa  179  4.999999999999999e-44  Catenulispora acidiphila DSM 44928  Bacteria  hitchhiker  0.00963253  hitchhiker  0.006941 
 
 
-
 
NC_007333  Tfu_1703  putative transport system permease ABC transporter protein  33.22 
 
 
292 aa  179  5.999999999999999e-44  Thermobifida fusca YX  Bacteria  normal  0.757038  n/a   
 
 
-
 
NC_014210  Ndas_2035  binding-protein-dependent transport systems inner membrane component  34.4 
 
 
291 aa  179  7e-44  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0974901  normal  0.381629 
 
 
-
 
NC_013525  Tter_0506  binding-protein-dependent transport systems inner membrane component  35.27 
 
 
294 aa  179  7e-44  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013526  Tter_2040  binding-protein-dependent transport systems inner membrane component  36.09 
 
 
305 aa  178  8e-44  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00998336  n/a   
 
 
-
 
NC_010001  Cphy_3400  binding-protein-dependent transport systems inner membrane component  35.34 
 
 
283 aa  178  8e-44  Clostridium phytofermentans ISDg  Bacteria  normal  0.372936  n/a   
 
 
-
 
NC_009767  Rcas_3565  binding-protein-dependent transport systems inner membrane component  38.61 
 
 
291 aa  178  9e-44  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.276199 
 
 
-
 
NC_013526  Tter_2301  binding-protein-dependent transport systems inner membrane component  39.53 
 
 
285 aa  178  1e-43  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.866945  n/a   
 
 
-
 
NC_013595  Sros_5822  putative sugar uptake ABC transporter permease protein  38.02 
 
 
298 aa  177  2e-43  Streptosporangium roseum DSM 43021  Bacteria  normal  0.546263  normal 
 
 
-
 
NC_012669  Bcav_2601  binding-protein-dependent transport systems inner membrane component  37.02 
 
 
275 aa  177  2e-43  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.260696  normal 
 
 
-
 
NC_013205  Aaci_2458  binding-protein-dependent transport systems inner membrane component  36.9 
 
 
281 aa  176  3e-43  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.162326  n/a   
 
 
-
 
NC_009708  YpsIP31758_1690  oligogalacturonide ABC tansporter, permease protein  36.04 
 
 
306 aa  174  9.999999999999999e-43  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.064753  n/a   
 
 
-
 
NC_010159  YpAngola_A2646  oligogalacturonide ABC tansporter, permease  36.04 
 
 
306 aa  174  9.999999999999999e-43  Yersinia pestis Angola  Bacteria  normal  0.559892  normal  0.131938 
 
 
-
 
NC_010465  YPK_1800  binding-protein-dependent transport systems inner membrane component  36.04 
 
 
306 aa  174  9.999999999999999e-43  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.429267  n/a   
 
 
-
 
NC_013093  Amir_2918  binding-protein-dependent transport systems inner membrane component  34.93 
 
 
290 aa  174  1.9999999999999998e-42  Actinosynnema mirum DSM 43827  Bacteria  normal  0.787566  n/a   
 
 
-
 
NC_009436  Ent638_3290  binding-protein-dependent transport systems inner membrane component  34.54 
 
 
300 aa  172  5e-42  Enterobacter sp. 638  Bacteria  normal  normal  0.237365 
 
 
-
 
NC_009565  TBFG_12076  sugar ABC transporter membrane protein  36.86 
 
 
280 aa  172  5e-42  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_011988  Avi_5582  ABC transporter membrane spanning protein (galacturonic acid)  34.45 
 
 
293 aa  172  5.999999999999999e-42  Agrobacterium vitis S4  Bacteria  normal  0.542291  n/a   
 
 
-
 
NC_012669  Bcav_1657  binding-protein-dependent transport systems inner membrane component  36.82 
 
 
284 aa  172  6.999999999999999e-42  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.354053  normal  0.174244 
 
 
-
 
NC_013739  Cwoe_3981  binding-protein-dependent transport systems inner membrane component  36.15 
 
 
274 aa  172  7.999999999999999e-42  Conexibacter woesei DSM 14684  Bacteria  normal  0.270796  normal 
 
 
-
 
NC_013131  Caci_3806  binding-protein-dependent transport systems inner membrane component  34.29 
 
 
300 aa  171  1e-41  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_4633  binding-protein-dependent transport systems inner membrane component  35.97 
 
 
275 aa  170  2e-41  Nocardioides sp. JS614  Bacteria  normal  0.326622  n/a   
 
 
-
 
NC_012669  Bcav_3574  Monosaccharide-transporting ATPase  36.05 
 
 
290 aa  171  2e-41  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.156852  normal 
 
 
-
 
NC_012669  Bcav_1532  binding-protein-dependent transport systems inner membrane component  36.4 
 
 
305 aa  170  3e-41  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.995394  normal  0.0303683 
 
 
-
 
NC_009636  Smed_3327  binding-protein-dependent transport systems inner membrane component  36.43 
 
 
295 aa  170  3e-41  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.925961 
 
 
-
 
NC_003909  BCE_1901  sugar ABC transporter, permease protein  34.18 
 
 
277 aa  169  4e-41  Bacillus cereus ATCC 10987  Bacteria  normal  0.682079  n/a   
 
 
-
 
NC_009939  Dgeo_2917  ABC-type sugar transport system, permease component  39.13 
 
 
273 aa  169  5e-41  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_012669  Bcav_3989  binding-protein-dependent transport systems inner membrane component  34.87 
 
 
324 aa  169  5e-41  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_006274  BCZK1636  sugar ABC transporter, permease  34.22 
 
 
277 aa  169  6e-41  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0791  binding-protein-dependent transport systems inner membrane component  32.19 
 
 
308 aa  169  6e-41  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.013285 
 
 
-
 
NC_013517  Sterm_4035  binding-protein-dependent transport systems inner membrane component  30.8 
 
 
275 aa  169  6e-41  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_7904  binding-protein-dependent transport systems inner membrane component  36.05 
 
 
271 aa  169  7e-41  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_011661  Dtur_0439  binding-protein-dependent transport systems inner membrane component  32.62 
 
 
279 aa  168  8e-41  Dictyoglomus turgidum DSM 6724  Bacteria  normal  0.0806983  n/a   
 
 
-
 
NC_013093  Amir_0972  binding-protein-dependent transport systems inner membrane component  34.23 
 
 
276 aa  168  9e-41  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_2094  binding-protein dependent transport system inner membrane protein  35 
 
 
279 aa  168  1e-40  Anabaena variabilis ATCC 29413  Bacteria  normal  0.179988  hitchhiker  0.00000184258 
 
 
-
 
NC_013530  Xcel_0899  binding-protein-dependent transport systems inner membrane component  36.54 
 
 
308 aa  168  1e-40  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.408611  n/a   
 
 
-
 
NC_012669  Bcav_0802  binding-protein-dependent transport systems inner membrane component  33.85 
 
 
286 aa  167  2e-40  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.0123708 
 
 
-
 
NC_008541  Arth_3141  binding-protein-dependent transport systems inner membrane component  35.27 
 
 
300 aa  167  2e-40  Arthrobacter sp. FB24  Bacteria  normal  0.522421  n/a   
 
 
-
 
NC_009654  Mmwyl1_0775  binding-protein-dependent transport systems inner membrane component  33.67 
 
 
303 aa  167  2e-40  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_4695  binding-protein-dependent transport systems inner membrane component  35.66 
 
 
271 aa  167  2e-40  Catenulispora acidiphila DSM 44928  Bacteria  hitchhiker  0.00258755  normal  0.655339 
 
 
-
 
NC_009664  Krad_2231  binding-protein-dependent transport systems inner membrane component  32.66 
 
 
297 aa  167  2.9999999999999998e-40  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.807172 
 
 
-
 
NC_008010  Dgeo_2724  binding-protein-dependent transport systems inner membrane component  33.22 
 
 
290 aa  166  4e-40  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.191447  n/a   
 
 
-
 
NC_013411  GYMC61_2729  binding-protein-dependent transport systems inner membrane component  34.69 
 
 
293 aa  166  5.9999999999999996e-40  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011886  Achl_3129  binding-protein-dependent transport systems inner membrane component  34.14 
 
 
313 aa  165  6.9999999999999995e-40  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.0180019 
 
 
-
 
NC_007413  Ava_2532  binding-protein dependent transport system inner membrane protein  37.5 
 
 
275 aa  165  8e-40  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_3568  binding-protein-dependent transport systems inner membrane component  35.43 
 
 
315 aa  164  1.0000000000000001e-39  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_008541  Arth_3327  binding-protein-dependent transport systems inner membrane component  34.81 
 
 
314 aa  164  1.0000000000000001e-39  Arthrobacter sp. FB24  Bacteria  hitchhiker  0.00328886  n/a   
 
 
-
 
NC_010001  Cphy_0621  binding-protein-dependent transport systems inner membrane component  33.57 
 
 
289 aa  164  1.0000000000000001e-39  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00195134  n/a   
 
 
-
 
NC_012669  Bcav_3001  binding-protein-dependent transport systems inner membrane component  32.33 
 
 
308 aa  164  1.0000000000000001e-39  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_2142  binding-protein-dependent transport systems inner membrane component  34.46 
 
 
293 aa  164  2.0000000000000002e-39  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1507  binding-protein-dependent transport systems inner membrane component  32.4 
 
 
303 aa  163  3e-39  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.659062  normal 
 
 
-
 
NC_012850  Rleg_4346  binding-protein-dependent transport systems inner membrane component  35.93 
 
 
292 aa  163  3e-39  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  hitchhiker  0.0000934569 
 
 
-
 
NC_012669  Bcav_4196  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
292 aa  162  4.0000000000000004e-39  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009486  Tpet_0634  binding-protein-dependent transport systems inner membrane component  36.04 
 
 
284 aa  162  5.0000000000000005e-39  Thermotoga petrophila RKU-1  Bacteria  normal  0.146391  n/a   
 
 
-
 
NC_013530  Xcel_2649  binding-protein-dependent transport systems inner membrane component  35.09 
 
 
300 aa  162  5.0000000000000005e-39  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_0659  binding-protein-dependent transport systems inner membrane component  36.04 
 
 
284 aa  162  5.0000000000000005e-39  Thermotoga sp. RQ2  Bacteria  normal  0.0401383  n/a   
 
 
-
 
NC_011369  Rleg2_4017  binding-protein-dependent transport systems inner membrane component  35.19 
 
 
292 aa  162  6e-39  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.924355  normal 
 
 
-
 
NC_011899  Hore_04290  binding-protein-dependent transport systems inner membrane component  33.67 
 
 
297 aa  162  6e-39  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_014213  Mesil_3228  binding-protein-dependent transport systems inner membrane component  35.97 
 
 
272 aa  162  7e-39  Meiothermus silvanus DSM 9946  Bacteria  decreased coverage  0.00685083  normal 
 
 
-
 
NC_014213  Mesil_3420  proteophosphoglycan ppg4  35.97 
 
 
272 aa  162  7e-39  Meiothermus silvanus DSM 9946  Bacteria  normal  0.257772  normal 
 
 
-
 
NC_011881  Achl_4623  binding-protein-dependent transport systems inner membrane component  35.06 
 
 
285 aa  162  7e-39  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_014248  Aazo_3424  binding-protein-dependent transporter inner membrane protein  34.48 
 
 
277 aa  161  1e-38  'Nostoc azollae' 0708  Bacteria  normal  0.224569  n/a   
 
 
-
 
NC_012669  Bcav_0921  binding-protein-dependent transport systems inner membrane component  38.74 
 
 
284 aa  161  1e-38  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_4398  Monosaccharide-transporting ATPase  30.96 
 
 
281 aa  160  2e-38  Cyanothece sp. PCC 7425  Bacteria  hitchhiker  0.000709548  normal  0.804646 
 
 
-
 
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