More than 300 homologs were found in PanDaTox collection
for query gene Cphamn1_0312 on replicon NC_010831
Organism: Chlorobium phaeobacteroides BS1



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010831  Cphamn1_0312  short-chain dehydrogenase/reductase SDR  100 
 
 
261 aa  533  1e-150  Chlorobium phaeobacteroides BS1  Bacteria  hitchhiker  0.0000113464  decreased coverage  0.000120518 
 
 
-
 
NC_011059  Paes_0281  short-chain dehydrogenase/reductase SDR  57.65 
 
 
255 aa  313  1.9999999999999998e-84  Prosthecochloris aestuarii DSM 271  Bacteria  hitchhiker  0.000634692  hitchhiker  0.00117931 
 
 
-
 
NC_007512  Plut_1969  short chain dehydrogenase/reductase family oxidoreductase  51.94 
 
 
260 aa  271  6e-72  Chlorobium luteolum DSM 273  Bacteria  normal  normal 
 
 
-
 
NC_008639  Cpha266_0226  short-chain dehydrogenase/reductase SDR  48.84 
 
 
259 aa  269  2.9999999999999997e-71  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.996462  n/a   
 
 
-
 
NC_011060  Ppha_2686  short-chain dehydrogenase/reductase SDR  51.95 
 
 
258 aa  254  7e-67  Pelodictyon phaeoclathratiforme BU-1  Bacteria  hitchhiker  0.00673203  n/a   
 
 
-
 
NC_007514  Cag_0350  short chain dehydrogenase/reductase family oxidoreductase  47.1 
 
 
259 aa  233  2.0000000000000002e-60  Chlorobium chlorochromatii CaD3  Bacteria  hitchhiker  0.000771311  n/a   
 
 
-
 
NC_010803  Clim_0189  short-chain dehydrogenase/reductase SDR  44.19 
 
 
267 aa  223  4e-57  Chlorobium limicola DSM 245  Bacteria  hitchhiker  0.00000709968  n/a   
 
 
-
 
NC_008312  Tery_1795  short-chain dehydrogenase/reductase SDR  37.85 
 
 
264 aa  170  2e-41  Trichodesmium erythraeum IMS101  Bacteria  normal  0.711928  normal 
 
 
-
 
NC_011726  PCC8801_0140  short-chain dehydrogenase/reductase SDR  39.51 
 
 
261 aa  163  3e-39  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_0137  short-chain dehydrogenase/reductase SDR  39.09 
 
 
261 aa  161  9e-39  Cyanothece sp. PCC 8802  Bacteria  normal  hitchhiker  0.00000076045 
 
 
-
 
NC_010002  Daci_2044  short-chain dehydrogenase/reductase SDR  37.82 
 
 
260 aa  160  3e-38  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.756544 
 
 
-
 
NC_014148  Plim_1352  short-chain dehydrogenase/reductase SDR  33.06 
 
 
271 aa  154  1e-36  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.708878  n/a   
 
 
-
 
NC_010511  M446_3398  short-chain dehydrogenase/reductase SDR  43.16 
 
 
265 aa  154  2e-36  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.162957 
 
 
-
 
NC_011729  PCC7424_4642  short-chain dehydrogenase/reductase SDR  34.15 
 
 
264 aa  153  2e-36  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  0.0000000179752 
 
 
-
 
NC_011884  Cyan7425_1889  short-chain dehydrogenase/reductase SDR  37.73 
 
 
264 aa  152  4e-36  Cyanothece sp. PCC 7425  Bacteria  normal  0.0188274  normal 
 
 
-
 
NC_011729  PCC7424_1836  short-chain dehydrogenase/reductase SDR  36.25 
 
 
260 aa  152  5.9999999999999996e-36  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_013730  Slin_2448  short-chain dehydrogenase/reductase SDR  34.38 
 
 
257 aa  150  2e-35  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_008228  Patl_0906  short-chain dehydrogenase/reductase SDR  34.82 
 
 
273 aa  150  2e-35  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.127379  n/a   
 
 
-
 
NC_013421  Pecwa_1556  short-chain dehydrogenase/reductase SDR  34.69 
 
 
261 aa  147  1.0000000000000001e-34  Pectobacterium wasabiae WPP163  Bacteria  normal  0.596662  n/a   
 
 
-
 
NC_013517  Sterm_2330  short-chain dehydrogenase/reductase SDR  34.55 
 
 
257 aa  147  2.0000000000000003e-34  Sebaldella termitidis ATCC 33386  Bacteria  hitchhiker  0.000620196  n/a   
 
 
-
 
NC_007413  Ava_1011  Short-chain dehydrogenase/reductase SDR  38.18 
 
 
258 aa  147  2.0000000000000003e-34  Anabaena variabilis ATCC 29413  Bacteria  normal  0.968961  hitchhiker  0.00922057 
 
 
-
 
NC_007778  RPB_0113  short-chain dehydrogenase/reductase SDR  38.46 
 
 
259 aa  147  2.0000000000000003e-34  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.886287  normal 
 
 
-
 
NC_008009  Acid345_1611  short-chain dehydrogenase/reductase SDR  34.88 
 
 
262 aa  146  4.0000000000000006e-34  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_2681  short-chain dehydrogenase/reductase SDR  34.98 
 
 
261 aa  145  8.000000000000001e-34  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_3794  short-chain dehydrogenase/reductase SDR  31.76 
 
 
262 aa  144  2e-33  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_013061  Phep_3131  short-chain dehydrogenase/reductase SDR  32.14 
 
 
258 aa  143  3e-33  Pedobacter heparinus DSM 2366  Bacteria  normal  0.859893  normal 
 
 
-
 
NC_011894  Mnod_4423  short-chain dehydrogenase/reductase SDR  36.29 
 
 
276 aa  142  4e-33  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.235547  n/a   
 
 
-
 
NC_013132  Cpin_3329  short-chain dehydrogenase/reductase SDR  34.25 
 
 
256 aa  142  5e-33  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.227726  hitchhiker  0.00265893 
 
 
-
 
NC_013235  Namu_0089  short-chain dehydrogenase/reductase SDR  35.15 
 
 
264 aa  142  5e-33  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_0423  short-chain dehydrogenase/reductase SDR  36.89 
 
 
259 aa  142  8e-33  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.83571  n/a   
 
 
-
 
NC_003295  RSc2321  dehydrogenase/reductase oxidoreductase protein  35.42 
 
 
275 aa  141  9.999999999999999e-33  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.195083 
 
 
-
 
NC_009727  CBUD_1145  short chain dehydrogenase  31.5 
 
 
321 aa  141  9.999999999999999e-33  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_1536  short-chain dehydrogenase/reductase SDR  32.92 
 
 
260 aa  141  9.999999999999999e-33  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_013165  Shel_18580  short-chain dehydrogenase of unknown substrate specificity  31.73 
 
 
258 aa  140  1.9999999999999998e-32  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.489964  normal 
 
 
-
 
NC_010117  COXBURSA331_A1015  short chain dehydrogenase/reductase family oxidoreductase  31.5 
 
 
263 aa  140  1.9999999999999998e-32  Coxiella burnetii RSA 331  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_0689  short-chain dehydrogenase/reductase SDR  38.06 
 
 
259 aa  140  3e-32  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_009784  VIBHAR_05256  short-chain dehydrogenase/reductase SDR  34.02 
 
 
259 aa  140  3e-32  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008255  CHU_3621  short-chain dehydrogenase  31.5 
 
 
258 aa  138  7e-32  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal 
 
 
-
 
NC_008254  Meso_3522  short-chain dehydrogenase/reductase SDR  34.57 
 
 
289 aa  137  1e-31  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_5163  short-chain dehydrogenase/reductase SDR  35.74 
 
 
258 aa  137  2e-31  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_1619  short-chain dehydrogenase/reductase SDR  36.55 
 
 
271 aa  137  2e-31  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.61951 
 
 
-
 
NC_013517  Sterm_1096  short-chain dehydrogenase/reductase SDR  33.2 
 
 
256 aa  135  7.000000000000001e-31  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_3300  short-chain dehydrogenase/reductase SDR  33.2 
 
 
272 aa  135  9e-31  Haliangium ochraceum DSM 14365  Bacteria  normal  0.605078  normal  0.514892 
 
 
-
 
NC_008392  Bamb_6118  short-chain dehydrogenase/reductase SDR  33.75 
 
 
275 aa  135  9e-31  Burkholderia ambifaria AMMD  Bacteria  normal  0.304156  normal  0.200034 
 
 
-
 
NC_004578  PSPTO_4275  oxidoreductase, short-chain dehydrogenase/reductase family  33.33 
 
 
261 aa  134  9.999999999999999e-31  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_006368  lpp1382  hypothetical protein  28.97 
 
 
259 aa  134  1.9999999999999998e-30  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_009565  TBFG_11577  ketoacyl reductase  35.54 
 
 
267 aa  134  1.9999999999999998e-30  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_008262  CPR_2585  short chain dehydrogenase/reductase family oxidoreductase  33.33 
 
 
257 aa  132  5e-30  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_006369  lpl1378  hypothetical protein  28.97 
 
 
259 aa  132  6.999999999999999e-30  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_008255  CHU_2063  short-chain dehydrogenase  33.77 
 
 
261 aa  132  7.999999999999999e-30  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.0247773  normal  0.17766 
 
 
-
 
NC_008255  CHU_2064  oxidoreductase ( short-chain dehydrogenase)  34.53 
 
 
264 aa  132  7.999999999999999e-30  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.694867  normal  0.0846624 
 
 
-
 
NC_010581  Bind_3244  short-chain dehydrogenase/reductase SDR  35.89 
 
 
262 aa  130  2.0000000000000002e-29  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_1572  Short-chain dehydrogenase/reductase SDR  30.61 
 
 
263 aa  129  4.0000000000000003e-29  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.577459 
 
 
-
 
NC_007777  Francci3_0351  short-chain dehydrogenase/reductase SDR  31.17 
 
 
291 aa  129  4.0000000000000003e-29  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_013501  Rmar_1809  short-chain dehydrogenase/reductase SDR  32.94 
 
 
263 aa  129  6e-29  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_0055  short-chain dehydrogenase/reductase SDR  35.63 
 
 
259 aa  129  6e-29  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_1841  short-chain dehydrogenase/reductase SDR  32.56 
 
 
266 aa  128  7.000000000000001e-29  Methylocella silvestris BL2  Bacteria  n/a    normal  0.197421 
 
 
-
 
NC_010511  M446_2996  short-chain dehydrogenase/reductase SDR  35.11 
 
 
268 aa  128  8.000000000000001e-29  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.056073 
 
 
-
 
NC_013440  Hoch_2231  short-chain dehydrogenase/reductase SDR  33.33 
 
 
263 aa  127  2.0000000000000002e-28  Haliangium ochraceum DSM 14365  Bacteria  normal  0.19807  normal 
 
 
-
 
NC_009485  BBta_0274  short chain dehydrogenase/reductase family protein  32.94 
 
 
259 aa  127  2.0000000000000002e-28  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_4109  short-chain dehydrogenase/reductase SDR  32.26 
 
 
269 aa  126  3e-28  Chitinophaga pinensis DSM 2588  Bacteria  normal  hitchhiker  0.00421935 
 
 
-
 
NC_013510  Tcur_2692  short-chain dehydrogenase/reductase SDR  32.64 
 
 
267 aa  127  3e-28  Thermomonospora curvata DSM 43183  Bacteria  decreased coverage  0.0000430049  n/a   
 
 
-
 
NC_013132  Cpin_6133  short-chain dehydrogenase/reductase SDR  38.3 
 
 
263 aa  126  3e-28  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_0244  short-chain dehydrogenase/reductase SDR  33.74 
 
 
258 aa  126  4.0000000000000003e-28  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_013203  Apar_0041  short-chain dehydrogenase/reductase SDR  29.53 
 
 
257 aa  126  4.0000000000000003e-28  Atopobium parvulum DSM 20469  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_4315  short-chain dehydrogenase/reductase SDR  32.13 
 
 
267 aa  125  5e-28  Mycobacterium sp. JLS  Bacteria  normal  normal  0.294207 
 
 
-
 
NC_009675  Anae109_3974  short-chain dehydrogenase/reductase SDR  34.14 
 
 
264 aa  125  7e-28  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.036497  normal  0.609933 
 
 
-
 
NC_013159  Svir_38500  short-chain dehydrogenase of unknown substrate specificity  34.92 
 
 
253 aa  125  8.000000000000001e-28  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_3113  short-chain dehydrogenase/reductase SDR  33.06 
 
 
262 aa  125  9e-28  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.999856 
 
 
-
 
NC_013510  Tcur_3579  short-chain dehydrogenase/reductase SDR  39.01 
 
 
258 aa  124  1e-27  Thermomonospora curvata DSM 43183  Bacteria  normal  0.392131  n/a   
 
 
-
 
NC_014248  Aazo_3911  short-chain dehydrogenase/reductase SDR  30.2 
 
 
267 aa  124  1e-27  'Nostoc azollae' 0708  Bacteria  normal  0.322734  n/a   
 
 
-
 
NC_009636  Smed_1269  short-chain dehydrogenase/reductase SDR  30.36 
 
 
294 aa  124  2e-27  Sinorhizobium medicae WSM419  Bacteria  normal  0.618635  normal  0.87927 
 
 
-
 
NC_007964  Nham_0606  short-chain dehydrogenase/reductase SDR  35.06 
 
 
256 aa  124  2e-27  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_009718  Fnod_0523  short-chain dehydrogenase/reductase SDR  31.3 
 
 
255 aa  124  2e-27  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1475  short-chain dehydrogenase/reductase SDR  29.72 
 
 
269 aa  123  3e-27  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_08440  putative short chain alcohol dehydrogenase  33.59 
 
 
266 aa  123  3e-27  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.0000000229698 
 
 
-
 
NC_008705  Mkms_4161  short-chain dehydrogenase/reductase SDR  32.13 
 
 
267 aa  122  4e-27  Mycobacterium sp. KMS  Bacteria  normal  0.209625  normal 
 
 
-
 
NC_008146  Mmcs_4085  short-chain dehydrogenase/reductase SDR  32.13 
 
 
267 aa  122  4e-27  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_012792  Vapar_6207  short-chain dehydrogenase/reductase SDR  31.15 
 
 
277 aa  122  5e-27  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_8408  short-chain dehydrogenase/reductase SDR  41.15 
 
 
254 aa  122  6e-27  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.485174  normal 
 
 
-
 
NC_007951  Bxe_A4474  putative short-chain dehydrogenase/reductase SDR  33.48 
 
 
270 aa  122  6e-27  Burkholderia xenovorans LB400  Bacteria  normal  hitchhiker  0.000662369 
 
 
-
 
NC_010571  Oter_2864  short-chain dehydrogenase/reductase SDR  31.46 
 
 
289 aa  122  6e-27  Opitutus terrae PB90-1  Bacteria  normal  normal  0.327148 
 
 
-
 
NC_009338  Mflv_3538  short-chain dehydrogenase/reductase SDR  35.75 
 
 
259 aa  122  7e-27  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.0177311  normal  0.151964 
 
 
-
 
NC_013515  Smon_1006  short-chain dehydrogenase/reductase SDR  30.36 
 
 
257 aa  122  8e-27  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_011729  PCC7424_4855  short-chain dehydrogenase/reductase SDR  28.34 
 
 
274 aa  122  8e-27  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_009656  PSPA7_0799  short chain dehydrogenase/reductase family oxidoreductase  33.72 
 
 
266 aa  121  9.999999999999999e-27  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_2906  short chain dehydrogenase/reductase family oxidoreductase  31.25 
 
 
257 aa  121  9.999999999999999e-27  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_2814  short-chain dehydrogenase/reductase SDR  34.05 
 
 
260 aa  120  1.9999999999999998e-26  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.563613  normal 
 
 
-
 
NC_013510  Tcur_1833  short-chain dehydrogenase/reductase SDR  37.5 
 
 
252 aa  120  1.9999999999999998e-26  Thermomonospora curvata DSM 43183  Bacteria  normal  0.092001  n/a   
 
 
-
 
NC_010681  Bphyt_3970  short-chain dehydrogenase/reductase SDR  32.5 
 
 
270 aa  120  1.9999999999999998e-26  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007760  Adeh_3849  short-chain dehydrogenase/reductase SDR  39.57 
 
 
292 aa  120  1.9999999999999998e-26  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.858349  n/a   
 
 
-
 
NC_008146  Mmcs_0188  short-chain dehydrogenase/reductase SDR  37.7 
 
 
262 aa  120  1.9999999999999998e-26  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_6469  short-chain dehydrogenase/reductase SDR  31.75 
 
 
263 aa  120  1.9999999999999998e-26  Frankia sp. EAN1pec  Bacteria  normal  normal  0.0477636 
 
 
-
 
NC_014165  Tbis_2195  short-chain dehydrogenase/reductase SDR  34.43 
 
 
250 aa  120  1.9999999999999998e-26  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.92313 
 
 
-
 
NC_013421  Pecwa_2365  short-chain dehydrogenase/reductase SDR  38.22 
 
 
257 aa  120  1.9999999999999998e-26  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0197  short-chain dehydrogenase/reductase SDR  37.7 
 
 
262 aa  120  1.9999999999999998e-26  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_0177  short-chain dehydrogenase/reductase SDR  37.7 
 
 
262 aa  120  3e-26  Mycobacterium sp. JLS  Bacteria  normal  normal  0.721122 
 
 
-
 
NC_007908  Rfer_0310  short-chain dehydrogenase/reductase SDR  30.65 
 
 
284 aa  120  3e-26  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_013202  Hmuk_1178  short-chain dehydrogenase/reductase SDR  31.78 
 
 
259 aa  120  3e-26  Halomicrobium mukohataei DSM 12286  Archaea  normal  0.82399  normal 
 
 
-
 
NC_010085  Nmar_0044  short-chain dehydrogenase/reductase SDR  32.44 
 
 
264 aa  119  4.9999999999999996e-26  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>