12 homologs were found in PanDaTox collection
for query gene Cphamn1_0028 on replicon NC_010831
Organism: Chlorobium phaeobacteroides BS1



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010831  Cphamn1_0028  ATP-dependent Clp protease adaptor protein ClpS  100 
 
 
101 aa  209  1e-53  Chlorobium phaeobacteroides BS1  Bacteria  normal  0.0842094  normal  0.917965 
 
 
-
 
NC_011059  Paes_0047  ATP-dependent Clp protease adaptor protein ClpS  67.33 
 
 
101 aa  149  2e-35  Prosthecochloris aestuarii DSM 271  Bacteria  normal  normal 
 
 
-
 
NC_011060  Ppha_0045  ATP-dependent Clp protease adaptor protein ClpS  69.07 
 
 
105 aa  136  8.999999999999999e-32  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_008639  Cpha266_0046  ATP-dependent Clp protease adaptor protein ClpS  67.02 
 
 
105 aa  132  1.9999999999999998e-30  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_010803  Clim_0026  ATP-dependent Clp protease adaptor protein ClpS  77.63 
 
 
102 aa  129  9e-30  Chlorobium limicola DSM 245  Bacteria  normal  n/a   
 
 
-
 
NC_007512  Plut_0018  hypothetical protein  67.95 
 
 
109 aa  114  3.9999999999999997e-25  Chlorobium luteolum DSM 273  Bacteria  normal  normal  0.313448 
 
 
-
 
NC_007514  Cag_2017  hypothetical protein  54.74 
 
 
118 aa  110  8.000000000000001e-24  Chlorobium chlorochromatii CaD3  Bacteria  normal  0.870487  n/a   
 
 
-
 
NC_013501  Rmar_1993  ATP-dependent Clp protease adaptor protein ClpS  48.89 
 
 
104 aa  89.7  1e-17  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_013061  Phep_0222  ATP-dependent Clp protease adaptor protein ClpS  38.1 
 
 
93 aa  49.7  0.00001  Pedobacter heparinus DSM 2366  Bacteria  normal  0.413672  normal 
 
 
-
 
NC_013525  Tter_1380  ATP-dependent Clp protease adaptor protein ClpS  34.33 
 
 
101 aa  46.2  0.0001  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_010571  Oter_2796  ATP-dependent Clp protease adaptor protein ClpS  33.33 
 
 
107 aa  41.2  0.005  Opitutus terrae PB90-1  Bacteria  normal  0.366764  normal  0.0194317 
 
 
-
 
BN001302  ANIA_03923  ubiquitin-protein ligase E3 component (UBR1), putative (AFU_orthologue; AFUA_6G08420)  32.88 
 
 
2159 aa  41.2  0.006  Aspergillus nidulans FGSC A4  Eukaryota  normal  0.362385  normal  0.693019 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>