9 homologs were found in PanDaTox collection
for query gene Coch_0028 on replicon NC_013162
Organism: Capnocytophaga ochracea DSM 7271



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013162  Coch_0028  conserved hypothetical membrane spanning protein  100 
 
 
147 aa  293  6e-79  Capnocytophaga ochracea DSM 7271  Bacteria  normal  0.0903727  n/a   
 
 
-
 
NC_013441  Gbro_3467  hypothetical protein  37.07 
 
 
168 aa  71.6  0.000000000003  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_21130  hypothetical protein  28.47 
 
 
175 aa  68.9  0.00000000002  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.61417  normal  0.0607803 
 
 
-
 
NC_008254  Meso_0938  hypothetical protein  33.33 
 
 
173 aa  68.2  0.00000000003  Chelativorans sp. BNC1  Bacteria  normal  0.299017  n/a   
 
 
-
 
NC_009727  CBUD_2164  hypothetical membrane spanning protein  36.29 
 
 
160 aa  68.6  0.00000000003  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  n/a   
 
 
-
 
NC_010117  COXBURSA331_A0014  hypothetical protein  36.29 
 
 
160 aa  68.6  0.00000000003  Coxiella burnetii RSA 331  Bacteria  normal  n/a   
 
 
-
 
NC_011666  Msil_2438  hypothetical protein  33.33 
 
 
164 aa  52  0.000003  Methylocella silvestris BL2  Bacteria  n/a    normal  0.0160218 
 
 
-
 
NC_009565  TBFG_11767  hypothetical protein  32.65 
 
 
185 aa  50.4  0.000009  Mycobacterium tuberculosis F11  Bacteria  normal  hitchhiker  0.000010314 
 
 
-
 
NC_007513  Syncc9902_2113  hypothetical protein  25.23 
 
 
168 aa  43.1  0.001  Synechococcus sp. CC9902  Bacteria  normal  0.441224  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>